RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CST9	YLR394W	NBA1	Q08229	501 aa	Known RBP	4.89	□□□□□ -1.63
CST9	YLR394W	DBP2	P24783	546 aa	Known RBP	4.89	□□□□□ -1.63
CST9	YLR394W	SBA1	P28707	216 aa	Known RBP	4.89	□□□□□ -1.63
CST9	YLR394W	MCM7	P38132	845 aa		4.89	□□□□□ -1.63
CST9	YLR394W	MEF2	P39677	819 aa		4.89	□□□□□ -1.63
CST9	YLR394W	GCN5	Q03330	439 aa		4.89	□□□□□ -1.63
CST9	YLR394W	SPO20	Q04359	397 aa		4.89	□□□□□ -1.63
CST9	YLR394W	COQ4	O13525	335 aa		4.88	□□□□□ -1.63
CST9	YLR394W	MBP1	P39678	833 aa		4.88	□□□□□ -1.63
CST9	YLR394W	SPO21	Q12411	609 aa		4.88	□□□□□ -1.63
CST9	YLR394W	YOL098C	Q12496	1037 aa		4.88	□□□□□ -1.63
CST9	YLR394W	RKM4	Q12504	494 aa		4.88	□□□□□ -1.63
CST9	YLR394W	SNF5	P18480	905 aa		4.87	□□□□□ -1.63
CST9	YLR394W	YPT53	P36019	220 aa		4.87	□□□□□ -1.63
CST9	YLR394W	CCZ1	P38273	704 aa		4.87	□□□□□ -1.63
CST9	YLR394W	YBR184W	P38299	523 aa		4.87	□□□□□ -1.63
CST9	YLR394W	HNT2	P49775	206 aa		4.87	□□□□□ -1.63
CST9	YLR394W	TNA1	P53322	534 aa		4.87	□□□□□ -1.63
CST9	YLR394W	HOS3	Q02959	697 aa	Known RBP	4.87	□□□□□ -1.63
CST9	YLR394W	SHE9	Q04172	456 aa		4.87	□□□□□ -1.63
CST9	YLR394W	YPL260W	Q08977	551 aa		4.87	□□□□□ -1.63
CST9	YLR394W	PUS9	Q12069	462 aa		4.87	□□□□□ -1.63
CST9	YLR394W	TRM2	P33753	639 aa		4.86	□□□□□ -1.63
CST9	YLR394W	MXR1	P40029	184 aa		4.86	□□□□□ -1.63
CST9	YLR394W	NSE3	Q05541	303 aa		4.86	□□□□□ -1.63
CST9	YLR394W	GNT1	Q12096	491 aa		4.86	□□□□□ -1.63
CST9	YLR394W	RAD4	P14736	754 aa		4.85	□□□□□ -1.63
CST9	YLR394W	YKL107W	P34251	309 aa		4.85	□□□□□ -1.63
CST9	YLR394W	PNT1	P38969	423 aa		4.85	□□□□□ -1.63
CST9	YLR394W	PIK1	P39104	1066 aa		4.85	□□□□□ -1.63
CST9	YLR394W	SEC26	P41810	973 aa	Known RBP	4.85	□□□□□ -1.63
CST9	YLR394W	PFD1	P46988	109 aa		4.85	□□□□□ -1.63
CST9	YLR394W	HUL5	P53119	910 aa		4.85	□□□□□ -1.63
CST9	YLR394W	RPL11A	P0C0W9	174 aa	Known RBP	4.84	□□□□□ -1.63
CST9	YLR394W	DOM34	P33309	386 aa		4.84	□□□□□ -1.63
CST9	YLR394W	RPN3	P40016	523 aa	Known RBP	4.84	□□□□□ -1.63
CST9	YLR394W	BDF2	Q07442	638 aa		4.84	□□□□□ -1.63
CST9	YLR394W	FMP25	Q08023	583 aa		4.84	□□□□□ -1.63
CST9	YLR394W	RPL11B	Q3E757	174 aa	Predicted RBP	4.84	□□□□□ -1.63
CST9	YLR394W	YTA7	P40340	1379 aa		4.84	□□□□□ -1.64
CST9	YLR394W	CYC1	P00044	109 aa	Predicted RBP	4.83	□□□□□ -1.64
CST9	YLR394W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
CST9	YLR394W	YKL151C	P36059	337 aa		4.83	□□□□□ -1.64
CST9	YLR394W	YHR020W	P38708	688 aa	Known RBP	4.83	□□□□□ -1.64
CST9	YLR394W	YJL049W	P47048	450 aa		4.83	□□□□□ -1.64
CST9	YLR394W	NAN1	Q02931	896 aa	Known RBP	4.83	□□□□□ -1.64
CST9	YLR394W	RPL8B	P29453	256 aa	Known RBP	4.82	□□□□□ -1.64
CST9	YLR394W	MRP8	P35719	219 aa		4.82	□□□□□ -1.64
CST9	YLR394W	IRR1	P40541	1150 aa		4.82	□□□□□ -1.64
CST9	YLR394W	MSE1	P48525	536 aa		4.82	□□□□□ -1.64
CST9	YLR394W	DUS4	Q06063	367 aa		4.82	□□□□□ -1.64
CST9	YLR394W	RSB1	Q08417	382 aa		4.82	□□□□□ -1.64
CST9	YLR394W	SLA2	P33338	968 aa		4.81	□□□□□ -1.64
CST9	YLR394W	PBY1	P38254	753 aa		4.81	□□□□□ -1.64
CST9	YLR394W	SLI1	P53304	468 aa		4.81	□□□□□ -1.64
CST9	YLR394W	ROT1	Q03691	256 aa		4.81	□□□□□ -1.64
CST9	YLR394W	SPP382	Q06411	708 aa	Predicted RBP	4.81	□□□□□ -1.64
CST9	YLR394W	PPM2	Q08282	695 aa		4.81	□□□□□ -1.64
CST9	YLR394W	BUD6	P41697	788 aa		4.8	□□□□□ -1.64
CST9	YLR394W	TIM54	P47045	478 aa		4.8	□□□□□ -1.64
CST9	YLR394W	PLB2	Q03674	706 aa		4.8	□□□□□ -1.64
CST9	YLR394W	RIB2	Q12362	591 aa	Known RBP	4.8	□□□□□ -1.64
CST9	YLR394W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.8	□□□□□ -1.64	not detected
CST9	YLR394W	SRM1	P21827	482 aa		4.8	□□□□□ -1.64
CST9	YLR394W	SRP40	P32583	406 aa	Predicted RBP	4.8	□□□□□ -1.64
CST9	YLR394W	CDC53	Q12018	815 aa	Known RBP	4.8	□□□□□ -1.64
CST9	YLR394W	HCM1	P25364	564 aa		4.79	□□□□□ -1.64
CST9	YLR394W	HBS1	P32769	611 aa	Known RBP	4.79	□□□□□ -1.64
CST9	YLR394W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
CST9	YLR394W	MTC3	P53077	123 aa		4.79	□□□□□ -1.64
CST9	YLR394W	UTP8	P53276	713 aa	Known RBP	4.79	□□□□□ -1.64
CST9	YLR394W	HRQ1	Q05549	1077 aa		4.79	□□□□□ -1.64
CST9	YLR394W	UBX5	Q06682	500 aa		4.79	□□□□□ -1.64
CST9	YLR394W	CIT2	P08679	460 aa		4.78	□□□□□ -1.64
CST9	YLR394W	STE11	P23561	717 aa		4.78	□□□□□ -1.64
CST9	YLR394W	YKL091C	P33324	310 aa	Known RBP	4.78	□□□□□ -1.64
CST9	YLR394W	RSP5	P39940	809 aa	Known RBP	4.78	□□□□□ -1.64
CST9	YLR394W	KRI1	P42846	591 aa	Known RBP	4.78	□□□□□ -1.64
CST9	YLR394W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
CST9	YLR394W	RPN4	Q03465	531 aa		4.78	□□□□□ -1.64
CST9	YLR394W	FLC1	Q08967	793 aa		4.78	□□□□□ -1.64
CST9	YLR394W	ACM1	Q08981	209 aa		4.78	□□□□□ -1.64
CST9	YLR394W	CIT1	P00890	479 aa		4.77	□□□□□ -1.65
CST9	YLR394W	BI4	P03879	638 aa		4.77	□□□□□ -1.65
CST9	YLR394W	GAL10	P04397	699 aa		4.77	□□□□□ -1.65
CST9	YLR394W	CDC20	P26309	610 aa		4.77	□□□□□ -1.65
CST9	YLR394W	UGA2	P38067	497 aa		4.77	□□□□□ -1.65
CST9	YLR394W	RFC5	P38251	354 aa		4.77	□□□□□ -1.65
CST9	YLR394W	GEM1	P39722	662 aa		4.77	□□□□□ -1.65
CST9	YLR394W	MNN10	P50108	393 aa	Known RBP	4.77	□□□□□ -1.65
CST9	YLR394W	SUN4	P53616	420 aa		4.77	□□□□□ -1.65
CST9	YLR394W	RSM24	Q03976	319 aa		4.77	□□□□□ -1.65
CST9	YLR394W	CMP2	P14747	604 aa		4.76	□□□□□ -1.65
CST9	YLR394W	AFR1	P33304	620 aa		4.76	□□□□□ -1.65
CST9	YLR394W	NPP2	P39997	493 aa		4.76	□□□□□ -1.65
CST9	YLR394W	ALR2	P43553	858 aa		4.76	□□□□□ -1.65
CST9	YLR394W	RTA1	P53047	317 aa		4.76	□□□□□ -1.65
CST9	YLR394W	YGR125W	P53273	1036 aa		4.76	□□□□□ -1.65
CST9	YLR394W	EAF1	Q06337	982 aa		4.76	□□□□□ -1.65
CST9	YLR394W	URN1	Q06525	465 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms