RNA–Protein interactions for RNA: YMR045C

YMR045C, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YMR045C, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR045CYMR045C MTD1Q02046 320 aaKnown RBP2.06□□□□□ -2.08
YMR045CYMR045C YPL109CQ02981 657 aa2.06□□□□□ -2.08
YMR045CYMR045C PDS5Q04264 1277 aa2.06□□□□□ -2.08
YMR045CYMR045C DNL4Q08387 944 aaPredicted RBP2.06□□□□□ -2.08
YMR045CYMR045C NMD4Q12129 218 aa2.06□□□□□ -2.08
YMR045CYMR045C BBP1Q12365 385 aa2.06□□□□□ -2.08
YMR045CYMR045C AFG2P32794 780 aa2.06□□□□□ -2.08
YMR045CYMR045C KAP104P38217 918 aaKnown RBP2.06□□□□□ -2.08
YMR045CYMR045C CST26P38226 397 aa2.06□□□□□ -2.08
YMR045CYMR045C YHR078WP38799 552 aa2.06□□□□□ -2.08
YMR045CYMR045C VPS27P40343 622 aaKnown RBP2.06□□□□□ -2.08
YMR045CYMR045C BAP3P41815 604 aa2.06□□□□□ -2.08
YMR045CYMR045C APT1P49435 187 aaKnown RBP2.06□□□□□ -2.08
YMR045CYMR045C NSA1P53136 463 aaPredicted RBP2.06□□□□□ -2.08
YMR045CYMR045C PRO2P54885 456 aaKnown RBP2.06□□□□□ -2.08
YMR045CYMR045C SKO1Q02100 647 aa2.06□□□□□ -2.08
YMR045CYMR045C KRE28Q04431 385 aa2.06□□□□□ -2.08
YMR045CYMR045C YLR455WQ06188 304 aa2.06□□□□□ -2.08
YMR045CYMR045C CUR1Q06469 252 aa2.06□□□□□ -2.08
YMR045CYMR045C CSM4Q08955 156 aa2.06□□□□□ -2.08
YMR045CYMR045C FMP40Q08968 688 aaPredicted RBP2.06□□□□□ -2.08
YMR045CYMR045C YMR085WP0CF18 432 aa2.06□□□□□ -2.08
YMR045CYMR045C SPO16P17122 198 aa2.06□□□□□ -2.08
YMR045CYMR045C RPB5P20434 215 aa2.06□□□□□ -2.08
YMR045CYMR045C ALP1P38971 573 aa2.06□□□□□ -2.08
YMR045CYMR045C ILV3P39522 585 aaKnown RBP2.06□□□□□ -2.08
YMR045CYMR045C PRM2P40534 656 aa2.06□□□□□ -2.08
YMR045CYMR045C RPS0BP46654 252 aaKnown RBP2.06□□□□□ -2.08
YMR045CYMR045C VPS4P52917 437 aa2.06□□□□□ -2.08
YMR045CYMR045C MCM6P53091 1017 aaKnown RBP2.06□□□□□ -2.08
YMR045CYMR045C LIF1P53150 421 aa2.06□□□□□ -2.08
YMR045CYMR045C CUS1Q02554 436 aaPredicted RBP2.06□□□□□ -2.08
YMR045CYMR045C HRD3Q05787 833 aa2.06□□□□□ -2.08
YMR045CYMR045C HSP42Q12329 375 aa2.06□□□□□ -2.08
YMR045CYMR045C PAB1P04147 577 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
YMR045CYMR045C LTE1P07866 1435 aa2.05□□□□□ -2.08
YMR045CYMR045C HOP1P20050 605 aa2.05□□□□□ -2.08
YMR045CYMR045C SIR1P21691 654 aa2.05□□□□□ -2.08
YMR045CYMR045C RNP1P32385 249 aa2.05□□□□□ -2.08
YMR045CYMR045C DCG1P32460 244 aa2.05□□□□□ -2.08
YMR045CYMR045C KAR9P32526 644 aa2.05□□□□□ -2.08
YMR045CYMR045C RAD5P32849 1169 aaPredicted RBP2.05□□□□□ -2.08
YMR045CYMR045C SER1P33330 395 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C TSL1P38427 1098 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C YHR122WP38829 231 aa2.05□□□□□ -2.08
YMR045CYMR045C RPN10P38886 268 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C NOP16P40007 231 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C TFG1P41895 735 aaPredicted RBP2.05□□□□□ -2.08
YMR045CYMR045C NOP19P53317 196 aaPredicted RBP2.05□□□□□ -2.08
