RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B GLO1P50107 326 aa1.76□□□□□ -2.13
snR39BsnR39B PSP2P50109 593 aaKnown RBP1.76□□□□□ -2.13
snR39BsnR39B DMA2P53924 522 aa1.76□□□□□ -2.13
snR39BsnR39B ENA2Q01896 1091 aa1.76□□□□□ -2.13
snR39BsnR39B RNT1Q02555 471 aa1.76□□□□□ -2.13
snR39BsnR39B DAL4Q04895 635 aa1.76□□□□□ -2.13
snR39BsnR39B HBT1Q07653 1046 aaKnown RBP1.76□□□□□ -2.13
snR39BsnR39B KCS1Q12494 1050 aa1.76□□□□□ -2.13
snR39BsnR39B ENA5Q12691 1091 aa1.76□□□□□ -2.13
snR39BsnR39B DED1P06634 604 aaKnown RBP1.75□□□□□ -2.13
snR39BsnR39B GFA1P14742 717 aaKnown RBP1.75□□□□□ -2.13
snR39BsnR39B IMO32P53219 342 aa1.75□□□□□ -2.13
snR39BsnR39B NPC2Q12408 173 aa1.75□□□□□ -2.13
snR39BsnR39B FRT1Q99332 602 aa1.75□□□□□ -2.13
snR39BsnR39B PPR1P07272 904 aaPredicted RBP1.74□□□□□ -2.13
snR39BsnR39B BAS1P22035 811 aa1.74□□□□□ -2.13
snR39BsnR39B GEM1P39722 662 aa1.74□□□□□ -2.13
snR39BsnR39B DAS1P47005 663 aa1.74□□□□□ -2.13
snR39BsnR39B GND2P53319 492 aa1.74□□□□□ -2.13
snR39BsnR39B TOS4Q06266 489 aa1.74□□□□□ -2.13
snR39BsnR39B TRP4P07285 380 aaPredicted RBP1.73□□□□□ -2.13
snR39BsnR39B YER152CP10356 443 aa1.73□□□□□ -2.13
snR39BsnR39B HCA4P20448 770 aaKnown RBP1.73□□□□□ -2.13
snR39BsnR39B UGA2P38067 497 aa1.73□□□□□ -2.13
snR39BsnR39B GRS1P38088 690 aaKnown RBP1.73□□□□□ -2.13
snR39BsnR39B CCC2P38995 1004 aa1.73□□□□□ -2.13
snR39BsnR39B YGR012WP53206 393 aa1.73□□□□□ -2.13
snR39BsnR39B YPL109CQ02981 657 aa1.73□□□□□ -2.13
snR39BsnR39B YMR206WQ03695 313 aa1.73□□□□□ -2.13
snR39BsnR39B NUT2Q06213 157 aa1.73□□□□□ -2.13
snR39BsnR39B ACM1Q08981 209 aa1.73□□□□□ -2.13
snR39BsnR39B SPE1P08432 466 aa1.72□□□□□ -2.13
snR39BsnR39B TUB1P09733 447 aaKnown RBP1.72□□□□□ -2.13
snR39BsnR39B CAD1P24813 409 aaKnown RBP1.72□□□□□ -2.13
snR39BsnR39B KAR4P25583 335 aa1.72□□□□□ -2.13
snR39BsnR39B PEX2P32800 271 aa1.72□□□□□ -2.13
snR39BsnR39B PPZ2P33329 710 aa1.72□□□□□ -2.13
snR39BsnR39B GEF1P37020 779 aa1.72□□□□□ -2.13
snR39BsnR39B SDS3P40505 327 aa1.72□□□□□ -2.13
snR39BsnR39B URM1P40554 99 aaPredicted RBP1.72□□□□□ -2.13
snR39BsnR39B MDJ2P42834 146 aa1.72□□□□□ -2.13
snR39BsnR39B CNN1P43618 361 aa1.72□□□□□ -2.13
snR39BsnR39B SIW14P53965 281 aa1.72□□□□□ -2.13
snR39BsnR39B SUB2Q07478 446 aaKnown RBP1.72□□□□□ -2.13
snR39BsnR39B OSW2Q12202 724 aa1.72□□□□□ -2.13
snR39BsnR39B BI4P03879 638 aa1.71□□□□□ -2.14
snR39BsnR39B ALG7P07286 448 aa1.71□□□□□ -2.14
snR39BsnR39B HSF1P10961 833 aa1.71□□□□□ -2.14
snR39BsnR39B MDM10P18409 493 aa1.71□□□□□ -2.14
snR39BsnR39B CDC43P18898 376 aa1.71□□□□□ -2.14
snR39BsnR39B SYP1P25623 870 aaKnown RBP1.71□□□□□ -2.14
snR39BsnR39B MLS1P30952 554 aa1.71□□□□□ -2.14
snR39BsnR39B MKK2P32491 506 aa1.71□□□□□ -2.14
snR39BsnR39B YHL017WP38745 532 aa1.71□□□□□ -2.14
snR39BsnR39B BUL1P48524 976 aa1.71□□□□□ -2.14
snR39BsnR39B HFM1P51979 1187 aa1.71□□□□□ -2.14
snR39BsnR39B NCS6P53088 359 aa1.71□□□□□ -2.14
snR39BsnR39B RAT1Q02792 1006 aaKnown RBP1.71□□□□□ -2.14
snR39BsnR39B MSL5Q12186 476 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
snR39BsnR39B LAS17Q12446 633 aa1.71□□□□□ -2.14
snR39BsnR39B DBP5P20449 482 aaKnown RBP1.7□□□□□ -2.14
snR39BsnR39B PRE9P23638 258 aaKnown RBP1.7□□□□□ -2.14
snR39BsnR39B YUR1P26725 428 aa1.7□□□□□ -2.14
snR39BsnR39B YAP1801P38856 637 aa1.7□□□□□ -2.14
snR39BsnR39B RIX1P38883 763 aaPredicted RBP1.7□□□□□ -2.14
snR39BsnR39B SCS3P53012 380 aa1.7□□□□□ -2.14
snR39BsnR39B GNT1Q12096 491 aa1.7□□□□□ -2.14
snR39BsnR39B PHO4P07270 312 aaKnown RBP1.69□□□□□ -2.14
snR39BsnR39B ERP5P38819 212 aa1.69□□□□□ -2.14
snR39BsnR39B PIC2P40035 300 aa1.69□□□□□ -2.14
snR39BsnR39B YIL166CP40445 542 aa1.69□□□□□ -2.14
snR39BsnR39B ROD1Q02805 837 aa1.69□□□□□ -2.14
snR39BsnR39B MUK1Q02866 612 aa1.69□□□□□ -2.14
snR39BsnR39B MRH1Q12117 320 aaPredicted RBP1.69□□□□□ -2.14
snR39BsnR39B MCD1Q12158 566 aa1.69□□□□□ -2.14
snR39BsnR39B YLL058WQ12198 575 aa1.69□□□□□ -2.14
snR39BsnR39B RPL11AP0C0W9 174 aaKnown RBP1.68□□□□□ -2.14
snR39BsnR39B SEC8P32855 1065 aa1.68□□□□□ -2.14
snR39BsnR39B SLA2P33338 968 aa1.68□□□□□ -2.14
snR39BsnR39B TDP1P38319 544 aa1.68□□□□□ -2.14
snR39BsnR39B MRPS18P42847 217 aa1.68□□□□□ -2.14
snR39BsnR39B CDA1Q06702 301 aa1.68□□□□□ -2.14
snR39BsnR39B RPL11BQ3E757 174 aaPredicted RBP1.68□□□□□ -2.14
snR39BsnR39B BNR1P40450 1375 aa1.68□□□□□ -2.14
snR39BsnR39B MET3P08536 511 aa1.67□□□□□ -2.14
snR39BsnR39B SED4P25365 1065 aa1.67□□□□□ -2.14
snR39BsnR39B RPC82P32349 654 aa1.67□□□□□ -2.14
snR39BsnR39B MXR1P40029 184 aa1.67□□□□□ -2.14
snR39BsnR39B MPH1P40562 993 aa1.67□□□□□ -2.14
snR39BsnR39B STB2P46679 850 aa1.67□□□□□ -2.14
snR39BsnR39B ARO10Q06408 635 aa1.67□□□□□ -2.14
snR39BsnR39B YBL113CQ7M4S9 792 aa1.67□□□□□ -2.14
snR39BsnR39B HXK1P04806 485 aaKnown RBP1.66□□□□□ -2.14
snR39BsnR39B CDC3P32457 520 aaKnown RBP1.66□□□□□ -2.14
snR39BsnR39B RGT1P32862 1170 aa1.66□□□□□ -2.14
snR39BsnR39B SRP101P32916 621 aa1.66□□□□□ -2.14
snR39BsnR39B ECM21P38167 1117 aaKnown RBP1.66□□□□□ -2.14
snR39BsnR39B FAA3P39002 694 aa1.66□□□□□ -2.14
snR39BsnR39B VPS73P53142 486 aaKnown RBP1.66□□□□□ -2.14
snR39BsnR39B MRPS35P53292 345 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 244.7 ms