RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C HCM1P25364 564 aa5.88□□□□□ -1.47
TVP38YKR088C CDC3P32457 520 aaKnown RBP5.88□□□□□ -1.47
TVP38YKR088C PIK1P39104 1066 aa5.88□□□□□ -1.47
TVP38YKR088C PLB2Q03674 706 aa5.88□□□□□ -1.47
TVP38YKR088C RSM24Q03976 319 aa5.88□□□□□ -1.47
TVP38YKR088C URN1Q06525 465 aaKnown RBP5.88□□□□□ -1.47
TVP38YKR088C GCD6P32501 712 aaKnown RBP5.87□□□□□ -1.47
TVP38YKR088C VPS35P34110 944 aa5.87□□□□□ -1.47
TVP38YKR088C GPB2P39717 880 aa5.87□□□□□ -1.47
TVP38YKR088C EST2Q06163 884 aa5.87□□□□□ -1.47
TVP38YKR088C RXT3Q07458 294 aa5.87□□□□□ -1.47
TVP38YKR088C PTC5Q12511 572 aa5.87□□□□□ -1.47
TVP38YKR088C IQG1Q12280 1495 aa5.87□□□□□ -1.47
TVP38YKR088C MNN10P50108 393 aaKnown RBP5.86□□□□□ -1.47
TVP38YKR088C MCM6P53091 1017 aaKnown RBP5.86□□□□□ -1.47
TVP38YKR088C YGL140CP53120 1219 aa5.86□□□□□ -1.47
TVP38YKR088C NOP7P53261 605 aaKnown RBP5.86□□□□□ -1.47
TVP38YKR088C MMS1Q06211 1407 aa5.85□□□□□ -1.47
TVP38YKR088C STE11P23561 717 aa5.85□□□□□ -1.47
TVP38YKR088C ACK1Q07622 623 aaPredicted RBP5.85□□□□□ -1.47
TVP38YKR088C SPO21Q12411 609 aa5.85□□□□□ -1.47
TVP38YKR088C TY3B-IQ7LHG5 1498 aaKnown RBP5.84□□□□□ -1.47
TVP38YKR088C GAL10P04397 699 aa5.84□□□□□ -1.47
TVP38YKR088C SSA1P10591 642 aaKnown RBP5.84□□□□□ -1.47
TVP38YKR088C CDC20P26309 610 aa5.84□□□□□ -1.47
TVP38YKR088C AFG2P32794 780 aa5.84□□□□□ -1.47
TVP38YKR088C SLI1P53304 468 aa5.84□□□□□ -1.47
TVP38YKR088C SUN4P53616 420 aa5.84□□□□□ -1.47
TVP38YKR088C TMA10Q06177 86 aa5.84□□□□□ -1.47
TVP38YKR088C YSP2Q06681 1438 aa5.83□□□□□ -1.48
TVP38YKR088C SPO14P36126 1683 aa5.83□□□□□ -1.48
TVP38YKR088C CMP2P14747 604 aa5.83□□□□□ -1.48
TVP38YKR088C SNF5P18480 905 aa5.83□□□□□ -1.48
TVP38YKR088C LST4P34239 828 aa5.83□□□□□ -1.48
TVP38YKR088C RFC5P38251 354 aa5.83□□□□□ -1.48
TVP38YKR088C RPN3P40016 523 aaKnown RBP5.83□□□□□ -1.48
TVP38YKR088C PBP1P53297 722 aaKnown RBP5.83□□□□□ -1.48
TVP38YKR088C GPB1Q08886 897 aa5.83□□□□□ -1.48
TVP38YKR088C NTO1Q12311 748 aa5.83□□□□□ -1.48
TVP38YKR088C YOR093CQ12275 1648 aa5.82□□□□□ -1.48
TVP38YKR088C HEM13P11353 328 aaKnown RBP5.82□□□□□ -1.48
TVP38YKR088C PMI40P29952 429 aaKnown RBP5.82□□□□□ -1.48
TVP38YKR088C ADI1Q03677 179 aa5.82□□□□□ -1.48
TVP38YKR088C BUD21Q08492 214 aaPredicted RBP5.82□□□□□ -1.48
TVP38YKR088C OXR1Q08952 273 aa5.82□□□□□ -1.48
TVP38YKR088C HAT1Q12341 374 aa5.82□□□□□ -1.48
TVP38YKR088C BUD3P25558 1636 aa5.81□□□□□ -1.48
TVP38YKR088C ALG3P38179 458 aa5.81□□□□□ -1.48
TVP38YKR088C AIM21P40563 679 aa5.81□□□□□ -1.48
TVP38YKR088C CTF4Q01454 927 aa5.81□□□□□ -1.48
TVP38YKR088C YPL260WQ08977 551 aa5.81□□□□□ -1.48
TVP38YKR088C NUP157P40064 1391 aaKnown RBP5.8□□□□□ -1.48
TVP38YKR088C PHO4P07270 312 aaKnown RBP5.8□□□□□ -1.48
TVP38YKR088C SEC23P15303 768 aaKnown RBP5.8□□□□□ -1.48
TVP38YKR088C LTE1P07866 1435 aa5.8□□□□□ -1.48
TVP38YKR088C DED1P06634 604 aaKnown RBP5.79□□□□□ -1.48
TVP38YKR088C MET10P39692 1035 aa5.79□□□□□ -1.48
TVP38YKR088C YPL109CQ02981 657 aa5.79□□□□□ -1.48
TVP38YKR088C KIN2P13186 1147 aaKnown RBP5.78□□□□□ -1.48
TVP38YKR088C SRM1P21827 482 aa5.78□□□□□ -1.48
TVP38YKR088C CFT1Q06632 1357 aaKnown RBP5.78□□□□□ -1.48
TVP38YKR088C PAF1P38351 445 aa5.77□□□□□ -1.49
TVP38YKR088C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.77□□□□□ -1.49not detected
TVP38YKR088C CHC1P22137 1653 aaKnown RBP5.76□□□□□ -1.49
TVP38YKR088C YRF1-1P0CX20 1796 aa5.76□□□□□ -1.49
TVP38YKR088C YRF1-5P0CX21 1796 aa5.76□□□□□ -1.49
TVP38YKR088C YRF1-8P0CX22 1796 aa5.76□□□□□ -1.49
TVP38YKR088C CDC6P09119 513 aa5.76□□□□□ -1.49
TVP38YKR088C GEF1P37020 779 aa5.76□□□□□ -1.49
TVP38YKR088C YHL050CP38721 697 aa5.76□□□□□ -1.49
TVP38YKR088C YHR219WP38900 624 aa5.76□□□□□ -1.49
TVP38YKR088C DAK2P43550 591 aa5.76□□□□□ -1.49
TVP38YKR088C PHO23P50947 330 aa5.76□□□□□ -1.49
TVP38YKR088C ORC1P54784 914 aaPredicted RBP5.76□□□□□ -1.49
TVP38YKR088C YML122CQ03207 126 aa5.76□□□□□ -1.49
TVP38YKR088C RAV1P47104 1357 aa5.76□□□□□ -1.49
TVP38YKR088C RAD53P22216 821 aa5.75□□□□□ -1.49
TVP38YKR088C YAP6Q03935 383 aa5.75□□□□□ -1.49
TVP38YKR088C PDS5Q04264 1277 aa5.75□□□□□ -1.49
TVP38YKR088C RTC1Q08281 1341 aa5.74□□□□□ -1.49
TVP38YKR088C TAF13P11747 167 aa5.74□□□□□ -1.49
TVP38YKR088C APL1P27351 700 aa5.74□□□□□ -1.49
TVP38YKR088C GTF1P53260 183 aaPredicted RBP5.74□□□□□ -1.49
TVP38YKR088C VPS62P53285 467 aa5.74□□□□□ -1.49
TVP38YKR088C YLR224WQ05947 369 aa5.74□□□□□ -1.49
TVP38YKR088C TOS4Q06266 489 aa5.74□□□□□ -1.49
TVP38YKR088C SVS1Q12254 260 aa5.74□□□□□ -1.49
TVP38YKR088C PMA1P05030 918 aaKnown RBP5.73□□□□□ -1.49
TVP38YKR088C CHS7P38843 316 aa5.73□□□□□ -1.49
TVP38YKR088C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.73□□□□□ -1.49not detected
TVP38YKR088C RIB2Q12362 591 aaKnown RBP5.73□□□□□ -1.49
TVP38YKR088C PDR11P40550 1411 aa5.73□□□□□ -1.49
TVP38YKR088C BNR1P40450 1375 aa5.71□□□□□ -1.5
TVP38YKR088C YFL054CP43549 646 aa5.71□□□□□ -1.5
TVP38YKR088C SEC7P11075 2009 aaKnown RBP5.7□□□□□ -1.5
TVP38YKR088C EMC1P25574 760 aa5.7□□□□□ -1.5
TVP38YKR088C MET4P32389 672 aa5.7□□□□□ -1.5
TVP38YKR088C DCG1P32460 244 aa5.7□□□□□ -1.5
TVP38YKR088C FAA3P39002 694 aa5.7□□□□□ -1.5
TVP38YKR088C PIC2P40035 300 aa5.7□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 72.2 ms