YMR045CYMR045C IST1P53843 298 aaPredicted RBP2.05□□□□□ -2.08
YMR045CYMR045C ZDS2P54786 942 aa2.05□□□□□ -2.08
YMR045CYMR045C TRM44Q02648 567 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C RPM2Q02773 1202 aa2.05□□□□□ -2.08
YMR045CYMR045C ATG21Q02887 496 aa2.05□□□□□ -2.08
YMR045CYMR045C FDC1Q03034 503 aa2.05□□□□□ -2.08
YMR045CYMR045C PEX29Q03370 554 aa2.05□□□□□ -2.08
YMR045CYMR045C WAR1Q03631 944 aa2.05□□□□□ -2.08
YMR045CYMR045C RQC1Q05468 723 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C ALE1Q08548 619 aa2.05□□□□□ -2.08
YMR045CYMR045C YPL272CQ08984 517 aa2.05□□□□□ -2.08
YMR045CYMR045C NBP2Q12163 236 aa2.05□□□□□ -2.08
YMR045CYMR045C TIF6Q12522 245 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C YBL113CQ7M4S9 792 aa2.05□□□□□ -2.08
YMR045CYMR045C RAD1P06777 1100 aa2.05□□□□□ -2.08
YMR045CYMR045C ARG8P18544 423 aa2.05□□□□□ -2.08
YMR045CYMR045C DBP5P20449 482 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C ERG6P25087 383 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C SCJ1P25303 377 aa2.05□□□□□ -2.08
YMR045CYMR045C BMH1P29311 267 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C CDC11P32458 415 aa2.05□□□□□ -2.08
YMR045CYMR045C PXL1P36166 706 aa2.05□□□□□ -2.08
YMR045CYMR045C PBY1P38254 753 aa2.05□□□□□ -2.08
YMR045CYMR045C RTT105P40063 208 aa2.05□□□□□ -2.08
YMR045CYMR045C MGS1P40151 587 aa2.05□□□□□ -2.08
YMR045CYMR045C RGI2P40188 164 aa2.05□□□□□ -2.08
YMR045CYMR045C PHB1P40961 287 aa2.05□□□□□ -2.08
YMR045CYMR045C FIG4P42837 879 aa2.05□□□□□ -2.08
YMR045CYMR045C RMD8P43620 662 aa2.05□□□□□ -2.08
YMR045CYMR045C JSN1P47135 1091 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
YMR045CYMR045C SSN8P47821 323 aa2.05□□□□□ -2.08
YMR045CYMR045C ECL1P48235 211 aa2.05□□□□□ -2.08
YMR045CYMR045C TEL2P53038 688 aa2.05□□□□□ -2.08
YMR045CYMR045C OGG1P53397 376 aaPredicted RBP2.05□□□□□ -2.08
YMR045CYMR045C MRPL50P53724 139 aa2.05□□□□□ -2.08
YMR045CYMR045C CSL4P53859 292 aaPredicted RBP2.05□□□□□ -2.08
YMR045CYMR045C PRM4Q12498 284 aa2.05□□□□□ -2.08
YMR045CYMR045C GPH1P06738 902 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C DFR1P07807 211 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
YMR045CYMR045C RPB4P20433 221 aaPredicted RBP2.05□□□□□ -2.08
YMR045CYMR045C DBP3P20447 523 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C GUT2P32191 649 aa2.05□□□□□ -2.08
YMR045CYMR045C PRP21P32524 280 aaPredicted RBP2.05□□□□□ -2.08
YMR045CYMR045C STE5P32917 917 aa2.05□□□□□ -2.08
YMR045CYMR045C BYE1P36106 594 aa2.05□□□□□ -2.08
YMR045CYMR045C KEL1P38853 1164 aaKnown RBP2.05□□□□□ -2.08
YMR045CYMR045C ACO2P39533 789 aa2.05□□□□□ -2.08
YMR045CYMR045C SRL4Q03085 281 aa2.05□□□□□ -2.08
YMR045CYMR045C YMR196WQ04336 1088 aa2.05□□□□□ -2.08
YMR045CYMR045C YLR271WQ06152 274 aa2.05□□□□□ -2.08
YMR045CYMR045C SFG1Q12507 346 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms