RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C ROG3P43602 733 aa4.04□□□□□ -1.76
VPS53YJL029C ASE1P50275 885 aa4.04□□□□□ -1.76
VPS53YJL029C ZPR1P53303 486 aaKnown RBP4.04□□□□□ -1.76
VPS53YJL029C CSM3Q04659 317 aa4.04□□□□□ -1.76
VPS53YJL029C PGA3Q12746 312 aaKnown RBP4.04□□□□□ -1.76
VPS53YJL029C YDR524C-BQ3E6R4 66 aa4.04□□□□□ -1.76
VPS53YJL029C POL3P15436 1097 aa4.03□□□□□ -1.76
VPS53YJL029C SWI4P25302 1093 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C PGM1P33401 570 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C ALD5P40047 520 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C FOL2P51601 243 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C YGL039WP53183 348 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C ATF2P53296 535 aa4.03□□□□□ -1.76
VPS53YJL029C BNI5P53890 448 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C YVH1Q02256 364 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C WHI4Q07655 649 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C YLL058WQ12198 575 aa4.03□□□□□ -1.76
VPS53YJL029C TIP41Q12199 356 aa4.03□□□□□ -1.76
VPS53YJL029C ARP6Q12509 438 aa4.03□□□□□ -1.76
VPS53YJL029C TIF1P10081 395 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C UBC1P21734 215 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C KIN82P25341 720 aa4.03□□□□□ -1.76
VPS53YJL029C TTI1P36097 1038 aa4.03□□□□□ -1.76
VPS53YJL029C PCI8P40512 444 aa4.03□□□□□ -1.76
VPS53YJL029C RSC8P43609 557 aaKnown RBP4.03□□□□□ -1.76
VPS53YJL029C UBP15P50101 1230 aa4.03□□□□□ -1.76
VPS53YJL029C ORC4P54791 529 aa4.03□□□□□ -1.76
VPS53YJL029C HFI1Q12060 488 aa4.03□□□□□ -1.76
VPS53YJL029C MAS2P11914 482 aa4.02□□□□□ -1.77
VPS53YJL029C ISW1P38144 1129 aa4.02□□□□□ -1.77
VPS53YJL029C SPO74P45819 413 aa4.02□□□□□ -1.77
VPS53YJL029C JJJ3P47138 172 aa4.02□□□□□ -1.77
VPS53YJL029C YEL077CQ3E7X8 1277 aa4.02□□□□□ -1.77
VPS53YJL029C SWI6P09959 803 aa4.02□□□□□ -1.77
VPS53YJL029C THR4P16120 514 aaKnown RBP4.02□□□□□ -1.77
VPS53YJL029C POT1P27796 417 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
VPS53YJL029C SUV3P32580 737 aa4.02□□□□□ -1.77
VPS53YJL029C SMY2P32909 740 aaKnown RBP4.02□□□□□ -1.77
VPS53YJL029C FLR1P38124 548 aa4.02□□□□□ -1.77
VPS53YJL029C NDT80P38830 627 aa4.02□□□□□ -1.77
VPS53YJL029C GPD2P41911 440 aaKnown RBP4.02□□□□□ -1.77
VPS53YJL029C AZR1P50080 613 aa4.02□□□□□ -1.77
VPS53YJL029C SCS3P53012 380 aa4.02□□□□□ -1.77
VPS53YJL029C MCM6P53091 1017 aaKnown RBP4.02□□□□□ -1.77
VPS53YJL029C RTC4P53850 401 aa4.02□□□□□ -1.77
VPS53YJL029C FUS2Q05670 677 aa4.02□□□□□ -1.77
VPS53YJL029C RKM4Q12504 494 aa4.02□□□□□ -1.77
VPS53YJL029C MIP1P15801 1254 aa4.01□□□□□ -1.77
VPS53YJL029C EFT1P32324 842 aaKnown RBP4.01□□□□□ -1.77
VPS53YJL029C MSS51P32335 436 aa4.01□□□□□ -1.77
VPS53YJL029C YAP1801P38856 637 aa4.01□□□□□ -1.77
VPS53YJL029C RPN10P38886 268 aaKnown RBP4.01□□□□□ -1.77
VPS53YJL029C GAA1P39012 614 aa4.01□□□□□ -1.77
VPS53YJL029C SNF7P39929 240 aaKnown RBP4.01□□□□□ -1.77
VPS53YJL029C YIR014WP40570 242 aa4.01□□□□□ -1.77
VPS53YJL029C ARP5P53946 755 aa4.01□□□□□ -1.77
VPS53YJL029C YPL150WQ12152 901 aa4.01□□□□□ -1.77
VPS53YJL029C ATG11Q12527 1178 aa4.01□□□□□ -1.77
VPS53YJL029C TCP1P12612 559 aaKnown RBP4.01□□□□□ -1.77
VPS53YJL029C PGI1P12709 554 aaKnown RBP4.01□□□□□ -1.77
VPS53YJL029C CKA2P19454 339 aa4.01□□□□□ -1.77
VPS53YJL029C MCM3P24279 971 aaKnown RBP4.01□□□□□ -1.77
VPS53YJL029C UBP11P36026 717 aa4.01□□□□□ -1.77
VPS53YJL029C JHD1P40034 492 aa4.01□□□□□ -1.77
VPS53YJL029C FIS1P40515 155 aa4.01□□□□□ -1.77
VPS53YJL029C KRI1P42846 591 aaKnown RBP4.01□□□□□ -1.77
VPS53YJL029C RPS7BP48164 190 aaKnown RBP4.01□□□□□ -1.77
VPS53YJL029C DSE4P53753 1117 aa4.01□□□□□ -1.77
VPS53YJL029C HIF1Q12373 385 aa4.01□□□□□ -1.77
VPS53YJL029C AHC1Q12433 566 aa4.01□□□□□ -1.77
VPS53YJL029C IDI1P15496 288 aa4□□□□□ -1.77
VPS53YJL029C ALG1P16661 449 aa4□□□□□ -1.77
VPS53YJL029C PRP22P24384 1145 aaKnown RBP4□□□□□ -1.77
VPS53YJL029C IRE1P32361 1115 aa4□□□□□ -1.77
VPS53YJL029C BIM1P40013 344 aa4□□□□□ -1.77
VPS53YJL029C FYV10P40492 516 aa4□□□□□ -1.77
VPS53YJL029C BUD6P41697 788 aa4□□□□□ -1.77
VPS53YJL029C PSP2P50109 593 aaKnown RBP4□□□□□ -1.77
VPS53YJL029C CDC73Q06697 393 aa4□□□□□ -1.77
VPS53YJL029C SMC5Q08204 1093 aa4□□□□□ -1.77
VPS53YJL029C ELG1Q12050 791 aa4□□□□□ -1.77
VPS53YJL029C STI1P15705 589 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
VPS53YJL029C KTR2P33550 425 aa4□□□□□ -1.77
VPS53YJL029C VID28P40547 921 aa4□□□□□ -1.77
VPS53YJL029C MMR1Q06324 491 aa4□□□□□ -1.77
VPS53YJL029C CUR1Q06469 252 aa4□□□□□ -1.77
VPS53YJL029C SLK19Q08581 821 aaKnown RBP4□□□□□ -1.77
VPS53YJL029C GET3Q12154 354 aaKnown RBP4□□□□□ -1.77
VPS53YJL029C CLN3P13365 580 aa3.99□□□□□ -1.77
VPS53YJL029C ESS1P22696 170 aa3.99□□□□□ -1.77
VPS53YJL029C MRF1P30775 413 aaPredicted RBP3.99□□□□□ -1.77
VPS53YJL029C PSE1P32337 1089 aaKnown RBP3.99□□□□□ -1.77
VPS53YJL029C BIO2P32451 375 aa3.99□□□□□ -1.77
VPS53YJL029C DPH2P32461 534 aa3.99□□□□□ -1.77
VPS53YJL029C STT3P39007 718 aaKnown RBP3.99□□□□□ -1.77
VPS53YJL029C NUP82P40368 713 aa3.99□□□□□ -1.77
VPS53YJL029C SGM1P47166 707 aa3.99□□□□□ -1.77
VPS53YJL029C ROD1Q02805 837 aa3.99□□□□□ -1.77
VPS53YJL029C VPS72Q03388 795 aa3.99□□□□□ -1.77
VPS53YJL029C CRD1Q07560 283 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms