RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W CIT3P43635 486 aa7.63□□□□□ -1.19
PRE2YPR103W DOS2P54858 310 aa7.63□□□□□ -1.19
PRE2YPR103W DUS3Q06053 668 aaKnown RBP7.63□□□□□ -1.19
PRE2YPR103W PHO8P11491 566 aa7.62□□□□□ -1.19
PRE2YPR103W PEX7P39108 375 aa7.62□□□□□ -1.19
PRE2YPR103W HUL4P40985 892 aa7.62□□□□□ -1.19
PRE2YPR103W RCM1P53972 490 aa7.62□□□□□ -1.19
PRE2YPR103W PRO1P32264 428 aa7.61□□□□□ -1.19
PRE2YPR103W CDC12P32468 407 aaKnown RBP7.61□□□□□ -1.19
PRE2YPR103W UGA2P38067 497 aa7.61□□□□□ -1.19
PRE2YPR103W YBR284WP38150 797 aa7.61□□□□□ -1.19
PRE2YPR103W COQ4O13525 335 aa7.6□□□□□ -1.19
PRE2YPR103W AAR2P32357 355 aaPredicted RBP7.6□□□□□ -1.19
PRE2YPR103W COQ2P32378 372 aa7.6□□□□□ -1.19
PRE2YPR103W AFR1P33304 620 aa7.6□□□□□ -1.19
PRE2YPR103W PIK1P39104 1066 aa7.6□□□□□ -1.19
PRE2YPR103W MSB1P21339 1137 aaKnown RBP7.59□□□□□ -1.19
PRE2YPR103W SRO9P25567 434 aaKnown RBP7.59□□□□□ -1.19
PRE2YPR103W MTC3P53077 123 aa7.59□□□□□ -1.19
PRE2YPR103W YOR059CQ08448 450 aaKnown RBP7.59□□□□□ -1.19
PRE2YPR103W YLR125WQ12138 136 aa7.59□□□□□ -1.19
PRE2YPR103W PUS1Q12211 544 aaKnown RBP7.59□□□□□ -1.19
PRE2YPR103W BI4P03879 638 aa7.58□□□□□ -1.2
PRE2YPR103W MET6P05694 767 aaKnown RBP7.58□□□□□ -1.2
PRE2YPR103W MDL2P33311 773 aa7.58□□□□□ -1.2
PRE2YPR103W ERT1P38140 529 aa7.58□□□□□ -1.2
PRE2YPR103W SIT1P39980 628 aa7.58□□□□□ -1.2
PRE2YPR103W BUL2Q03758 920 aaKnown RBP7.58□□□□□ -1.2
PRE2YPR103W YDL124WQ07551 312 aaKnown RBP7.58□□□□□ -1.2
PRE2YPR103W RSC58Q07979 502 aa7.58□□□□□ -1.2
PRE2YPR103W YPR071WQ12346 211 aa7.58□□□□□ -1.2
PRE2YPR103W CHS2P14180 963 aa7.57□□□□□ -1.2
PRE2YPR103W MSD1P15179 658 aaKnown RBP7.57□□□□□ -1.2
PRE2YPR103W NPP1P25353 742 aa7.57□□□□□ -1.2
PRE2YPR103W CCT8P47079 568 aaKnown RBP7.57□□□□□ -1.2
PRE2YPR103W MAL11P53048 616 aa7.57□□□□□ -1.2
PRE2YPR103W TRE1Q08919 783 aa7.57□□□□□ -1.2
PRE2YPR103W GCD1P09032 578 aaPredicted RBP7.56□□□□□ -1.2
PRE2YPR103W THI4P32318 326 aa7.56□□□□□ -1.2
PRE2YPR103W PPH3P32345 308 aa7.56□□□□□ -1.2
PRE2YPR103W SAH1P39954 449 aaKnown RBP7.56□□□□□ -1.2
PRE2YPR103W NPP2P39997 493 aa7.56□□□□□ -1.2
PRE2YPR103W KAE1P36132 386 aa7.55□□□□□ -1.2
PRE2YPR103W PET10P36139 283 aa7.55□□□□□ -1.2
PRE2YPR103W YRO2P38079 344 aa7.55□□□□□ -1.2
PRE2YPR103W CCZ1P38273 704 aa7.55□□□□□ -1.2
PRE2YPR103W YGR130CP53278 816 aa7.55□□□□□ -1.2
PRE2YPR103W SRP1Q02821 542 aaKnown RBP7.55□□□□□ -1.2
PRE2YPR103W CDC11P32458 415 aa7.54□□□□□ -1.2
PRE2YPR103W GDH3P39708 457 aa7.54□□□□□ -1.2
PRE2YPR103W GTS1P40956 396 aa7.54□□□□□ -1.2
