RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C DUS3Q06053 668 aaKnown RBP2.98□□□□□ -1.93
SGD1YLR336C YOR059CQ08448 450 aaKnown RBP2.98□□□□□ -1.93
SGD1YLR336C TRE1Q08919 783 aa2.98□□□□□ -1.93
SGD1YLR336C HBN1Q96VH4 193 aa2.98□□□□□ -1.93
SGD1YLR336C BI4P03879 638 aa2.97□□□□□ -1.93
SGD1YLR336C PRP9P19736 530 aaKnown RBP2.97□□□□□ -1.93
SGD1YLR336C MSB1P21339 1137 aaKnown RBP2.97□□□□□ -1.93
SGD1YLR336C PPG1P32838 368 aa2.97□□□□□ -1.93
SGD1YLR336C AFR1P33304 620 aa2.97□□□□□ -1.93
SGD1YLR336C KAE1P36132 386 aa2.97□□□□□ -1.93
SGD1YLR336C GEM1P39722 662 aa2.97□□□□□ -1.93
SGD1YLR336C CHZ1P40019 153 aaPredicted RBP2.97□□□□□ -1.93
SGD1YLR336C PRO1P32264 428 aa2.97□□□□□ -1.93
SGD1YLR336C ERT1P38140 529 aa2.97□□□□□ -1.93
SGD1YLR336C CCC2P38995 1004 aa2.97□□□□□ -1.93
SGD1YLR336C MTC3P53077 123 aa2.97□□□□□ -1.93
SGD1YLR336C ALG12P53730 551 aa2.97□□□□□ -1.93
SGD1YLR336C NPL3Q01560 414 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
SGD1YLR336C RSC58Q07979 502 aa2.97□□□□□ -1.93
SGD1YLR336C COQ4O13525 335 aa2.96□□□□□ -1.94
SGD1YLR336C CDC12P32468 407 aaKnown RBP2.96□□□□□ -1.94
SGD1YLR336C MDL2P33311 773 aa2.96□□□□□ -1.94
SGD1YLR336C PTC7P38797 343 aa2.96□□□□□ -1.94
SGD1YLR336C NMD2P38798 1089 aaKnown RBP2.96□□□□□ -1.94
SGD1YLR336C PIK1P39104 1066 aa2.96□□□□□ -1.94
SGD1YLR336C HUL4P40985 892 aa2.96□□□□□ -1.94
SGD1YLR336C SSY1Q03770 852 aa2.96□□□□□ -1.94
SGD1YLR336C GLT1Q12680 2145 aaKnown RBP2.96□□□□□ -1.94
SGD1YLR336C CYC7P00045 113 aa2.96□□□□□ -1.94
SGD1YLR336C GAL11P19659 1081 aa2.96□□□□□ -1.94
SGD1YLR336C NPP1P25353 742 aa2.96□□□□□ -1.94
SGD1YLR336C SRO9P25567 434 aaKnown RBP2.96□□□□□ -1.94
SGD1YLR336C AAR2P32357 355 aaPredicted RBP2.96□□□□□ -1.94
SGD1YLR336C GGA2P38817 585 aaKnown RBP2.96□□□□□ -1.94
SGD1YLR336C GTS1P40956 396 aa2.96□□□□□ -1.94
SGD1YLR336C OSW7P43611 510 aa2.96□□□□□ -1.94
SGD1YLR336C YPR071WQ12346 211 aa2.96□□□□□ -1.94
SGD1YLR336C PHO8P11491 566 aa2.95□□□□□ -1.94
SGD1YLR336C YKR073CP36153 106 aa2.95□□□□□ -1.94
SGD1YLR336C ABZ1P37254 787 aaPredicted RBP2.95□□□□□ -1.94
SGD1YLR336C CCZ1P38273 704 aa2.95□□□□□ -1.94
SGD1YLR336C SAH1P39954 449 aaKnown RBP2.95□□□□□ -1.94
SGD1YLR336C SIT1P39980 628 aa2.95□□□□□ -1.94
SGD1YLR336C NPP2P39997 493 aa2.95□□□□□ -1.94
SGD1YLR336C SDH1Q00711 640 aa2.95□□□□□ -1.94
SGD1YLR336C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
SGD1YLR336C BUL2Q03758 920 aaKnown RBP2.95□□□□□ -1.94
SGD1YLR336C MSD1P15179 658 aaKnown RBP2.95□□□□□ -1.94
SGD1YLR336C PPH3P32345 308 aa2.95□□□□□ -1.94
SGD1YLR336C AIM26P32858 118 aa2.95□□□□□ -1.94
SGD1YLR336C SPC42P36094 363 aa2.95□□□□□ -1.94
SGD1YLR336C ACE2P21192 770 aa2.94□□□□□ -1.94
SGD1YLR336C RRP14P36080 434 aaKnown RBP2.94□□□□□ -1.94
SGD1YLR336C MAL11P53048 616 aa2.94□□□□□ -1.94
SGD1YLR336C MAP1Q01662 387 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
SGD1YLR336C YDL124WQ07551 312 aaKnown RBP2.94□□□□□ -1.94
SGD1YLR336C MDM38Q08179 573 aa2.94□□□□□ -1.94
SGD1YLR336C MET6P05694 767 aaKnown RBP2.94□□□□□ -1.94
SGD1YLR336C YRO2P38079 344 aa2.94□□□□□ -1.94
SGD1YLR336C SRP1Q02821 542 aaKnown RBP2.94□□□□□ -1.94
SGD1YLR336C RSB1Q08417 382 aa2.94□□□□□ -1.94
SGD1YLR336C YLR125WQ12138 136 aa2.94□□□□□ -1.94
SGD1YLR336C LPX1Q12405 387 aaKnown RBP2.94□□□□□ -1.94
SGD1YLR336C CDC11P32458 415 aa2.93□□□□□ -1.94
SGD1YLR336C PET10P36139 283 aa2.93□□□□□ -1.94
SGD1YLR336C GIC1P38785 314 aa2.93□□□□□ -1.94
SGD1YLR336C UBP6P43593 499 aaKnown RBP2.93□□□□□ -1.94
SGD1YLR336C ATG13Q06628 738 aa2.93□□□□□ -1.94
SGD1YLR336C XYL2Q07993 356 aa2.93□□□□□ -1.94
SGD1YLR336C NBA1Q08229 501 aaKnown RBP2.93□□□□□ -1.94
SGD1YLR336C SVS1Q12254 260 aa2.93□□□□□ -1.94
SGD1YLR336C ADE8P04161 214 aa2.93□□□□□ -1.94
SGD1YLR336C THI4P32318 326 aa2.93□□□□□ -1.94
SGD1YLR336C BRN1P38170 754 aa2.93□□□□□ -1.94
SGD1YLR336C TSL1P38427 1098 aaKnown RBP2.93□□□□□ -1.94
SGD1YLR336C TOK1P40310 691 aa2.93□□□□□ -1.94
SGD1YLR336C HFM1P51979 1187 aa2.93□□□□□ -1.94
SGD1YLR336C SRT1Q03175 343 aa2.93□□□□□ -1.94
SGD1YLR336C RIB2Q12362 591 aaKnown RBP2.93□□□□□ -1.94
SGD1YLR336C ADP1P25371 1049 aa2.92□□□□□ -1.94
SGD1YLR336C HSV2P50079 448 aaPredicted RBP2.92□□□□□ -1.94
SGD1YLR336C SFB2P53953 876 aa2.92□□□□□ -1.94
SGD1YLR336C ALO1P54783 526 aaKnown RBP2.92□□□□□ -1.94
SGD1YLR336C LCD1Q04377 747 aa2.92□□□□□ -1.94
SGD1YLR336C MED7Q08278 222 aa2.92□□□□□ -1.94
SGD1YLR336C YLL058WQ12198 575 aa2.92□□□□□ -1.94
SGD1YLR336C TOM70P07213 617 aaKnown RBP2.92□□□□□ -1.94
SGD1YLR336C SPS1P08458 490 aa2.92□□□□□ -1.94
SGD1YLR336C TOS1P38288 455 aa2.92□□□□□ -1.94
SGD1YLR336C GDH3P39708 457 aa2.92□□□□□ -1.94
SGD1YLR336C RRT14P40470 206 aa2.92□□□□□ -1.94
SGD1YLR336C CTH1P47976 325 aa2.92□□□□□ -1.94
SGD1YLR336C TPO2P53283 614 aa2.92□□□□□ -1.94
SGD1YLR336C DOS2P54858 310 aa2.92□□□□□ -1.94
SGD1YLR336C NSI1Q12457 570 aa2.92□□□□□ -1.94
SGD1YLR336C THS1P04801 734 aaKnown RBP2.91□□□□□ -1.94
SGD1YLR336C DOM34P33309 386 aa2.91□□□□□ -1.94
SGD1YLR336C SEC26P41810 973 aaKnown RBP2.91□□□□□ -1.94
SGD1YLR336C RFC5P38251 354 aa2.91□□□□□ -1.94
SGD1YLR336C MNN1P39106 762 aa2.91□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 145.1 ms