RNA–Protein interactions for RNA: YOL022C

TSR4, Cytoplasmic protein required for correct processing of 20S pre-rRNA, yeast

Gene TSR4, Length 1,227 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR4	YOL022C	GAL10	P04397	699 aa		4.83	□□□□□ -1.64
TSR4	YOL022C	YCR015C	P25616	317 aa		4.83	□□□□□ -1.64
TSR4	YOL022C	YKL151C	P36059	337 aa		4.83	□□□□□ -1.64
TSR4	YOL022C	MEF2	P39677	819 aa		4.83	□□□□□ -1.64
TSR4	YOL022C	MTC3	P53077	123 aa		4.83	□□□□□ -1.64
TSR4	YOL022C	GCN5	Q03330	439 aa		4.83	□□□□□ -1.64
TSR4	YOL022C	RSM24	Q03976	319 aa		4.83	□□□□□ -1.64
TSR4	YOL022C	SPO20	Q04359	397 aa		4.83	□□□□□ -1.64
TSR4	YOL022C	CDC6	P09119	513 aa		4.82	□□□□□ -1.64
TSR4	YOL022C	ABD1	P32783	436 aa	Predicted RBP	4.82	□□□□□ -1.64
TSR4	YOL022C	TOD6	P34219	525 aa		4.82	□□□□□ -1.64
TSR4	YOL022C	RRT14	P40470	206 aa		4.82	□□□□□ -1.64
TSR4	YOL022C	MAD1	P40957	749 aa		4.82	□□□□□ -1.64
TSR4	YOL022C	HFM1	P51979	1187 aa		4.82	□□□□□ -1.64
TSR4	YOL022C	JIP5	Q06214	492 aa	Predicted RBP	4.82	□□□□□ -1.64
TSR4	YOL022C	CMP2	P14747	604 aa		4.81	□□□□□ -1.64
TSR4	YOL022C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
TSR4	YOL022C	AGP1	P25376	633 aa		4.81	□□□□□ -1.64
TSR4	YOL022C	MSC2	Q03455	724 aa		4.81	□□□□□ -1.64
TSR4	YOL022C	ROT1	Q03691	256 aa		4.81	□□□□□ -1.64
TSR4	YOL022C	HRQ1	Q05549	1077 aa		4.81	□□□□□ -1.64
TSR4	YOL022C	KIN2	P13186	1147 aa	Known RBP	4.8	□□□□□ -1.64
TSR4	YOL022C	APL1	P27351	700 aa		4.8	□□□□□ -1.64
TSR4	YOL022C	SBA1	P28707	216 aa	Known RBP	4.8	□□□□□ -1.64
TSR4	YOL022C	YKL069W	P36088	180 aa		4.8	□□□□□ -1.64
TSR4	YOL022C	XYL2	Q07993	356 aa		4.8	□□□□□ -1.64
TSR4	YOL022C	THS1	P04801	734 aa	Known RBP	4.79	□□□□□ -1.64
TSR4	YOL022C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
TSR4	YOL022C	GIP4	P39732	760 aa		4.79	□□□□□ -1.64
TSR4	YOL022C	CLU1	Q03690	1277 aa	Known RBP	4.79	□□□□□ -1.64
TSR4	YOL022C	OPI10	Q08202	246 aa		4.79	□□□□□ -1.64
TSR4	YOL022C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
TSR4	YOL022C	FAL1	Q12099	399 aa	Known RBP	4.79	□□□□□ -1.64
TSR4	YOL022C	AIM44	Q99299	758 aa		4.79	□□□□□ -1.64
TSR4	YOL022C	CDC20	P26309	610 aa		4.78	□□□□□ -1.64
TSR4	YOL022C	DOM34	P33309	386 aa		4.78	□□□□□ -1.64
TSR4	YOL022C	MBP1	P39678	833 aa		4.78	□□□□□ -1.64
TSR4	YOL022C	SPT20	P50875	604 aa		4.78	□□□□□ -1.64
TSR4	YOL022C	CWC24	P53769	259 aa		4.78	□□□□□ -1.64
TSR4	YOL022C	YLL058W	Q12198	575 aa		4.78	□□□□□ -1.64
TSR4	YOL022C	VBA5	P36172	582 aa		4.77	□□□□□ -1.65
TSR4	YOL022C	GIC1	P38785	314 aa		4.77	□□□□□ -1.65
TSR4	YOL022C	SNF7	P39929	240 aa	Known RBP	4.77	□□□□□ -1.65
TSR4	YOL022C	NPP2	P39997	493 aa		4.77	□□□□□ -1.65
TSR4	YOL022C	VPS62	P53285	467 aa		4.77	□□□□□ -1.65
TSR4	YOL022C	ALD6	P54115	500 aa	Known RBP	4.77	□□□□□ -1.65
TSR4	YOL022C	MDM38	Q08179	573 aa		4.77	□□□□□ -1.65
TSR4	YOL022C	PRI2	P20457	528 aa		4.76	□□□□□ -1.65
TSR4	YOL022C	YKL222C	P35995	705 aa		4.76	□□□□□ -1.65
TSR4	YOL022C	YAP1801	P38856	637 aa		4.76	□□□□□ -1.65
TSR4	YOL022C	KRI1	P42846	591 aa	Known RBP	4.76	□□□□□ -1.65
TSR4	YOL022C	SHE9	Q04172	456 aa		4.76	□□□□□ -1.65
TSR4	YOL022C	ACK1	Q07622	623 aa	Predicted RBP	4.76	□□□□□ -1.65
TSR4	YOL022C	YOR352W	Q08816	343 aa		4.76	□□□□□ -1.65
TSR4	YOL022C	GPB1	Q08886	897 aa		4.76	□□□□□ -1.65
TSR4	YOL022C	YLR358C	O13565	187 aa		4.75	□□□□□ -1.65
TSR4	YOL022C	CTS1	P29029	562 aa		4.75	□□□□□ -1.65
TSR4	YOL022C	CDC12	P32468	407 aa	Known RBP	4.75	□□□□□ -1.65
TSR4	YOL022C	VAC8	P39968	578 aa		4.75	□□□□□ -1.65
TSR4	YOL022C	MND2	P40577	368 aa		4.75	□□□□□ -1.65
TSR4	YOL022C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.75	□□□□□ -1.65	not detected
TSR4	YOL022C	HMI1	Q12039	706 aa		4.75	□□□□□ -1.65
TSR4	YOL022C	FUN30	P31380	1131 aa		4.74	□□□□□ -1.65
TSR4	YOL022C	SRT1	Q03175	343 aa		4.74	□□□□□ -1.65
TSR4	YOL022C	RXT3	Q07458	294 aa		4.74	□□□□□ -1.65
TSR4	YOL022C	ADY3	Q07732	790 aa		4.74	□□□□□ -1.65
TSR4	YOL022C	TAT2	P38967	592 aa		4.73	□□□□□ -1.65
TSR4	YOL022C	SPF1	P39986	1215 aa	Known RBP	4.73	□□□□□ -1.65
TSR4	YOL022C	PBP1	P53297	722 aa	Known RBP	4.73	□□□□□ -1.65
TSR4	YOL022C	YAP6	Q03935	383 aa		4.73	□□□□□ -1.65
TSR4	YOL022C	TPO1	Q07824	586 aa		4.73	□□□□□ -1.65
TSR4	YOL022C	EMC1	P25574	760 aa		4.72	□□□□□ -1.65
TSR4	YOL022C	LST4	P34239	828 aa		4.72	□□□□□ -1.65
TSR4	YOL022C	GCV2	P49095	1034 aa		4.72	□□□□□ -1.65
TSR4	YOL022C	GTF1	P53260	183 aa	Predicted RBP	4.72	□□□□□ -1.65
TSR4	YOL022C	CDA1	Q06702	301 aa		4.72	□□□□□ -1.65
TSR4	YOL022C	OSW2	Q12202	724 aa		4.72	□□□□□ -1.65
TSR4	YOL022C	STE5	P32917	917 aa		4.71	□□□□□ -1.66
TSR4	YOL022C	AFR1	P33304	620 aa		4.71	□□□□□ -1.66
TSR4	YOL022C	MRP8	P35719	219 aa		4.71	□□□□□ -1.66
TSR4	YOL022C	SHM2	P37291	469 aa	Known RBP	4.71	□□□□□ -1.66
TSR4	YOL022C	ECM21	P38167	1117 aa	Known RBP	4.71	□□□□□ -1.66
TSR4	YOL022C	SAH1	P39954	449 aa	Known RBP	4.71	□□□□□ -1.66
TSR4	YOL022C	ZRG8	P40021	1076 aa		4.71	□□□□□ -1.66
TSR4	YOL022C	YLR224W	Q05947	369 aa		4.71	□□□□□ -1.66
TSR4	YOL022C	DUS3	Q06053	668 aa	Known RBP	4.71	□□□□□ -1.66
TSR4	YOL022C	STE11	P23561	717 aa		4.7	□□□□□ -1.66
TSR4	YOL022C	OCA5	P38738	679 aa		4.7	□□□□□ -1.66
TSR4	YOL022C	MET12	P46151	657 aa		4.7	□□□□□ -1.66
TSR4	YOL022C	GYP7	P48365	746 aa		4.7	□□□□□ -1.66
TSR4	YOL022C	SFB2	P53953	876 aa		4.7	□□□□□ -1.66
TSR4	YOL022C	TMA10	Q06177	86 aa		4.7	□□□□□ -1.66
TSR4	YOL022C	SSF2	Q12153	453 aa	Predicted RBP	4.7	□□□□□ -1.66
TSR4	YOL022C	NPP1	P25353	742 aa		4.69	□□□□□ -1.66
TSR4	YOL022C	SRP101	P32916	621 aa		4.69	□□□□□ -1.66
TSR4	YOL022C	PBY1	P38254	753 aa		4.69	□□□□□ -1.66
TSR4	YOL022C	YBR238C	P38330	731 aa	Known RBP	4.69	□□□□□ -1.66
TSR4	YOL022C	TSL1	P38427	1098 aa	Known RBP	4.69	□□□□□ -1.66
TSR4	YOL022C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
TSR4	YOL022C	PFD1	P46988	109 aa		4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms