RNA–Protein interactions for RNA: YNL222W

SSU72, Transcript of Phosphatase and transcription/RNA-processing factor, yeastyeast

Gene SSU72, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSU72YNL222W SGD1Q06132 899 aa6.45□□□□□ -1.38
SSU72YNL222W ATG13Q06628 738 aa6.45□□□□□ -1.38
SSU72YNL222W YPL277CQ08989 487 aa6.45□□□□□ -1.38
SSU72YNL222W GAL10P04397 699 aa6.44□□□□□ -1.38
SSU72YNL222W RPS13P05756 151 aaKnown RBP6.44□□□□□ -1.38
SSU72YNL222W ACE2P21192 770 aa6.44□□□□□ -1.38
SSU72YNL222W SRM1P21827 482 aa6.44□□□□□ -1.38
SSU72YNL222W SBA1P28707 216 aaKnown RBP6.44□□□□□ -1.38
SSU72YNL222W THI80P35202 319 aa6.44□□□□□ -1.38
SSU72YNL222W KIN2P13186 1147 aaKnown RBP6.43□□□□□ -1.38
SSU72YNL222W KRI1P42846 591 aaKnown RBP6.43□□□□□ -1.38
SSU72YNL222W RIM8P53179 542 aa6.43□□□□□ -1.38
SSU72YNL222W PLB2Q03674 706 aa6.43□□□□□ -1.38
SSU72YNL222W THS1P04801 734 aaKnown RBP6.42□□□□□ -1.38
SSU72YNL222W TOD6P34219 525 aa6.42□□□□□ -1.38
SSU72YNL222W VBA5P36172 582 aa6.42□□□□□ -1.38
SSU72YNL222W LAM1P38851 1228 aa6.42□□□□□ -1.38
SSU72YNL222W SNF7P39929 240 aaKnown RBP6.42□□□□□ -1.38
SSU72YNL222W HFM1P51979 1187 aa6.42□□□□□ -1.38
SSU72YNL222W VTS1Q08831 523 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
SSU72YNL222W SOD2P00447 233 aa6.41□□□□□ -1.38
SSU72YNL222W RRT14P40470 206 aa6.41□□□□□ -1.38
SSU72YNL222W YDR132CQ03900 495 aa6.41□□□□□ -1.38
SSU72YNL222W HRQ1Q05549 1077 aa6.41□□□□□ -1.38
SSU72YNL222W YKL151CP36059 337 aa6.4□□□□□ -1.38
SSU72YNL222W MEF2P39677 819 aa6.4□□□□□ -1.38
SSU72YNL222W MTC3P53077 123 aa6.4□□□□□ -1.38
SSU72YNL222W YKL222CP35995 705 aa6.39□□□□□ -1.39
SSU72YNL222W SPT20P50875 604 aa6.39□□□□□ -1.39
SSU72YNL222W GCN5Q03330 439 aa6.39□□□□□ -1.39
SSU72YNL222W SHE9Q04172 456 aa6.39□□□□□ -1.39
SSU72YNL222W SIZ1Q04195 904 aa6.39□□□□□ -1.39
SSU72YNL222W XYL2Q07993 356 aa6.39□□□□□ -1.39
SSU72YNL222W ESC8Q08119 714 aa6.39□□□□□ -1.39
SSU72YNL222W SAH1P39954 449 aaKnown RBP6.38□□□□□ -1.39
SSU72YNL222W SPF1P39986 1215 aaKnown RBP6.38□□□□□ -1.39
SSU72YNL222W NOP7P53261 605 aaKnown RBP6.38□□□□□ -1.39
SSU72YNL222W MSC2Q03455 724 aa6.38□□□□□ -1.39
SSU72YNL222W TDA5Q06417 326 aaKnown RBP6.38□□□□□ -1.39
SSU72YNL222W YCR015CP25616 317 aa6.37□□□□□ -1.39
SSU72YNL222W GTF1P53260 183 aaPredicted RBP6.37□□□□□ -1.39
SSU72YNL222W DUS3Q06053 668 aaKnown RBP6.37□□□□□ -1.39
SSU72YNL222W MDM38Q08179 573 aa6.37□□□□□ -1.39
SSU72YNL222W FLR1P38124 548 aa6.36□□□□□ -1.39
SSU72YNL222W DUS4Q06063 367 aa6.36□□□□□ -1.39
SSU72YNL222W SSF2Q12153 453 aaPredicted RBP6.36□□□□□ -1.39
SSU72YNL222W MRP8P35719 219 aa6.35□□□□□ -1.39
SSU72YNL222W GIC1P38785 314 aa6.35□□□□□ -1.39