PRE2YPR103W MDM38Q08179 573 aa7.54□□□□□ -1.2
PRE2YPR103W TRP3P00937 484 aa7.53□□□□□ -1.2
PRE2YPR103W ABZ1P37254 787 aaPredicted RBP7.53□□□□□ -1.2
PRE2YPR103W PTC7P38797 343 aa7.53□□□□□ -1.2
PRE2YPR103W TOK1P40310 691 aa7.53□□□□□ -1.2
PRE2YPR103W UBP6P43593 499 aaKnown RBP7.53□□□□□ -1.2
PRE2YPR103W TPO2P53283 614 aa7.53□□□□□ -1.2
PRE2YPR103W SSY1Q03770 852 aa7.53□□□□□ -1.2
PRE2YPR103W ATG13Q06628 738 aa7.53□□□□□ -1.2
PRE2YPR103W YLL058WQ12198 575 aa7.53□□□□□ -1.2
PRE2YPR103W ADE8P04161 214 aa7.52□□□□□ -1.21
PRE2YPR103W MSH2P25847 964 aa7.52□□□□□ -1.21
PRE2YPR103W DOM34P33309 386 aa7.52□□□□□ -1.21
PRE2YPR103W GIC1P38785 314 aa7.52□□□□□ -1.21
PRE2YPR103W MNN1P39106 762 aa7.52□□□□□ -1.21
PRE2YPR103W THS1P04801 734 aaKnown RBP7.51□□□□□ -1.21
PRE2YPR103W TOM70P07213 617 aaKnown RBP7.51□□□□□ -1.21
PRE2YPR103W ACE2P21192 770 aa7.51□□□□□ -1.21
PRE2YPR103W TSL1P38427 1098 aaKnown RBP7.51□□□□□ -1.21
PRE2YPR103W HFM1P51979 1187 aa7.51□□□□□ -1.21
PRE2YPR103W LCD1Q04377 747 aa7.51□□□□□ -1.21
PRE2YPR103W GYP7P48365 746 aa7.5□□□□□ -1.21
PRE2YPR103W HSV2P50079 448 aaPredicted RBP7.5□□□□□ -1.21
PRE2YPR103W SRT1Q03175 343 aa7.5□□□□□ -1.21
PRE2YPR103W RSB1Q08417 382 aa7.5□□□□□ -1.21
PRE2YPR103W CYC7P00045 113 aa7.49□□□□□ -1.21
PRE2YPR103W AIM26P32858 118 aa7.49□□□□□ -1.21
PRE2YPR103W YKR073CP36153 106 aa7.49□□□□□ -1.21
PRE2YPR103W RRT14P40470 206 aa7.49□□□□□ -1.21
PRE2YPR103W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.49□□□□□ -1.21not detected
PRE2YPR103W POB3Q04636 552 aaKnown RBP7.49□□□□□ -1.21
PRE2YPR103W NTG2Q08214 380 aa7.49□□□□□ -1.21
PRE2YPR103W SVS1Q12254 260 aa7.49□□□□□ -1.21
PRE2YPR103W LPX1Q12405 387 aaKnown RBP7.49□□□□□ -1.21
PRE2YPR103W FPR3P38911 411 aaKnown RBP7.48□□□□□ -1.21
PRE2YPR103W SFB2P53953 876 aa7.48□□□□□ -1.21
PRE2YPR103W SDH1Q00711 640 aa7.48□□□□□ -1.21
PRE2YPR103W XYL2Q07993 356 aa7.48□□□□□ -1.21
PRE2YPR103W NBA1Q08229 501 aaKnown RBP7.48□□□□□ -1.21
PRE2YPR103W MEF1P25039 761 aa7.46□□□□□ -1.22
PRE2YPR103W REC104P33323 182 aa7.46□□□□□ -1.22
PRE2YPR103W YJR142WP47173 342 aa7.46□□□□□ -1.22
PRE2YPR103W YKE2P52553 114 aa7.46□□□□□ -1.22
PRE2YPR103W RIB2Q12362 591 aaKnown RBP7.46□□□□□ -1.22
PRE2YPR103W NSI1Q12457 570 aa7.46□□□□□ -1.22
PRE2YPR103W ADP1P25371 1049 aa7.45□□□□□ -1.22
PRE2YPR103W FUN30P31380 1131 aa7.45□□□□□ -1.22
PRE2YPR103W YKR078WP36158 585 aaKnown RBP7.45□□□□□ -1.22
PRE2YPR103W YBR238CP38330 731 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 5,963 RNA–protein pairs in 54.3 ms