RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeastyeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS33YLR396C ARE1P25628 610 aa4.54□□□□□ -1.68
VPS33YLR396C UBX5Q06682 500 aa4.54□□□□□ -1.68
VPS33YLR396C PRO1P32264 428 aa4.53□□□□□ -1.68
VPS33YLR396C YKL151CP36059 337 aa4.53□□□□□ -1.68
VPS33YLR396C PTC7P38797 343 aa4.53□□□□□ -1.68
VPS33YLR396C SSY1Q03770 852 aa4.53□□□□□ -1.68
VPS33YLR396C YDR306CQ06640 478 aa4.53□□□□□ -1.68
VPS33YLR396C NBA1Q08229 501 aaKnown RBP4.53□□□□□ -1.68
VPS33YLR396C MED7Q08278 222 aa4.53□□□□□ -1.68
VPS33YLR396C GTS1P40956 396 aa4.53□□□□□ -1.68
VPS33YLR396C TAF8Q03750 510 aa4.53□□□□□ -1.68
VPS33YLR396C HRQ1Q05549 1077 aa4.53□□□□□ -1.68
VPS33YLR396C DUS3Q06053 668 aaKnown RBP4.53□□□□□ -1.68
VPS33YLR396C AIM44Q99299 758 aa4.53□□□□□ -1.68
VPS33YLR396C BI4P03879 638 aa4.52□□□□□ -1.69
VPS33YLR396C CAN1P04817 590 aa4.52□□□□□ -1.69
VPS33YLR396C CDC12P32468 407 aaKnown RBP4.52□□□□□ -1.69
VPS33YLR396C CHZ1P40019 153 aaPredicted RBP4.52□□□□□ -1.69
VPS33YLR396C THS1P04801 734 aaKnown RBP4.52□□□□□ -1.69
VPS33YLR396C ADP1P25371 1049 aa4.52□□□□□ -1.69
VPS33YLR396C TOS1P38288 455 aa4.52□□□□□ -1.69
VPS33YLR396C GGA2P38817 585 aaKnown RBP4.52□□□□□ -1.69
VPS33YLR396C SIT1P39980 628 aa4.52□□□□□ -1.69
VPS33YLR396C OSW7P43611 510 aa4.52□□□□□ -1.69
VPS33YLR396C MTC3P53077 123 aa4.52□□□□□ -1.69
VPS33YLR396C SDH1Q00711 640 aa4.52□□□□□ -1.69
VPS33YLR396C UBP3Q01477 912 aaKnown RBP RIP-Chip data4.52□□□□□ -1.69not detected
VPS33YLR396C ATG13Q06628 738 aa4.52□□□□□ -1.69
VPS33YLR396C YLL058WQ12198 575 aa4.52□□□□□ -1.69
VPS33YLR396C GAL11P19659 1081 aa4.51□□□□□ -1.69
VPS33YLR396C AIM26P32858 118 aa4.51□□□□□ -1.69
VPS33YLR396C CCC2P38995 1004 aa4.51□□□□□ -1.69
VPS33YLR396C HUL4P40985 892 aa4.51□□□□□ -1.69
VPS33YLR396C SRP1Q02821 542 aaKnown RBP4.51□□□□□ -1.69
VPS33YLR396C RSB1Q08417 382 aa4.51□□□□□ -1.69
VPS33YLR396C LPX1Q12405 387 aaKnown RBP4.51□□□□□ -1.69
VPS33YLR396C ACE2P21192 770 aa4.5□□□□□ -1.69
VPS33YLR396C AAR2P32357 355 aaPredicted RBP4.5□□□□□ -1.69
VPS33YLR396C TIM23P32897 222 aa4.5□□□□□ -1.69
VPS33YLR396C AFR1P33304 620 aa4.5□□□□□ -1.69
VPS33YLR396C RRT14P40470 206 aa4.5□□□□□ -1.69
VPS33YLR396C TPO2P53283 614 aa4.5□□□□□ -1.69
VPS33YLR396C ORC3P54790 616 aa4.5□□□□□ -1.69
VPS33YLR396C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.5□□□□□ -1.69not detected
VPS33YLR396C HBN1Q96VH4 193 aa4.5□□□□□ -1.69
VPS33YLR396C BET3P36149 193 aa4.5□□□□□ -1.69
VPS33YLR396C SAH1P39954 449 aaKnown RBP4.5□□□□□ -1.69
VPS33YLR396C NUP82P40368 713 aa4.5□□□□□ -1.69
VPS33YLR396C RTA1P53047 317 aa4.5□□□□□ -1.69
VPS33YLR396C RNH70P53331 553 aa4.5□□□□□ -1.69
VPS33YLR396C BUL2Q03758 920 aaKnown RBP4.5□□□□□ -1.69
VPS33YLR396C MDM38Q08179 573 aa4.5□□□□□ -1.69
VPS33YLR396C SKI3P17883 1432 aaKnown RBP4.5□□□□□ -1.69
VPS33YLR396C SPS1P08458 490 aa4.49□□□□□ -1.69
VPS33YLR396C PPH3P32345 308 aa4.49□□□□□ -1.69
VPS33YLR396C CDC11P32458 415 aa4.49□□□□□ -1.69
VPS33YLR396C PUB1P32588 453 aaKnown RBP RIP-Chip data4.49□□□□□ -1.69 RIP-Chip
VPS33YLR396C ALO1P54783 526 aaKnown RBP4.49□□□□□ -1.69
VPS33YLR396C YDL124WQ07551 312 aaKnown RBP4.49□□□□□ -1.69
VPS33YLR396C SVS1Q12254 260 aa4.49□□□□□ -1.69
VPS33YLR396C ERR1P0CX10 437 aa4.49□□□□□ -1.69
VPS33YLR396C ERR2P0CX11 437 aa4.49□□□□□ -1.69
VPS33YLR396C TOP3P13099 656 aa4.49□□□□□ -1.69
VPS33YLR396C ABZ1P37254 787 aaPredicted RBP4.49□□□□□ -1.69
VPS33YLR396C YBR284WP38150 797 aa4.49□□□□□ -1.69
VPS33YLR396C NMD2P38798 1089 aaKnown RBP4.49□□□□□ -1.69
VPS33YLR396C SEC26P41810 973 aaKnown RBP4.49□□□□□ -1.69
VPS33YLR396C CTH1P47976 325 aa4.49□□□□□ -1.69
VPS33YLR396C BRE4Q07660 1125 aa4.49□□□□□ -1.69
VPS33YLR396C NPP1P25353 742 aa4.48□□□□□ -1.69
VPS33YLR396C NPP2P39997 493 aa4.48□□□□□ -1.69
VPS33YLR396C INP52P50942 1183 aa4.48□□□□□ -1.69
VPS33YLR396C SRT1Q03175 343 aa4.48□□□□□ -1.69
VPS33YLR396C ADE8P04161 214 aa4.47□□□□□ -1.69
VPS33YLR396C HSP78P33416 811 aa4.47□□□□□ -1.69
VPS33YLR396C PET10P36139 283 aa4.47□□□□□ -1.69
VPS33YLR396C RFC5P38251 354 aa4.47□□□□□ -1.69
VPS33YLR396C GIC1P38785 314 aa4.47□□□□□ -1.69
VPS33YLR396C HFM1P51979 1187 aa4.47□□□□□ -1.69
VPS33YLR396C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
VPS33YLR396C RIB2Q12362 591 aaKnown RBP4.47□□□□□ -1.69
VPS33YLR396C MSD1P15179 658 aaKnown RBP4.47□□□□□ -1.69
VPS33YLR396C SCT1P32784 759 aa4.47□□□□□ -1.69
VPS33YLR396C RRP14P36080 434 aaKnown RBP4.47□□□□□ -1.69
VPS33YLR396C YRO2P38079 344 aa4.47□□□□□ -1.69
VPS33YLR396C ALG12P53730 551 aa4.47□□□□□ -1.69
VPS33YLR396C LCD1Q04377 747 aa4.47□□□□□ -1.69
VPS33YLR396C YLR125WQ12138 136 aa4.47□□□□□ -1.69
VPS33YLR396C YPR071WQ12346 211 aa4.47□□□□□ -1.69
VPS33YLR396C PHO8P11491 566 aa4.46□□□□□ -1.7
VPS33YLR396C PPG1P32838 368 aa4.46□□□□□ -1.7
VPS33YLR396C ERT1P38140 529 aa4.46□□□□□ -1.7
VPS33YLR396C TSL1P38427 1098 aaKnown RBP4.46□□□□□ -1.7
VPS33YLR396C UBP6P43593 499 aaKnown RBP4.46□□□□□ -1.7
VPS33YLR396C GYP7P48365 746 aa4.46□□□□□ -1.7
VPS33YLR396C FUN30P31380 1131 aa4.45□□□□□ -1.7
VPS33YLR396C YKR078WP36158 585 aaKnown RBP4.45□□□□□ -1.7
VPS33YLR396C OMA1P36163 345 aa4.45□□□□□ -1.7
VPS33YLR396C TOK1P40310 691 aa4.45□□□□□ -1.7
VPS33YLR396C XYL2Q07993 356 aa4.45□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 95.2 ms