RNA–Protein interactions for RNA: YKR036C

CAF4, Transcript of WD40 repeat-containing protein associated with the CCR4-NOT complex, yeastyeast

Gene CAF4, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF4YKR036C PDR1P12383 1068 aa5.26□□□□□ -1.57
CAF4YKR036C TYR1P20049 452 aa5.26□□□□□ -1.57
CAF4YKR036C VAN1P23642 535 aa5.26□□□□□ -1.57
CAF4YKR036C PAP1P29468 568 aaKnown RBP5.26□□□□□ -1.57
CAF4YKR036C LOS1P33418 1100 aaPredicted RBP5.26□□□□□ -1.57
CAF4YKR036C NUP60P39705 539 aa5.26□□□□□ -1.57
CAF4YKR036C BOI2P39969 1040 aa5.26□□□□□ -1.57
CAF4YKR036C YJL171CP46992 396 aa5.26□□□□□ -1.57
CAF4YKR036C SHE10P53075 577 aa5.26□□□□□ -1.57
CAF4YKR036C YLR407WQ06070 228 aa5.26□□□□□ -1.57
CAF4YKR036C PIB1Q06651 286 aa5.26□□□□□ -1.57
CAF4YKR036C NOB1Q08444 459 aaKnown RBP5.26□□□□□ -1.57
CAF4YKR036C GNT1Q12096 491 aa5.26□□□□□ -1.57
CAF4YKR036C RIB2Q12362 591 aaKnown RBP5.26□□□□□ -1.57
CAF4YKR036C JIP3O13555 125 aa5.25□□□□□ -1.57
CAF4YKR036C PRT1P06103 763 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C SWI6P09959 803 aa5.25□□□□□ -1.57
CAF4YKR036C YMR085WP0CF18 432 aa5.25□□□□□ -1.57
CAF4YKR036C PYC1P11154 1178 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C CDC48P25694 835 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C SEC65P29478 273 aa5.25□□□□□ -1.57
CAF4YKR036C RME1P32338 300 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C MET4P32389 672 aa5.25□□□□□ -1.57
CAF4YKR036C SPT16P32558 1035 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C TOA1P32773 286 aa5.25□□□□□ -1.57
CAF4YKR036C SHM1P37292 490 aaPredicted RBP5.25□□□□□ -1.57
CAF4YKR036C EFM2P38347 419 aa5.25□□□□□ -1.57
CAF4YKR036C PPX1P38698 397 aa5.25□□□□□ -1.57
CAF4YKR036C ERC1P38767 581 aa5.25□□□□□ -1.57
CAF4YKR036C GVP36P40531 326 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C YNL247WP53852 767 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C ECM23Q02710 187 aa5.25□□□□□ -1.57
CAF4YKR036C NGL3Q03210 505 aa5.25□□□□□ -1.57
CAF4YKR036C TSR1Q07381 788 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C OSW1Q08692 278 aa5.25□□□□□ -1.57
CAF4YKR036C DCS2Q12123 353 aa5.25□□□□□ -1.57
CAF4YKR036C PGA3Q12746 312 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C GCD6P32501 712 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C CSE1P33307 960 aa5.25□□□□□ -1.57
CAF4YKR036C SUM1P46676 1062 aa5.25□□□□□ -1.57
CAF4YKR036C TMA22P47089 198 aaPredicted RBP5.25□□□□□ -1.57
CAF4YKR036C SHE4P51534 789 aa5.25□□□□□ -1.57
CAF4YKR036C HFM1P51979 1187 aa5.25□□□□□ -1.57
CAF4YKR036C SUB1P54000 292 aaKnown RBP5.25□□□□□ -1.57
CAF4YKR036C GTR1Q00582 310 aa5.25□□□□□ -1.57
CAF4YKR036C JIP4Q03361 876 aa5.25□□□□□ -1.57
CAF4YKR036C TRS120Q04183 1289 aa5.25□□□□□ -1.57
CAF4YKR036C MPC54Q08550 464 aa5.25□□□□□ -1.57
CAF4YKR036C HMI1Q12039 706 aa5.25□□□□□ -1.57
CAF4YKR036C CDC8P00572 216 aa5.24□□□□□ -1.57
CAF4YKR036C MATALPHA2P0CY08 210 aa5.24□□□□□ -1.57
CAF4YKR036C HMLALPHA2P0CY09 210 aa5.24□□□□□ -1.57
CAF4YKR036C ADE2P21264 571 aaKnown RBP5.24□□□□□ -1.57
CAF4YKR036C SEC8P32855 1065 aa5.24□□□□□ -1.57
CAF4YKR036C BUD2P33314 1104 aa5.24□□□□□ -1.57
CAF4YKR036C TIF3P34167 436 aaKnown RBP5.24□□□□□ -1.57
CAF4YKR036C LAS1P36146 502 aaPredicted RBP5.24□□□□□ -1.57
CAF4YKR036C ADE17P38009 592 aaKnown RBP5.24□□□□□ -1.57
CAF4YKR036C AMN1P38285 549 aaPredicted RBP5.24□□□□□ -1.57
CAF4YKR036C INA22P40576 216 aa5.24□□□□□ -1.57
CAF4YKR036C HXT10P43581 546 aa5.24□□□□□ -1.57
CAF4YKR036C YFH7P43591 353 aa5.24□□□□□ -1.57
CAF4YKR036C ENP2P48234 707 aaKnown RBP5.24□□□□□ -1.57
CAF4YKR036C RBL2P48606 106 aaKnown RBP5.24□□□□□ -1.57
CAF4YKR036C ERP6P53198 216 aa5.24□□□□□ -1.57
CAF4YKR036C FMP30Q02883 468 aa5.24□□□□□ -1.57
CAF4YKR036C NOC3Q07896 663 aaPredicted RBP5.24□□□□□ -1.57
CAF4YKR036C SLK19Q08581 821 aaKnown RBP5.24□□□□□ -1.57
CAF4YKR036C ADR1P07248 1323 aa5.24□□□□□ -1.57
CAF4YKR036C RAD57P25301 460 aa5.23□□□□□ -1.57
CAF4YKR036C RIB7P33312 244 aa5.23□□□□□ -1.57
CAF4YKR036C RPC37P36121 282 aa5.23□□□□□ -1.57
CAF4YKR036C KTR3P38130 404 aaPredicted RBP5.23□□□□□ -1.57
CAF4YKR036C HEK2P38199 381 aaKnown RBP RIP-Chip data5.23□□□□□ -1.57not detected
CAF4YKR036C FZO1P38297 855 aa5.23□□□□□ -1.57
CAF4YKR036C PET100P38958 111 aa5.23□□□□□ -1.57
CAF4YKR036C KAP123P40069 1113 aaKnown RBP5.23□□□□□ -1.57
CAF4YKR036C SCS2P40075 244 aaKnown RBP5.23□□□□□ -1.57
CAF4YKR036C STB1P42845 420 aa5.23□□□□□ -1.57
CAF4YKR036C PUS6P53294 404 aa5.23□□□□□ -1.57
CAF4YKR036C ERG5P54781 538 aa5.23□□□□□ -1.57
CAF4YKR036C ALO1P54783 526 aaKnown RBP5.23□□□□□ -1.57
CAF4YKR036C GPN2Q08726 347 aaPredicted RBP5.23□□□□□ -1.57
CAF4YKR036C GLE1Q12315 538 aa5.23□□□□□ -1.57
CAF4YKR036C GSC2P40989 1895 aa5.23□□□□□ -1.57
CAF4YKR036C ARG4P04076 463 aaPredicted RBP5.23□□□□□ -1.57
CAF4YKR036C SUI3P09064 285 aaKnown RBP5.23□□□□□ -1.57
CAF4YKR036C PGI1P12709 554 aaKnown RBP5.23□□□□□ -1.57
CAF4YKR036C PRP4P20053 465 aaKnown RBP5.23□□□□□ -1.57
CAF4YKR036C SCJ1P25303 377 aa5.23□□□□□ -1.57
CAF4YKR036C KTR1P27810 393 aaKnown RBP5.23□□□□□ -1.57
CAF4YKR036C NIP1P32497 812 aaKnown RBP5.23□□□□□ -1.57
CAF4YKR036C FBP26P32604 452 aa5.23□□□□□ -1.57
CAF4YKR036C NPL4P33755 580 aa5.23□□□□□ -1.57
CAF4YKR036C VPS35P34110 944 aa5.23□□□□□ -1.57
CAF4YKR036C ASH1P34233 588 aa5.23□□□□□ -1.57
CAF4YKR036C YET1P35723 206 aa5.23□□□□□ -1.57
CAF4YKR036C OAF3P36023 863 aa5.23□□□□□ -1.57
CAF4YKR036C PAM1P37304 830 aaKnown RBP5.23□□□□□ -1.57
CAF4YKR036C TDA11P38854 504 aa5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms