RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeast

Gene AFB1, Length 675 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
AFB1	YLR040C	PLB2	Q03674	706 aa		4.29	□□□□□ -1.72
AFB1	YLR040C	HRQ1	Q05549	1077 aa		4.29	□□□□□ -1.72
AFB1	YLR040C	CMP2	P14747	604 aa		4.28	□□□□□ -1.72
AFB1	YLR040C	GRX1	P25373	110 aa	Known RBP	4.28	□□□□□ -1.72
AFB1	YLR040C	APL1	P27351	700 aa		4.28	□□□□□ -1.72
AFB1	YLR040C	THI80	P35202	319 aa		4.28	□□□□□ -1.72
AFB1	YLR040C	HFM1	P51979	1187 aa		4.28	□□□□□ -1.72
AFB1	YLR040C	SNO2	P53823	222 aa		4.28	□□□□□ -1.72
AFB1	YLR040C	RSM24	Q03976	319 aa		4.28	□□□□□ -1.72
AFB1	YLR040C	SHE9	Q04172	456 aa		4.28	□□□□□ -1.72
AFB1	YLR040C	LAM1	P38851	1228 aa		4.27	□□□□□ -1.73
AFB1	YLR040C	MEF2	P39677	819 aa		4.27	□□□□□ -1.73
AFB1	YLR040C	UBP5	P39944	805 aa		4.27	□□□□□ -1.73
AFB1	YLR040C	ROT1	Q03691	256 aa		4.27	□□□□□ -1.73
AFB1	YLR040C	TDA5	Q06417	326 aa	Known RBP	4.27	□□□□□ -1.73
AFB1	YLR040C	XYL2	Q07993	356 aa		4.27	□□□□□ -1.73
AFB1	YLR040C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.27	□□□□□ -1.73	not detected
AFB1	YLR040C	YPL277C	Q08989	487 aa		4.27	□□□□□ -1.73
AFB1	YLR040C	SSF2	Q12153	453 aa	Predicted RBP	4.27	□□□□□ -1.73
AFB1	YLR040C	GAL10	P04397	699 aa		4.26	□□□□□ -1.73
AFB1	YLR040C	YBR184W	P38299	523 aa		4.26	□□□□□ -1.73
AFB1	YLR040C	TAT2	P38967	592 aa		4.26	□□□□□ -1.73
AFB1	YLR040C	KRI1	P42846	591 aa	Known RBP	4.26	□□□□□ -1.73
AFB1	YLR040C	PRP43	P53131	767 aa	Known RBP	4.26	□□□□□ -1.73
AFB1	YLR040C	ENV11	P53246	860 aa		4.26	□□□□□ -1.73
AFB1	YLR040C	SGD1	Q06132	899 aa		4.26	□□□□□ -1.73
AFB1	YLR040C	WRS1	Q12109	432 aa	Known RBP	4.26	□□□□□ -1.73
AFB1	YLR040C	THS1	P04801	734 aa	Known RBP	4.25	□□□□□ -1.73
AFB1	YLR040C	KIN2	P13186	1147 aa	Known RBP	4.25	□□□□□ -1.73
AFB1	YLR040C	PRP6	P19735	899 aa	Predicted RBP	4.25	□□□□□ -1.73
AFB1	YLR040C	SNF7	P39929	240 aa	Known RBP	4.25	□□□□□ -1.73
AFB1	YLR040C	SAH1	P39954	449 aa	Known RBP	4.25	□□□□□ -1.73
AFB1	YLR040C	RRT14	P40470	206 aa		4.25	□□□□□ -1.73
AFB1	YLR040C	MSC2	Q03455	724 aa		4.25	□□□□□ -1.73
AFB1	YLR040C	MDM38	Q08179	573 aa		4.25	□□□□□ -1.73
AFB1	YLR040C	RPS13	P05756	151 aa	Known RBP	4.24	□□□□□ -1.73
AFB1	YLR040C	NPP2	P39997	493 aa		4.24	□□□□□ -1.73
AFB1	YLR040C	IRR1	P40541	1150 aa		4.24	□□□□□ -1.73
AFB1	YLR040C	YDR132C	Q03900	495 aa		4.24	□□□□□ -1.73
AFB1	YLR040C	SIZ1	Q04195	904 aa		4.24	□□□□□ -1.73
AFB1	YLR040C	DUS3	Q06053	668 aa	Known RBP	4.24	□□□□□ -1.73
AFB1	YLR040C	DUS4	Q06063	367 aa		4.24	□□□□□ -1.73
AFB1	YLR040C	SOD2	P00447	233 aa		4.23	□□□□□ -1.73
AFB1	YLR040C	TOD6	P34219	525 aa		4.23	□□□□□ -1.73
AFB1	YLR040C	MRP8	P35719	219 aa		4.23	□□□□□ -1.73
AFB1	YLR040C	PBY1	P38254	753 aa		4.23	□□□□□ -1.73
AFB1	YLR040C	GIC1	P38785	314 aa		4.23	□□□□□ -1.73
AFB1	YLR040C	RIM8	P53179	542 aa		4.23	□□□□□ -1.73
AFB1	YLR040C	SRT1	Q03175	343 aa		4.23	□□□□□ -1.73
AFB1	YLR040C	YDR306C	Q06640	478 aa		4.23	□□□□□ -1.73
AFB1	YLR040C	YOR352W	Q08816	343 aa		4.23	□□□□□ -1.73
AFB1	YLR040C	CDC12	P32468	407 aa	Known RBP	4.22	□□□□□ -1.73
AFB1	YLR040C	YAP1801	P38856	637 aa		4.22	□□□□□ -1.73
AFB1	YLR040C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
AFB1	YLR040C	PFD1	P46988	109 aa		4.22	□□□□□ -1.73
AFB1	YLR040C	GCV2	P49095	1034 aa		4.22	□□□□□ -1.73
AFB1	YLR040C	SFB2	P53953	876 aa		4.22	□□□□□ -1.73
AFB1	YLR040C	GCN5	Q03330	439 aa		4.22	□□□□□ -1.73
AFB1	YLR040C	YLL058W	Q12198	575 aa		4.22	□□□□□ -1.73
AFB1	YLR040C	OSW2	Q12202	724 aa		4.22	□□□□□ -1.73
AFB1	YLR040C	CDC6	P09119	513 aa		4.21	□□□□□ -1.74
AFB1	YLR040C	SPT20	P50875	604 aa		4.21	□□□□□ -1.74
AFB1	YLR040C	GTF1	P53260	183 aa	Predicted RBP	4.21	□□□□□ -1.74
AFB1	YLR040C	SRP1	Q02821	542 aa	Known RBP	4.21	□□□□□ -1.74
AFB1	YLR040C	FMP25	Q08023	583 aa		4.21	□□□□□ -1.74
AFB1	YLR040C	RAD4	P14736	754 aa		4.2	□□□□□ -1.74
AFB1	YLR040C	NPP1	P25353	742 aa		4.2	□□□□□ -1.74
AFB1	YLR040C	RPL8B	P29453	256 aa	Known RBP	4.2	□□□□□ -1.74
AFB1	YLR040C	HBS1	P32769	611 aa	Known RBP	4.2	□□□□□ -1.74
AFB1	YLR040C	AFR1	P33304	620 aa		4.2	□□□□□ -1.74
AFB1	YLR040C	ECM21	P38167	1117 aa	Known RBP	4.2	□□□□□ -1.74
AFB1	YLR040C	TAF1	P46677	1066 aa		4.2	□□□□□ -1.74
AFB1	YLR040C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
AFB1	YLR040C	CDC20	P26309	610 aa		4.19	□□□□□ -1.74
AFB1	YLR040C	FUN30	P31380	1131 aa		4.19	□□□□□ -1.74
AFB1	YLR040C	AAR2	P32357	355 aa	Predicted RBP	4.19	□□□□□ -1.74
AFB1	YLR040C	ZRG8	P40021	1076 aa		4.19	□□□□□ -1.74
AFB1	YLR040C	MND2	P40577	368 aa		4.19	□□□□□ -1.74
AFB1	YLR040C	GYP7	P48365	746 aa		4.19	□□□□□ -1.74
AFB1	YLR040C	UTP8	P53276	713 aa	Known RBP	4.19	□□□□□ -1.74
AFB1	YLR040C	NAN1	Q02931	896 aa	Known RBP	4.19	□□□□□ -1.74
AFB1	YLR040C	GPB1	Q08886	897 aa		4.19	□□□□□ -1.74
AFB1	YLR040C	ENA1	P13587	1091 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	EMC1	P25574	760 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	PPH3	P32345	308 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	YRO2	P38079	344 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	FLR1	P38124	548 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	ERT1	P38140	529 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	TSL1	P38427	1098 aa	Known RBP	4.18	□□□□□ -1.74
AFB1	YLR040C	ALR2	P43553	858 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	ENA2	Q01896	1091 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	UBX5	Q06682	500 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	RXT3	Q07458	294 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	ACK1	Q07622	623 aa	Predicted RBP	4.18	□□□□□ -1.74
AFB1	YLR040C	TPO1	Q07824	586 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	ESC8	Q08119	714 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	ENA5	Q12691	1091 aa		4.18	□□□□□ -1.74
AFB1	YLR040C	ADE8	P04161	214 aa		4.17	□□□□□ -1.74
AFB1	YLR040C	YBR284W	P38150	797 aa		4.17	□□□□□ -1.74
AFB1	YLR040C	YGR012W	P53206	393 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms