RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W RDS1P25611 832 aa7.48□□□□□ -1.21
LSC1YOR142W POT1P27796 417 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
LSC1YOR142W URA1P28272 314 aaPredicted RBP7.48□□□□□ -1.21
LSC1YOR142W DUR3P33413 735 aa7.48□□□□□ -1.21
LSC1YOR142W GRS1P38088 690 aaKnown RBP7.48□□□□□ -1.21
LSC1YOR142W TVP23P38962 199 aa7.48□□□□□ -1.21
LSC1YOR142W ULP2P40537 1034 aaPredicted RBP7.48□□□□□ -1.21
LSC1YOR142W AZR1P50080 613 aa7.48□□□□□ -1.21
LSC1YOR142W CNM67P53865 581 aaKnown RBP7.48□□□□□ -1.21
LSC1YOR142W SVF1Q05515 481 aa7.48□□□□□ -1.21
LSC1YOR142W PGI1P12709 554 aaKnown RBP7.47□□□□□ -1.21
LSC1YOR142W PRP22P24384 1145 aaKnown RBP7.47□□□□□ -1.21
LSC1YOR142W IRE1P32361 1115 aa7.47□□□□□ -1.21
LSC1YOR142W FIS1P40515 155 aa7.47□□□□□ -1.21
LSC1YOR142W SGM1P47166 707 aa7.47□□□□□ -1.21
LSC1YOR142W PSP2P50109 593 aaKnown RBP7.47□□□□□ -1.21
LSC1YOR142W YGL081WP53156 320 aa7.47□□□□□ -1.21
LSC1YOR142W SDA1P53313 767 aaKnown RBP7.47□□□□□ -1.21
LSC1YOR142W PGA2P53903 129 aa7.47□□□□□ -1.21
LSC1YOR142W YNL115CP53925 644 aa7.47□□□□□ -1.21
LSC1YOR142W ADY4Q05955 493 aa7.47□□□□□ -1.21
LSC1YOR142W NBL1Q3E7Y6 73 aa7.47□□□□□ -1.21
LSC1YOR142W DED1P06634 604 aaKnown RBP7.46□□□□□ -1.22
LSC1YOR142W HEM1P09950 548 aaPredicted RBP7.46□□□□□ -1.22
LSC1YOR142W YEL076C-AP0CX16 216 aa7.46□□□□□ -1.22
LSC1YOR142W YLR464WP0CX17 216 aa7.46□□□□□ -1.22
LSC1YOR142W RGP1P16664 663 aa7.46□□□□□ -1.22
LSC1YOR142W CDC48P25694 835 aaKnown RBP7.46□□□□□ -1.22
LSC1YOR142W RME1P32338 300 aaKnown RBP7.46□□□□□ -1.22
LSC1YOR142W SMY2P32909 740 aaKnown RBP7.46□□□□□ -1.22
LSC1YOR142W YEL076CP39971 216 aa7.46□□□□□ -1.22
LSC1YOR142W MGA2P40578 1113 aa7.46□□□□□ -1.22
LSC1YOR142W YML020WQ03722 664 aa7.46□□□□□ -1.22
LSC1YOR142W HRQ1Q05549 1077 aa7.46□□□□□ -1.22
LSC1YOR142W YLH47Q06493 454 aa7.46□□□□□ -1.22
LSC1YOR142W SRD1P09007 221 aa7.45□□□□□ -1.22
LSC1YOR142W BIK1P11709 440 aa7.45□□□□□ -1.22
LSC1YOR142W UBC1P21734 215 aaKnown RBP7.45□□□□□ -1.22
LSC1YOR142W CAD1P24813 409 aaKnown RBP7.45□□□□□ -1.22
LSC1YOR142W PIH1P38768 344 aa7.45□□□□□ -1.22
LSC1YOR142W FOL2P51601 243 aaKnown RBP7.45□□□□□ -1.22
LSC1YOR142W MDR1P53258 950 aa7.45□□□□□ -1.22
LSC1YOR142W FUS2Q05670 677 aa7.45□□□□□ -1.22
LSC1YOR142W SMC6Q12749 1114 aa7.45□□□□□ -1.22
LSC1YOR142W HXK1P04806 485 aaKnown RBP7.44□□□□□ -1.22
LSC1YOR142W AFT1P22149 690 aa7.44□□□□□ -1.22
LSC1YOR142W EFT1P32324 842 aaKnown RBP7.44□□□□□ -1.22
LSC1YOR142W PET10P36139 283 aa7.44□□□□□ -1.22
LSC1YOR142W ROG3P43602 733 aa7.44□□□□□ -1.22
LSC1YOR142W PEX14P53112 341 aa7.44□□□□□ -1.22
LSC1YOR142W CBK1P53894 756 aa7.44□□□□□ -1.22
LSC1YOR142W CUS1Q02554 436 aaPredicted RBP7.44□□□□□ -1.22
LSC1YOR142W ROD1Q02805 837 aa7.44□□□□□ -1.22
LSC1YOR142W COQ9Q05779 260 aa7.44□□□□□ -1.22
LSC1YOR142W MMR1Q06324 491 aa7.44□□□□□ -1.22
LSC1YOR142W MCM3P24279 971 aaKnown RBP7.43□□□□□ -1.22
LSC1YOR142W MSS51P32335 436 aa7.43□□□□□ -1.22
LSC1YOR142W SIP3P38717 1229 aa7.43□□□□□ -1.22
LSC1YOR142W DAK2P43550 591 aa7.43□□□□□ -1.22
LSC1YOR142W AVT1P47082 602 aa7.43□□□□□ -1.22
LSC1YOR142W ACF4P47129 309 aa7.43□□□□□ -1.22
LSC1YOR142W UBA2P52488 636 aa7.43□□□□□ -1.22
LSC1YOR142W YVH1Q02256 364 aaKnown RBP7.43□□□□□ -1.22
LSC1YOR142W ISY1P21374 235 aaPredicted RBP7.42□□□□□ -1.22
LSC1YOR142W PGM2P37012 569 aaKnown RBP7.42□□□□□ -1.22
LSC1YOR142W ERC1P38767 581 aa7.42□□□□□ -1.22
LSC1YOR142W BRL1P38770 471 aa7.42□□□□□ -1.22
LSC1YOR142W EAF5P39995 279 aa7.42□□□□□ -1.22
LSC1YOR142W ALD5P40047 520 aaKnown RBP7.42□□□□□ -1.22
LSC1YOR142W THI6P41835 540 aa7.42□□□□□ -1.22
LSC1YOR142W RTC4P53850 401 aa7.42□□□□□ -1.22
LSC1YOR142W FAR11P53917 953 aa7.42□□□□□ -1.22
LSC1YOR142W ARK1P53974 638 aa7.42□□□□□ -1.22
LSC1YOR142W COG8Q04632 607 aa7.42□□□□□ -1.22
LSC1YOR142W SMC5Q08204 1093 aa7.42□□□□□ -1.22
LSC1YOR142W AHC1Q12433 566 aa7.42□□□□□ -1.22
LSC1YOR142W YLR422WQ06409 1932 aa7.41□□□□□ -1.22
LSC1YOR142W HIS4P00815 799 aaKnown RBP7.41□□□□□ -1.22
LSC1YOR142W FRS2P15625 503 aaKnown RBP7.41□□□□□ -1.22
LSC1YOR142W PFK1P16861 987 aaKnown RBP7.41□□□□□ -1.22
LSC1YOR142W CKA2P19454 339 aa7.41□□□□□ -1.22
LSC1YOR142W RPN3P40016 523 aaKnown RBP7.41□□□□□ -1.22
LSC1YOR142W CUE3P53137 624 aaKnown RBP7.41□□□□□ -1.22
LSC1YOR142W GUP1P53154 560 aa7.41□□□□□ -1.22
LSC1YOR142W MUK1Q02866 612 aa7.41□□□□□ -1.22
LSC1YOR142W EAR1Q03212 550 aa7.41□□□□□ -1.22
LSC1YOR142W YDL057WQ07379 328 aa7.41□□□□□ -1.22
LSC1YOR142W TCP1P12612 559 aaKnown RBP7.4□□□□□ -1.22
LSC1YOR142W DID4P36108 232 aa7.4□□□□□ -1.22
LSC1YOR142W DRE2P36152 348 aa7.4□□□□□ -1.22
LSC1YOR142W POA1P38218 177 aa7.4□□□□□ -1.22
LSC1YOR142W GUA1P38625 525 aaKnown RBP7.4□□□□□ -1.22
LSC1YOR142W NUP82P40368 713 aa7.4□□□□□ -1.22
LSC1YOR142W FYV10P40492 516 aa7.4□□□□□ -1.22
LSC1YOR142W TPO2P53283 614 aa7.4□□□□□ -1.22
LSC1YOR142W NCS2P53923 493 aaPredicted RBP7.4□□□□□ -1.22
LSC1YOR142W PEX19Q07418 342 aa7.4□□□□□ -1.22
LSC1YOR142W NOC3Q07896 663 aaPredicted RBP7.4□□□□□ -1.22
LSC1YOR142W YPR117WQ06116 2489 aa7.39□□□□□ -1.23
LSC1YOR142W RAM2P29703 316 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms