RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	ADE8	P04161	214 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	DBP2	P24783	546 aa	Known RBP	1.84	□□□□□ -2.11
SMC4	YLR086W	MLS1	P30952	554 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	DOM34	P33309	386 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	SPO74	P45819	413 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	DAM1	P53267	343 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	YGR283C	P53336	341 aa	Predicted RBP	1.84	□□□□□ -2.11
SMC4	YLR086W	ESC2	Q06340	456 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	NTG2	Q08214	380 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	YGR161W-C	Q3E744	92 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	TCB3	Q03640	1545 aa	Known RBP	1.84	□□□□□ -2.11
SMC4	YLR086W	PRI2	P20457	528 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	PMT3	P47190	753 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	YNR029C	P53729	429 aa	Known RBP	1.84	□□□□□ -2.11
SMC4	YLR086W	CAF120	P53836	1060 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	SPO21	Q12411	609 aa		1.84	□□□□□ -2.11
SMC4	YLR086W	NFS1	P25374	497 aa		1.84	□□□□□ -2.12
SMC4	YLR086W	TRK2	P28584	889 aa		1.84	□□□□□ -2.12
SMC4	YLR086W	TSL1	P38427	1098 aa	Known RBP	1.84	□□□□□ -2.12
SMC4	YLR086W	YJR142W	P47173	342 aa		1.84	□□□□□ -2.12
SMC4	YLR086W	HXT16	P47185	567 aa		1.84	□□□□□ -2.12
SMC4	YLR086W	ZDS1	P50111	915 aa	Known RBP	1.84	□□□□□ -2.12
SMC4	YLR086W	UBX5	Q06682	500 aa		1.84	□□□□□ -2.12
SMC4	YLR086W	MDM38	Q08179	573 aa		1.84	□□□□□ -2.12
SMC4	YLR086W	PHM7	Q12252	991 aa		1.84	□□□□□ -2.12
SMC4	YLR086W	COQ4	O13525	335 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ACE2	P21192	770 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	MSB1	P21339	1137 aa	Known RBP	1.83	□□□□□ -2.12
SMC4	YLR086W	SPC29	P33419	253 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	TOM20	P35180	183 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	MBP1	P39678	833 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ALR2	P43553	858 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ALG2	P43636	503 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	KIP3	P53086	805 aa	Known RBP	1.83	□□□□□ -2.12
SMC4	YLR086W	YGR035C	P53222	116 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	YNL193W	P53870	558 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	GSY1	P23337	708 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	THI4	P32318	326 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ATG14	P38270	344 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	CCZ1	P38273	704 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	RRM3	P38766	723 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	PEX7	P39108	375 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	CIT3	P43635	486 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	APM4	Q99186	491 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ERR1	P0CX10	437 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ERR2	P0CX11	437 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	RPS4A	P0CX35	261 aa	Known RBP	1.83	□□□□□ -2.12
SMC4	YLR086W	RPS4B	P0CX36	261 aa	Known RBP	1.83	□□□□□ -2.12
SMC4	YLR086W	RAD53	P22216	821 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ARE1	P25628	610 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	REC104	P33323	182 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	NMD3	P38861	518 aa	Known RBP	1.83	□□□□□ -2.12
SMC4	YLR086W	DUG1	P43616	481 aa	Known RBP	1.83	□□□□□ -2.12
SMC4	YLR086W	ATG36	P46983	293 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	TY4A-J	P47023	414 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	DNM1	P54861	757 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	YVC1	Q12324	675 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ATG19	P35193	415 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	GPT2	P36148	743 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	SAF1	P38352	637 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	GIC1	P38785	314 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ELA1	P53861	379 aa	Predicted RBP	1.83	□□□□□ -2.12
SMC4	YLR086W	SRT1	Q03175	343 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	MTC5	Q03897	1148 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	RSC58	Q07979	502 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ENV7	Q12003	364 aa		1.83	□□□□□ -2.12
SMC4	YLR086W	ATP4	P05626	244 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	MSD1	P15179	658 aa	Known RBP	1.82	□□□□□ -2.12
SMC4	YLR086W	CDC48	P25694	835 aa	Known RBP	1.82	□□□□□ -2.12
SMC4	YLR086W	PRO1	P32264	428 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	TRZ1	P36159	838 aa	Predicted RBP	1.82	□□□□□ -2.12
SMC4	YLR086W	YAP1801	P38856	637 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	SEC26	P41810	973 aa	Known RBP	1.82	□□□□□ -2.12
SMC4	YLR086W	OYE3	P41816	400 aa	Predicted RBP	1.82	□□□□□ -2.12
SMC4	YLR086W	YJL045W	P47052	634 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	HSV2	P50079	448 aa	Predicted RBP	1.82	□□□□□ -2.12
SMC4	YLR086W	HRQ1	Q05549	1077 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	REH1	Q06709	432 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	RPP2A	P05319	106 aa	Known RBP	1.82	□□□□□ -2.12
SMC4	YLR086W	SNP1	Q00916	300 aa	Predicted RBP	1.82	□□□□□ -2.12
SMC4	YLR086W	YDR215C	Q12240	137 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	SPA2	P23201	1466 aa	Known RBP	1.82	□□□□□ -2.12
SMC4	YLR086W	PCL2	P25693	308 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	TOK1	P40310	691 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	MMM1	P41800	426 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	MSC2	Q03455	724 aa		1.82	□□□□□ -2.12
SMC4	YLR086W	SRD1	P09007	221 aa		1.81	□□□□□ -2.12
SMC4	YLR086W	STO1	P34160	861 aa	Known RBP	1.81	□□□□□ -2.12
SMC4	YLR086W	MCM7	P38132	845 aa		1.81	□□□□□ -2.12
SMC4	YLR086W	ECM21	P38167	1117 aa	Known RBP	1.81	□□□□□ -2.12
SMC4	YLR086W	YHL012W	P38709	493 aa		1.81	□□□□□ -2.12
SMC4	YLR086W	BOI2	P39969	1040 aa		1.81	□□□□□ -2.12
SMC4	YLR086W	URM1	P40554	99 aa	Predicted RBP	1.81	□□□□□ -2.12
SMC4	YLR086W	GPG1	P53130	126 aa		1.81	□□□□□ -2.12
SMC4	YLR086W	NOG2	P53742	486 aa	Known RBP	1.81	□□□□□ -2.12
SMC4	YLR086W	YPL062W	Q02781	134 aa		1.81	□□□□□ -2.12
SMC4	YLR086W	YMR074C	Q04773	145 aa		1.81	□□□□□ -2.12
SMC4	YLR086W	RCL1	Q08096	367 aa	Predicted RBP	1.81	□□□□□ -2.12
SMC4	YLR086W	MPH2	P0CD99	609 aa		1.81	□□□□□ -2.12
SMC4	YLR086W	TOP3	P13099	656 aa		1.81	□□□□□ -2.12

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms