RNA–Protein interactions for RNA: YNL119W

NCS2, Transcript of Protein required for uridine thiolation of Lys(UUU) and Glu(UUC) tRNAs, yeast

Gene NCS2, Length 1,482 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCS2	YNL119W	MDS3	P53094	1487 aa		4.24	□□□□□ -1.73
NCS2	YNL119W	RFC5	P38251	354 aa		4.24	□□□□□ -1.73
NCS2	YNL119W	RRT14	P40470	206 aa		4.24	□□□□□ -1.73
NCS2	YNL119W	OSH2	Q12451	1283 aa		4.24	□□□□□ -1.73
NCS2	YNL119W	KIN2	P13186	1147 aa	Known RBP	4.23	□□□□□ -1.73
NCS2	YNL119W	DBP2	P24783	546 aa	Known RBP	4.23	□□□□□ -1.73
NCS2	YNL119W	SLA2	P33338	968 aa		4.23	□□□□□ -1.73
NCS2	YNL119W	YBR184W	P38299	523 aa		4.23	□□□□□ -1.73
NCS2	YNL119W	ECL1	P48235	211 aa		4.23	□□□□□ -1.73
NCS2	YNL119W	ATG13	Q06628	738 aa		4.23	□□□□□ -1.73
NCS2	YNL119W	SVS1	Q12254	260 aa		4.23	□□□□□ -1.73
NCS2	YNL119W	LPX1	Q12405	387 aa	Known RBP	4.23	□□□□□ -1.73
NCS2	YNL119W	POL12	P38121	705 aa	Predicted RBP	4.22	□□□□□ -1.73
NCS2	YNL119W	MBP1	P39678	833 aa		4.22	□□□□□ -1.73
NCS2	YNL119W	ERP6	P53198	216 aa		4.22	□□□□□ -1.73
NCS2	YNL119W	RSM24	Q03976	319 aa		4.22	□□□□□ -1.73
NCS2	YNL119W	YOR352W	Q08816	343 aa		4.22	□□□□□ -1.73
NCS2	YNL119W	YLL058W	Q12198	575 aa		4.22	□□□□□ -1.73
NCS2	YNL119W	DFG16	Q99234	619 aa		4.22	□□□□□ -1.73
NCS2	YNL119W	BUD4	P47136	1447 aa		4.22	□□□□□ -1.73
NCS2	YNL119W	BI4	P03879	638 aa		4.21	□□□□□ -1.74
NCS2	YNL119W	RAD4	P14736	754 aa		4.21	□□□□□ -1.74
NCS2	YNL119W	PPH3	P32345	308 aa		4.21	□□□□□ -1.74
NCS2	YNL119W	CDC11	P32458	415 aa		4.21	□□□□□ -1.74
NCS2	YNL119W	LRG1	P35688	1017 aa		4.21	□□□□□ -1.74
NCS2	YNL119W	YFL054C	P43549	646 aa		4.21	□□□□□ -1.74
NCS2	YNL119W	TIM54	P47045	478 aa		4.21	□□□□□ -1.74
NCS2	YNL119W	DUS3	Q06053	668 aa	Known RBP	4.21	□□□□□ -1.74
NCS2	YNL119W	EAF1	Q06337	982 aa		4.21	□□□□□ -1.74
NCS2	YNL119W	YOL098C	Q12496	1037 aa		4.21	□□□□□ -1.74
NCS2	YNL119W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
NCS2	YNL119W	ACE2	P21192	770 aa		4.2	□□□□□ -1.74
NCS2	YNL119W	AAR2	P32357	355 aa	Predicted RBP	4.2	□□□□□ -1.74
NCS2	YNL119W	SAH1	P39954	449 aa	Known RBP	4.2	□□□□□ -1.74
NCS2	YNL119W	SNO2	P53823	222 aa		4.2	□□□□□ -1.74
NCS2	YNL119W	YDR306C	Q06640	478 aa		4.2	□□□□□ -1.74
NCS2	YNL119W	YOR131C	Q12486	218 aa		4.2	□□□□□ -1.74
NCS2	YNL119W	ECM5	Q03214	1411 aa		4.2	□□□□□ -1.74
NCS2	YNL119W	ADE8	P04161	214 aa		4.19	□□□□□ -1.74
NCS2	YNL119W	HSP60	P19882	572 aa	Known RBP	4.19	□□□□□ -1.74
NCS2	YNL119W	SRP40	P32583	406 aa	Predicted RBP	4.19	□□□□□ -1.74
NCS2	YNL119W	STE5	P32917	917 aa		4.19	□□□□□ -1.74
NCS2	YNL119W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
NCS2	YNL119W	UTP8	P53276	713 aa	Known RBP	4.19	□□□□□ -1.74
NCS2	YNL119W	FMP25	Q08023	583 aa		4.19	□□□□□ -1.74
NCS2	YNL119W	CDC53	Q12018	815 aa	Known RBP	4.19	□□□□□ -1.74
NCS2	YNL119W	PEP1	P32319	1579 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	ARE1	P25628	610 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	APL1	P27351	700 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	RPL8B	P29453	256 aa	Known RBP	4.18	□□□□□ -1.74
NCS2	YNL119W	OCA5	P38738	679 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	ETP1	P38748	585 aa	Known RBP	4.18	□□□□□ -1.74
NCS2	YNL119W	TAT2	P38967	592 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	UBP5	P39944	805 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	ALR2	P43553	858 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	PRP43	P53131	767 aa	Known RBP	4.18	□□□□□ -1.74
NCS2	YNL119W	YGR125W	P53273	1036 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
NCS2	YNL119W	OSW2	Q12202	724 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	CDC12	P32468	407 aa	Known RBP	4.18	□□□□□ -1.74
NCS2	YNL119W	GGA2	P38817	585 aa	Known RBP	4.18	□□□□□ -1.74
NCS2	YNL119W	SIT1	P39980	628 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	HUL4	P40985	892 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	PFD1	P46988	109 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	NSE3	Q05541	303 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	BDF2	Q07442	638 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	MDM38	Q08179	573 aa		4.18	□□□□□ -1.74
NCS2	YNL119W	FUN30	P31380	1131 aa		4.17	□□□□□ -1.74
NCS2	YNL119W	HUL5	P53119	910 aa		4.17	□□□□□ -1.74
NCS2	YNL119W	MRPL22	P53881	309 aa		4.17	□□□□□ -1.74
NCS2	YNL119W	HRQ1	Q05549	1077 aa		4.17	□□□□□ -1.74
NCS2	YNL119W	FLC1	Q08967	793 aa		4.17	□□□□□ -1.74
NCS2	YNL119W	CYC1	P00044	109 aa	Predicted RBP	4.16	□□□□□ -1.74
NCS2	YNL119W	RPC82	P32349	654 aa		4.16	□□□□□ -1.74
NCS2	YNL119W	SEG2	P34250	1132 aa		4.16	□□□□□ -1.74
NCS2	YNL119W	YKR078W	P36158	585 aa	Known RBP	4.16	□□□□□ -1.74
NCS2	YNL119W	CCC2	P38995	1004 aa		4.16	□□□□□ -1.74
NCS2	YNL119W	PBP1	P53297	722 aa	Known RBP	4.16	□□□□□ -1.74
NCS2	YNL119W	SRT1	Q03175	343 aa		4.16	□□□□□ -1.74
NCS2	YNL119W	SIZ1	Q04195	904 aa		4.16	□□□□□ -1.74
NCS2	YNL119W	YDL124W	Q07551	312 aa	Known RBP	4.16	□□□□□ -1.74
NCS2	YNL119W	YTA7	P40340	1379 aa		4.15	□□□□□ -1.74
NCS2	YNL119W	HIR3	P47171	1648 aa		4.15	□□□□□ -1.74
NCS2	YNL119W	CIT1	P00890	479 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	RPP2A	P05319	106 aa	Known RBP	4.15	□□□□□ -1.75
NCS2	YNL119W	GAL11	P19659	1081 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	RNQ1	P25367	405 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	YKL091C	P33324	310 aa	Known RBP	4.15	□□□□□ -1.75
NCS2	YNL119W	YRO2	P38079	344 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	NIT1	P40447	199 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	OSW7	P43611	510 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	CCM1	P48237	864 aa	Predicted RBP	4.15	□□□□□ -1.75
NCS2	YNL119W	HFM1	P51979	1187 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	MTC3	P53077	123 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	GIS1	Q03833	894 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	LCD1	Q04377	747 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	SGD1	Q06132	899 aa		4.15	□□□□□ -1.75
NCS2	YNL119W	FPR4	Q06205	392 aa	Predicted RBP	4.15	□□□□□ -1.75
NCS2	YNL119W	CMP2	P14747	604 aa		4.14	□□□□□ -1.75
NCS2	YNL119W	GAS1	P22146	559 aa	Known RBP	4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 159.6 ms