SSU72YNL222W TAF1P46677 1066 aa6.35□□□□□ -1.39
SSU72YNL222W OSW2Q12202 724 aa6.35□□□□□ -1.39
SSU72YNL222W CDC12P32468 407 aaKnown RBP6.34□□□□□ -1.39
SSU72YNL222W STE5P32917 917 aa6.34□□□□□ -1.39
SSU72YNL222W NPP2P39997 493 aa6.34□□□□□ -1.39
SSU72YNL222W GCV2P49095 1034 aa6.34□□□□□ -1.39
SSU72YNL222W YDR306CQ06640 478 aa6.34□□□□□ -1.39
SSU72YNL222W WRS1Q12109 432 aaKnown RBP6.34□□□□□ -1.39
SSU72YNL222W YLL058WQ12198 575 aa6.34□□□□□ -1.39
SSU72YNL222W YAP1801P38856 637 aa6.33□□□□□ -1.4
SSU72YNL222W GUS1P46655 708 aaKnown RBP RIP-Chip data6.33□□□□□ -1.4not detected
SSU72YNL222W SRP1Q02821 542 aaKnown RBP6.33□□□□□ -1.4
SSU72YNL222W SRT1Q03175 343 aa6.33□□□□□ -1.4
SSU72YNL222W GPB1Q08886 897 aa6.33□□□□□ -1.4
SSU72YNL222W CDC6P09119 513 aa6.32□□□□□ -1.4
SSU72YNL222W ENA1P13587 1091 aa6.32□□□□□ -1.4
SSU72YNL222W PRE10P21242 288 aaKnown RBP RIP-Chip data6.32□□□□□ -1.4not detected
SSU72YNL222W PBY1P38254 753 aa6.32□□□□□ -1.4
SSU72YNL222W YBR184WP38299 523 aa6.32□□□□□ -1.4
SSU72YNL222W GIP4P39732 760 aa6.32□□□□□ -1.4
SSU72YNL222W ZRG8P40021 1076 aa6.32□□□□□ -1.4
SSU72YNL222W PBP1P53297 722 aaKnown RBP6.32□□□□□ -1.4
SSU72YNL222W ENA2Q01896 1091 aa6.32□□□□□ -1.4
SSU72YNL222W RXT3Q07458 294 aa6.32□□□□□ -1.4
SSU72YNL222W ENA5Q12691 1091 aa6.32□□□□□ -1.4
SSU72YNL222W GRX1P25373 110 aaKnown RBP6.31□□□□□ -1.4
SSU72YNL222W CDC20P26309 610 aa6.31□□□□□ -1.4
SSU72YNL222W FUN30P31380 1131 aa6.31□□□□□ -1.4
SSU72YNL222W SRP101P32916 621 aa6.31□□□□□ -1.4
SSU72YNL222W IRR1P40541 1150 aa6.31□□□□□ -1.4
SSU72YNL222W MND2P40577 368 aa6.31□□□□□ -1.4
SSU72YNL222W ACK1Q07622 623 aaPredicted RBP6.31□□□□□ -1.4
SSU72YNL222W YLR358CO13565 187 aa6.3□□□□□ -1.4
SSU72YNL222W EMC1P25574 760 aa6.3□□□□□ -1.4
SSU72YNL222W PPH3P32345 308 aa6.3□□□□□ -1.4
SSU72YNL222W SFB2P53953 876 aa6.3□□□□□ -1.4
SSU72YNL222W YAP6Q03935 383 aa6.3□□□□□ -1.4
SSU72YNL222W ECM21P38167 1117 aaKnown RBP6.29□□□□□ -1.4
SSU72YNL222W PFD1P46988 109 aa6.29□□□□□ -1.4
SSU72YNL222W VPS62P53285 467 aa6.29□□□□□ -1.4
SSU72YNL222W CLU1Q03690 1277 aaKnown RBP6.29□□□□□ -1.4
SSU72YNL222W HMI1Q12039 706 aa6.29□□□□□ -1.4
SSU72YNL222W AAR2P32357 355 aaPredicted RBP6.28□□□□□ -1.4
SSU72YNL222W DOM34P33309 386 aa6.28□□□□□ -1.4
SSU72YNL222W NAN1Q02931 896 aaKnown RBP6.28□□□□□ -1.4
SSU72YNL222W TPO1Q07824 586 aa6.28□□□□□ -1.4
SSU72YNL222W NPP1P25353 742 aa6.27□□□□□ -1.41
SSU72YNL222W POA1P38218 177 aa6.27□□□□□ -1.41
SSU72YNL222W TAT2P38967 592 aa6.27□□□□□ -1.41
SSU72YNL222W YGR012WP53206 393 aa6.27□□□□□ -1.41
SSU72YNL222W CDA1Q06702 301 aa6.27□□□□□ -1.41
SSU72YNL222W PRP9P19736 530 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms