RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeastyeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC4YLR086W ADE8P04161 214 aa1.84□□□□□ -2.11
SMC4YLR086W DBP2P24783 546 aaKnown RBP1.84□□□□□ -2.11
SMC4YLR086W MLS1P30952 554 aa1.84□□□□□ -2.11
SMC4YLR086W DOM34P33309 386 aa1.84□□□□□ -2.11
SMC4YLR086W SPO74P45819 413 aa1.84□□□□□ -2.11
SMC4YLR086W DAM1P53267 343 aa1.84□□□□□ -2.11
SMC4YLR086W YGR283CP53336 341 aaPredicted RBP1.84□□□□□ -2.11
SMC4YLR086W ESC2Q06340 456 aa1.84□□□□□ -2.11
SMC4YLR086W NTG2Q08214 380 aa1.84□□□□□ -2.11
SMC4YLR086W YGR161W-CQ3E744 92 aa1.84□□□□□ -2.11
SMC4YLR086W TCB3Q03640 1545 aaKnown RBP1.84□□□□□ -2.11
SMC4YLR086W PRI2P20457 528 aa1.84□□□□□ -2.11
SMC4YLR086W PMT3P47190 753 aa1.84□□□□□ -2.11
SMC4YLR086W YNR029CP53729 429 aaKnown RBP1.84□□□□□ -2.11
SMC4YLR086W CAF120P53836 1060 aa1.84□□□□□ -2.11
SMC4YLR086W SPO21Q12411 609 aa1.84□□□□□ -2.11
SMC4YLR086W NFS1P25374 497 aa1.84□□□□□ -2.12
SMC4YLR086W TRK2P28584 889 aa1.84□□□□□ -2.12
SMC4YLR086W TSL1P38427 1098 aaKnown RBP1.84□□□□□ -2.12
SMC4YLR086W YJR142WP47173 342 aa1.84□□□□□ -2.12
SMC4YLR086W HXT16P47185 567 aa1.84□□□□□ -2.12
SMC4YLR086W ZDS1P50111 915 aaKnown RBP1.84□□□□□ -2.12
SMC4YLR086W UBX5Q06682 500 aa1.84□□□□□ -2.12
SMC4YLR086W MDM38Q08179 573 aa1.84□□□□□ -2.12
SMC4YLR086W PHM7Q12252 991 aa1.84□□□□□ -2.12
SMC4YLR086W COQ4O13525 335 aa1.83□□□□□ -2.12
SMC4YLR086W ACE2P21192 770 aa1.83□□□□□ -2.12
SMC4YLR086W MSB1P21339 1137 aaKnown RBP1.83□□□□□ -2.12
SMC4YLR086W SPC29P33419 253 aa1.83□□□□□ -2.12
SMC4YLR086W TOM20P35180 183 aa1.83□□□□□ -2.12
SMC4YLR086W MBP1P39678 833 aa1.83□□□□□ -2.12
SMC4YLR086W ALR2P43553 858 aa1.83□□□□□ -2.12
SMC4YLR086W ALG2P43636 503 aa1.83□□□□□ -2.12
SMC4YLR086W KIP3P53086 805 aaKnown RBP1.83□□□□□ -2.12
SMC4YLR086W YGR035CP53222 116 aa1.83□□□□□ -2.12
SMC4YLR086W YNL193WP53870 558 aa1.83□□□□□ -2.12
SMC4YLR086W GSY1P23337 708 aa1.83□□□□□ -2.12
SMC4YLR086W THI4P32318 326 aa1.83□□□□□ -2.12
SMC4YLR086W ATG14P38270 344 aa1.83□□□□□ -2.12
SMC4YLR086W CCZ1P38273 704 aa1.83□□□□□ -2.12
SMC4YLR086W RRM3P38766 723 aa1.83□□□□□ -2.12
SMC4YLR086W PEX7P39108 375 aa1.83□□□□□ -2.12
SMC4YLR086W CIT3P43635 486 aa1.83□□□□□ -2.12
SMC4YLR086W APM4Q99186 491 aa1.83□□□□□ -2.12
SMC4YLR086W ERR1P0CX10 437 aa1.83□□□□□ -2.12
SMC4YLR086W ERR2P0CX11 437 aa1.83□□□□□ -2.12
SMC4YLR086W RPS4AP0CX35 261 aaKnown RBP1.83□□□□□ -2.12
SMC4YLR086W RPS4BP0CX36 261 aaKnown RBP1.83□□□□□ -2.12
SMC4YLR086W RAD53P22216 821 aa1.83□□□□□ -2.12
SMC4YLR086W ARE1P25628 610 aa1.83□□□□□ -2.12
SMC4YLR086W REC104P33323 182 aa1.83□□□□□ -2.12
SMC4YLR086W NMD3P38861 518 aaKnown RBP1.83□□□□□ -2.12
SMC4YLR086W DUG1P43616 481 aaKnown RBP1.83□□□□□ -2.12
SMC4YLR086W ATG36P46983 293 aa1.83□□□□□ -2.12
SMC4YLR086W TY4A-JP47023 414 aa1.83□□□□□ -2.12
SMC4YLR086W DNM1P54861 757 aa1.83□□□□□ -2.12
SMC4YLR086W YVC1Q12324 675 aa1.83□□□□□ -2.12
SMC4YLR086W ATG19P35193 415 aa1.83□□□□□ -2.12
SMC4YLR086W GPT2P36148 743 aa1.83□□□□□ -2.12
SMC4YLR086W SAF1P38352 637 aa1.83□□□□□ -2.12
SMC4YLR086W GIC1P38785 314 aa1.83□□□□□ -2.12
SMC4YLR086W ELA1P53861 379 aaPredicted RBP1.83□□□□□ -2.12
SMC4YLR086W SRT1Q03175 343 aa1.83□□□□□ -2.12
SMC4YLR086W MTC5Q03897 1148 aa1.83□□□□□ -2.12
SMC4YLR086W RSC58Q07979 502 aa1.83□□□□□ -2.12
SMC4YLR086W ENV7Q12003 364 aa1.83□□□□□ -2.12
SMC4YLR086W ATP4P05626 244 aa1.82□□□□□ -2.12
SMC4YLR086W MSD1P15179 658 aaKnown RBP1.82□□□□□ -2.12
SMC4YLR086W CDC48P25694 835 aaKnown RBP1.82□□□□□ -2.12
SMC4YLR086W PRO1P32264 428 aa1.82□□□□□ -2.12
SMC4YLR086W TRZ1P36159 838 aaPredicted RBP1.82□□□□□ -2.12
SMC4YLR086W YAP1801P38856 637 aa1.82□□□□□ -2.12
SMC4YLR086W SEC26P41810 973 aaKnown RBP1.82□□□□□ -2.12
SMC4YLR086W OYE3P41816 400 aaPredicted RBP1.82□□□□□ -2.12
SMC4YLR086W YJL045WP47052 634 aa1.82□□□□□ -2.12
SMC4YLR086W HSV2P50079 448 aaPredicted RBP1.82□□□□□ -2.12
SMC4YLR086W HRQ1Q05549 1077 aa1.82□□□□□ -2.12
SMC4YLR086W REH1Q06709 432 aa1.82□□□□□ -2.12
SMC4YLR086W RPP2AP05319 106 aaKnown RBP1.82□□□□□ -2.12
SMC4YLR086W SNP1Q00916 300 aaPredicted RBP1.82□□□□□ -2.12
SMC4YLR086W YDR215CQ12240 137 aa1.82□□□□□ -2.12
SMC4YLR086W SPA2P23201 1466 aaKnown RBP1.82□□□□□ -2.12
SMC4YLR086W PCL2P25693 308 aa1.82□□□□□ -2.12
SMC4YLR086W TOK1P40310 691 aa1.82□□□□□ -2.12
SMC4YLR086W MMM1P41800 426 aa1.82□□□□□ -2.12
SMC4YLR086W MSC2Q03455 724 aa1.82□□□□□ -2.12
SMC4YLR086W SRD1P09007 221 aa1.81□□□□□ -2.12
SMC4YLR086W STO1P34160 861 aaKnown RBP1.81□□□□□ -2.12
SMC4YLR086W MCM7P38132 845 aa1.81□□□□□ -2.12
SMC4YLR086W ECM21P38167 1117 aaKnown RBP1.81□□□□□ -2.12
SMC4YLR086W YHL012WP38709 493 aa1.81□□□□□ -2.12
SMC4YLR086W BOI2P39969 1040 aa1.81□□□□□ -2.12
SMC4YLR086W URM1P40554 99 aaPredicted RBP1.81□□□□□ -2.12
SMC4YLR086W GPG1P53130 126 aa1.81□□□□□ -2.12
SMC4YLR086W NOG2P53742 486 aaKnown RBP1.81□□□□□ -2.12
SMC4YLR086W YPL062WQ02781 134 aa1.81□□□□□ -2.12
SMC4YLR086W YMR074CQ04773 145 aa1.81□□□□□ -2.12
SMC4YLR086W RCL1Q08096 367 aaPredicted RBP1.81□□□□□ -2.12
SMC4YLR086W MPH2P0CD99 609 aa1.81□□□□□ -2.12
SMC4YLR086W TOP3P13099 656 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 96.4 ms