RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C RPC31P17890 251 aa8.21□□□□□ -1.1
UME1YPL139C PWP2P25635 923 aaKnown RBP8.21□□□□□ -1.1
UME1YPL139C CLB5P30283 435 aa8.21□□□□□ -1.1
UME1YPL139C DUR3P33413 735 aa8.21□□□□□ -1.1
UME1YPL139C GPD2P41911 440 aaKnown RBP8.21□□□□□ -1.1
UME1YPL139C SGM1P47166 707 aa8.21□□□□□ -1.1
UME1YPL139C MSC2Q03455 724 aa8.21□□□□□ -1.1
UME1YPL139C YLL058WQ12198 575 aa8.21□□□□□ -1.1
UME1YPL139C ILV1P00927 576 aaKnown RBP8.2□□□□□ -1.1
UME1YPL139C ORC6P38826 435 aa8.2□□□□□ -1.1
UME1YPL139C BNI5P53890 448 aaKnown RBP8.2□□□□□ -1.1
UME1YPL139C GPI13Q07830 1017 aa8.2□□□□□ -1.1
UME1YPL139C UBR2Q07963 1872 aa8.2□□□□□ -1.1
UME1YPL139C ATG32P40458 529 aa8.19□□□□□ -1.1
UME1YPL139C FOL2P51601 243 aaKnown RBP8.19□□□□□ -1.1
UME1YPL139C DSE4P53753 1117 aa8.19□□□□□ -1.1
UME1YPL139C CRD1Q07560 283 aa8.19□□□□□ -1.1
UME1YPL139C DCS2Q12123 353 aa8.19□□□□□ -1.1
UME1YPL139C SES1P07284 462 aaKnown RBP8.18□□□□□ -1.1
UME1YPL139C RNR2P09938 399 aaKnown RBP8.18□□□□□ -1.1
UME1YPL139C SUP45P12385 437 aaKnown RBP8.18□□□□□ -1.1
UME1YPL139C TVP38P36164 337 aa8.18□□□□□ -1.1
UME1YPL139C RET3P53600 189 aa8.18□□□□□ -1.1
UME1YPL139C NAF1P53919 492 aaKnown RBP8.18□□□□□ -1.1
UME1YPL139C TRS120Q04183 1289 aa8.18□□□□□ -1.1
UME1YPL139C GYP1Q08484 637 aa8.18□□□□□ -1.1
UME1YPL139C PGK1P00560 416 aaKnown RBP8.17□□□□□ -1.1
UME1YPL139C HEM1P09950 548 aaPredicted RBP8.17□□□□□ -1.1
UME1YPL139C SNA3P14359 133 aa8.17□□□□□ -1.1
UME1YPL139C CBP3P21560 335 aa8.17□□□□□ -1.1
UME1YPL139C RAM1P22007 431 aa8.17□□□□□ -1.1
UME1YPL139C SUV3P32580 737 aa8.17□□□□□ -1.1
UME1YPL139C OPY1P38271 328 aa8.17□□□□□ -1.1
UME1YPL139C STT3P39007 718 aaKnown RBP8.17□□□□□ -1.1
UME1YPL139C ULP2P40537 1034 aaPredicted RBP8.17□□□□□ -1.1
UME1YPL139C GET3Q12154 354 aaKnown RBP8.17□□□□□ -1.1
UME1YPL139C CPA2P03965 1118 aaKnown RBP8.16□□□□□ -1.1
UME1YPL139C SMY2P32909 740 aaKnown RBP8.16□□□□□ -1.1
UME1YPL139C SIS2P36024 562 aa8.16□□□□□ -1.1
UME1YPL139C NPA3P47122 385 aa8.16□□□□□ -1.1
UME1YPL139C YGR153WP48238 217 aa8.16□□□□□ -1.1
UME1YPL139C RLF2Q12495 606 aa8.16□□□□□ -1.1
UME1YPL139C PTC5Q12511 572 aa8.16□□□□□ -1.1
UME1YPL139C HSP82P02829 709 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C DED1P06634 604 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C PRP22P24384 1145 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C SRO9P25567 434 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C IRE1P32361 1115 aa8.15□□□□□ -1.1
UME1YPL139C SAS3P34218 831 aa8.15□□□□□ -1.1
UME1YPL139C YHL017WP38745 532 aa8.15□□□□□ -1.1
UME1YPL139C YEL025CP39991 1188 aa8.15□□□□□ -1.1
UME1YPL139C HMF1P40037 129 aaKnown RBP8.15□□□□□ -1.1
UME1YPL139C BUD6P41697 788 aa8.15□□□□□ -1.1
UME1YPL139C DMA2P53924 522 aa8.15□□□□□ -1.1
UME1YPL139C MFM1Q02783 413 aa8.15□□□□□ -1.1
UME1YPL139C EAR1Q03212 550 aa8.15□□□□□ -1.1
UME1YPL139C PHM6Q05637 104 aa8.15□□□□□ -1.1
UME1YPL139C RIF1P29539 1916 aa8.15□□□□□ -1.1
UME1YPL139C CDC48P25694 835 aaKnown RBP8.14□□□□□ -1.11
UME1YPL139C BRL1P38770 471 aa8.14□□□□□ -1.11
UME1YPL139C PSP2P50109 593 aaKnown RBP8.14□□□□□ -1.11
UME1YPL139C VPS20Q04272 221 aa8.14□□□□□ -1.11
UME1YPL139C SLK19Q08581 821 aaKnown RBP8.14□□□□□ -1.11
UME1YPL139C CLN3P13365 580 aa8.13□□□□□ -1.11
UME1YPL139C THR4P16120 514 aaKnown RBP8.13□□□□□ -1.11
UME1YPL139C GSY1P23337 708 aa8.13□□□□□ -1.11
UME1YPL139C FIS1P40515 155 aa8.13□□□□□ -1.11
UME1YPL139C ZPR1P53303 486 aaKnown RBP8.13□□□□□ -1.11
UME1YPL139C RPL19AP0CX82 189 aaKnown RBP8.12□□□□□ -1.11
UME1YPL139C RPL19BP0CX83 189 aaPredicted RBP8.12□□□□□ -1.11
UME1YPL139C PGM1P33401 570 aaKnown RBP8.12□□□□□ -1.11
UME1YPL139C RFC5P38251 354 aa8.12□□□□□ -1.11
UME1YPL139C PGA2P53903 129 aa8.12□□□□□ -1.11
UME1YPL139C CUS1Q02554 436 aaPredicted RBP8.12□□□□□ -1.11
UME1YPL139C ADY4Q05955 493 aa8.12□□□□□ -1.11
UME1YPL139C ELG1Q12050 791 aa8.12□□□□□ -1.11
UME1YPL139C YPL150WQ12152 901 aa8.12□□□□□ -1.11
UME1YPL139C CEX1Q12453 761 aa8.12□□□□□ -1.11
UME1YPL139C TUF1P02992 437 aaKnown RBP8.11□□□□□ -1.11
UME1YPL139C YEL076C-AP0CX16 216 aa8.11□□□□□ -1.11
UME1YPL139C YLR464WP0CX17 216 aa8.11□□□□□ -1.11
UME1YPL139C MBR1P23493 339 aa8.11□□□□□ -1.11
UME1YPL139C URA1P28272 314 aaPredicted RBP8.11□□□□□ -1.11
UME1YPL139C RME1P32338 300 aaKnown RBP8.11□□□□□ -1.11
UME1YPL139C POA1P38218 177 aa8.11□□□□□ -1.11
UME1YPL139C ERC1P38767 581 aa8.11□□□□□ -1.11
UME1YPL139C YEL076CP39971 216 aa8.11□□□□□ -1.11
UME1YPL139C JHD1P40034 492 aa8.11□□□□□ -1.11
UME1YPL139C HUL5P53119 910 aa8.11□□□□□ -1.11
UME1YPL139C YML020WQ03722 664 aa8.11□□□□□ -1.11
UME1YPL139C CSM3Q04659 317 aa8.11□□□□□ -1.11
UME1YPL139C SVF1Q05515 481 aa8.11□□□□□ -1.11
UME1YPL139C COQ9Q05779 260 aa8.11□□□□□ -1.11
UME1YPL139C UBC1P21734 215 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C GBP2P25555 427 aaKnown RBP RIP-Chip data8.1□□□□□ -1.11not detected
UME1YPL139C GAR1P28007 205 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C EFT1P32324 842 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C MSS51P32335 436 aa8.1□□□□□ -1.11
UME1YPL139C MSC7P38694 644 aa8.1□□□□□ -1.11
UME1YPL139C PIH1P38768 344 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms