RNA–Protein interactions for RNA: YKR014C

YPT52, Transcript of Endosomal Rab family GTPase, yeastyeast

Gene YPT52, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT52YKR014C BI4P03879 638 aa5.09□□□□□ -1.59
YPT52YKR014C CMP2P14747 604 aa5.09□□□□□ -1.59
YPT52YKR014C ACE2P21192 770 aa5.09□□□□□ -1.59
YPT52YKR014C TSA1P34760 196 aaKnown RBP5.09□□□□□ -1.59
YPT52YKR014C AIM3P38266 947 aaKnown RBP5.09□□□□□ -1.59
YPT52YKR014C RIM8P53179 542 aa5.09□□□□□ -1.59
YPT52YKR014C PBP1P53297 722 aaKnown RBP5.09□□□□□ -1.59
YPT52YKR014C SRP1Q02821 542 aaKnown RBP5.09□□□□□ -1.59
YPT52YKR014C ESC2Q06340 456 aa5.09□□□□□ -1.59
YPT52YKR014C PRP6P19735 899 aaPredicted RBP5.08□□□□□ -1.6
YPT52YKR014C MRP8P35719 219 aa5.08□□□□□ -1.6
YPT52YKR014C VBA5P36172 582 aa5.08□□□□□ -1.6
YPT52YKR014C SIP5P40210 489 aaKnown RBP5.08□□□□□ -1.6
YPT52YKR014C TDA5Q06417 326 aaKnown RBP5.08□□□□□ -1.6
YPT52YKR014C SOD2P00447 233 aa5.07□□□□□ -1.6
YPT52YKR014C RPS13P05756 151 aaKnown RBP5.07□□□□□ -1.6
YPT52YKR014C ABZ1P37254 787 aaPredicted RBP5.07□□□□□ -1.6
YPT52YKR014C LAM1P38851 1228 aa5.07□□□□□ -1.6
YPT52YKR014C SAH1P39954 449 aaKnown RBP5.07□□□□□ -1.6
YPT52YKR014C TPO2P53283 614 aa5.07□□□□□ -1.6
YPT52YKR014C YLL058WQ12198 575 aa5.07□□□□□ -1.6
YPT52YKR014C OSW2Q12202 724 aa5.07□□□□□ -1.6
YPT52YKR014C PBY1P38254 753 aa5.06□□□□□ -1.6
YPT52YKR014C MEF2P39677 819 aa5.06□□□□□ -1.6
YPT52YKR014C MBP1P39678 833 aa5.06□□□□□ -1.6
YPT52YKR014C IRR1P40541 1150 aa5.06□□□□□ -1.6
YPT52YKR014C ROT1Q03691 256 aa5.06□□□□□ -1.6
YPT52YKR014C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
YPT52YKR014C GAL10P04397 699 aa5.05□□□□□ -1.6
YPT52YKR014C SPF1P39986 1215 aaKnown RBP5.05□□□□□ -1.6
YPT52YKR014C SPT20P50875 604 aa5.05□□□□□ -1.6
YPT52YKR014C SIZ1Q04195 904 aa5.05□□□□□ -1.6
YPT52YKR014C DUS3Q06053 668 aaKnown RBP5.05□□□□□ -1.6
YPT52YKR014C YPL277CQ08989 487 aa5.05□□□□□ -1.6
YPT52YKR014C PPH3P32345 308 aa5.04□□□□□ -1.6
YPT52YKR014C TOD6P34219 525 aa5.04□□□□□ -1.6
YPT52YKR014C YKL069WP36088 180 aa5.04□□□□□ -1.6
YPT52YKR014C HFM1P51979 1187 aa5.04□□□□□ -1.6
YPT52YKR014C GCN5Q03330 439 aa5.04□□□□□ -1.6
YPT52YKR014C MSC2Q03455 724 aa5.04□□□□□ -1.6
YPT52YKR014C RXT3Q07458 294 aa5.04□□□□□ -1.6
YPT52YKR014C SPO75Q07798 868 aa5.04□□□□□ -1.6
YPT52YKR014C YLR358CO13565 187 aa5.03□□□□□ -1.6
YPT52YKR014C ADE8P04161 214 aa5.03□□□□□ -1.6
YPT52YKR014C RPP2AP05319 106 aaKnown RBP5.03□□□□□ -1.6
YPT52YKR014C PRP9P19736 530 aaKnown RBP5.03□□□□□ -1.6
YPT52YKR014C GRX1P25373 110 aaKnown RBP5.03□□□□□ -1.6
YPT52YKR014C YDR306CQ06640 478 aa5.03□□□□□ -1.6
YPT52YKR014C MDM38Q08179 573 aa5.03□□□□□ -1.6
YPT52YKR014C ENA1P13587 1091 aa5.02□□□□□ -1.61
YPT52YKR014C FUN30P31380 1131 aa5.02□□□□□ -1.61
YPT52YKR014C AAR2P32357 355 aaPredicted RBP5.02□□□□□ -1.61
YPT52YKR014C MTC3P53077 123 aa5.02□□□□□ -1.61
YPT52YKR014C ENA2Q01896 1091 aa5.02□□□□□ -1.61
YPT52YKR014C NAN1Q02931 896 aaKnown RBP5.02□□□□□ -1.61
YPT52YKR014C HRQ1Q05549 1077 aa5.02□□□□□ -1.61
YPT52YKR014C GPB1Q08886 897 aa5.02□□□□□ -1.61
YPT52YKR014C SSF2Q12153 453 aaPredicted RBP5.02□□□□□ -1.61
YPT52YKR014C RIB2Q12362 591 aaKnown RBP5.02□□□□□ -1.61
YPT52YKR014C ENA5Q12691 1091 aa5.02□□□□□ -1.61
YPT52YKR014C SRM1P21827 482 aa5.01□□□□□ -1.61
YPT52YKR014C THI80P35202 319 aa5.01□□□□□ -1.61
YPT52YKR014C ZRG8P40021 1076 aa5.01□□□□□ -1.61
YPT52YKR014C SRT1Q03175 343 aa5.01□□□□□ -1.61
YPT52YKR014C PLB2Q03674 706 aa5.01□□□□□ -1.61
YPT52YKR014C CDC11P32458 415 aa5□□□□□ -1.61
YPT52YKR014C CDC12P32468 407 aaKnown RBP5□□□□□ -1.61
YPT52YKR014C DOM34P33309 386 aa5□□□□□ -1.61
YPT52YKR014C YKL151CP36059 337 aa5□□□□□ -1.61
YPT52YKR014C YBR184WP38299 523 aa5□□□□□ -1.61
YPT52YKR014C YAP1801P38856 637 aa5□□□□□ -1.61
YPT52YKR014C GUS1P46655 708 aaKnown RBP RIP-Chip data5□□□□□ -1.61not detected
YPT52YKR014C YJL049WP47048 450 aa5□□□□□ -1.61
YPT52YKR014C PSP2P50109 593 aaKnown RBP5□□□□□ -1.61
YPT52YKR014C GTF1P53260 183 aaPredicted RBP5□□□□□ -1.61
YPT52YKR014C YDR132CQ03900 495 aa5□□□□□ -1.61
YPT52YKR014C YPR196WQ06595 470 aa5□□□□□ -1.61
YPT52YKR014C OSH2Q12451 1283 aa5□□□□□ -1.61
YPT52YKR014C RPC82P32349 654 aa4.99□□□□□ -1.61
YPT52YKR014C ECM21P38167 1117 aaKnown RBP4.99□□□□□ -1.61
YPT52YKR014C POA1P38218 177 aa4.99□□□□□ -1.61
YPT52YKR014C ACK1Q07622 623 aaPredicted RBP4.99□□□□□ -1.61
YPT52YKR014C ESC8Q08119 714 aa4.99□□□□□ -1.61
YPT52YKR014C PRE10P21242 288 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
YPT52YKR014C YKL222CP35995 705 aa4.98□□□□□ -1.61
YPT52YKR014C YKR078WP36158 585 aaKnown RBP4.98□□□□□ -1.61
YPT52YKR014C GIC1P38785 314 aa4.98□□□□□ -1.61
YPT52YKR014C MND2P40577 368 aa4.98□□□□□ -1.61
YPT52YKR014C GYP7P48365 746 aa4.98□□□□□ -1.61
YPT52YKR014C ERP6P53198 216 aa4.98□□□□□ -1.61
YPT52YKR014C YGR012WP53206 393 aa4.98□□□□□ -1.61
YPT52YKR014C DUS4Q06063 367 aa4.98□□□□□ -1.61
YPT52YKR014C HSF1P10961 833 aa4.97□□□□□ -1.61
YPT52YKR014C STE5P32917 917 aa4.97□□□□□ -1.61
YPT52YKR014C YRO2P38079 344 aa4.97□□□□□ -1.61
YPT52YKR014C CCC2P38995 1004 aa4.97□□□□□ -1.61
YPT52YKR014C YER158CP40095 573 aa4.97□□□□□ -1.61
YPT52YKR014C NNF1P47149 201 aa4.97□□□□□ -1.61
YPT52YKR014C EAF1Q06337 982 aa4.97□□□□□ -1.61
YPT52YKR014C XYL2Q07993 356 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms