RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W SAM1P10659 382 aaKnown RBP7.35□□□□□ -1.23
PRE3YJL001W SHP1P34223 423 aa7.35□□□□□ -1.23
PRE3YJL001W RGA1P39083 1007 aa7.35□□□□□ -1.23
PRE3YJL001W ACF4P47129 309 aa7.35□□□□□ -1.23
PRE3YJL001W MLC1P53141 149 aa7.35□□□□□ -1.23
PRE3YJL001W YGL039WP53183 348 aaKnown RBP7.35□□□□□ -1.23
PRE3YJL001W TMA64Q04600 565 aaKnown RBP7.35□□□□□ -1.23
PRE3YJL001W LAM4P38800 1345 aa7.34□□□□□ -1.23
PRE3YJL001W STE6P12866 1290 aa7.34□□□□□ -1.23
PRE3YJL001W POX1P13711 748 aa7.34□□□□□ -1.23
PRE3YJL001W FOL2P51601 243 aaKnown RBP7.34□□□□□ -1.23
PRE3YJL001W PIB2P53191 635 aa7.34□□□□□ -1.23
PRE3YJL001W SLD5Q03406 294 aa7.34□□□□□ -1.23
PRE3YJL001W DFG5Q05031 458 aa7.34□□□□□ -1.23
PRE3YJL001W YDR461C-AQ2V2P7 80 aa7.34□□□□□ -1.23
PRE3YJL001W PDR18P53756 1333 aa7.33□□□□□ -1.24
PRE3YJL001W COQ1P18900 473 aa7.33□□□□□ -1.24
PRE3YJL001W DBP7P36120 742 aaKnown RBP7.33□□□□□ -1.24
PRE3YJL001W ECM21P38167 1117 aaKnown RBP7.33□□□□□ -1.24
PRE3YJL001W PPX1P38698 397 aa7.33□□□□□ -1.24
PRE3YJL001W POL32P47110 350 aa7.33□□□□□ -1.24
PRE3YJL001W DAK1P54838 584 aaKnown RBP7.33□□□□□ -1.24
PRE3YJL001W YMR321CQ04898 105 aa7.33□□□□□ -1.24
PRE3YJL001W DUS3Q06053 668 aaKnown RBP7.33□□□□□ -1.24
PRE3YJL001W SPH1Q06160 661 aa7.33□□□□□ -1.24
PRE3YJL001W BDS1Q08347 646 aa7.33□□□□□ -1.24
PRE3YJL001W WTM2Q12206 467 aa7.33□□□□□ -1.24
PRE3YJL001W ERP3Q12403 225 aa7.33□□□□□ -1.24
PRE3YJL001W LSO1Q3E827 93 aa7.33□□□□□ -1.24
PRE3YJL001W CHO2P05374 869 aaKnown RBP7.32□□□□□ -1.24
PRE3YJL001W POT1P27796 417 aaKnown RBP RIP-Chip data7.32□□□□□ -1.24not detected
PRE3YJL001W PRO3P32263 286 aaKnown RBP7.32□□□□□ -1.24
PRE3YJL001W PBY1P38254 753 aa7.32□□□□□ -1.24
PRE3YJL001W FPR3P38911 411 aaKnown RBP7.32□□□□□ -1.24
PRE3YJL001W VPS53P47061 822 aa7.32□□□□□ -1.24
PRE3YJL001W ACE2P21192 770 aa7.31□□□□□ -1.24
PRE3YJL001W MCM4P30665 933 aaKnown RBP7.31□□□□□ -1.24
PRE3YJL001W IRE1P32361 1115 aa7.31□□□□□ -1.24
PRE3YJL001W TIM23P32897 222 aa7.31□□□□□ -1.24
PRE3YJL001W VPS8P39702 1274 aa7.31□□□□□ -1.24
PRE3YJL001W ENP2P48234 707 aaKnown RBP7.31□□□□□ -1.24
PRE3YJL001W MRD1Q06106 887 aaKnown RBP7.31□□□□□ -1.24
PRE3YJL001W NUT2Q06213 157 aa7.31□□□□□ -1.24
PRE3YJL001W TAH18Q12181 623 aa7.31□□□□□ -1.24
PRE3YJL001W TRM11Q12463 433 aa7.31□□□□□ -1.24
PRE3YJL001W RTP1Q12751 981 aa7.31□□□□□ -1.24
PRE3YJL001W MYO1P08964 1928 aa7.31□□□□□ -1.24
PRE3YJL001W RAD2P07276 1031 aa7.3□□□□□ -1.24
PRE3YJL001W TFC4P33339 1025 aa7.3□□□□□ -1.24
PRE3YJL001W MCR1P36060 302 aaKnown RBP7.3□□□□□ -1.24
PRE3YJL001W GPT2P36148 743 aa7.3□□□□□ -1.24
PRE3YJL001W YBR197CP38306 217 aa7.3□□□□□ -1.24
PRE3YJL001W OSH3P38713 996 aaKnown RBP7.3□□□□□ -1.24
PRE3YJL001W SLN1P39928 1220 aaPredicted RBP7.3□□□□□ -1.24
PRE3YJL001W JHD1P40034 492 aa7.3□□□□□ -1.24
PRE3YJL001W RSC8P43609 557 aaKnown RBP7.3□□□□□ -1.24
PRE3YJL001W ISA1Q07821 250 aaPredicted RBP7.3□□□□□ -1.24
PRE3YJL001W TKL1P23254 680 aaKnown RBP7.29□□□□□ -1.24
PRE3YJL001W ISC10P32645 267 aa7.29□□□□□ -1.24
PRE3YJL001W NMD2P38798 1089 aaKnown RBP7.29□□□□□ -1.24
PRE3YJL001W PES4P39684 611 aa7.29□□□□□ -1.24
PRE3YJL001W VPS72Q03388 795 aa7.29□□□□□ -1.24
PRE3YJL001W WHI5Q12416 295 aa7.29□□□□□ -1.24
PRE3YJL001W FRT1Q99332 602 aa7.29□□□□□ -1.24
PRE3YJL001W NUM1Q00402 2748 aa7.29□□□□□ -1.24
PRE3YJL001W CAD1P24813 409 aaKnown RBP7.28□□□□□ -1.24
PRE3YJL001W FLR1P38124 548 aa7.28□□□□□ -1.24
PRE3YJL001W DLD3P39976 496 aaKnown RBP7.28□□□□□ -1.24
PRE3YJL001W MRPS35P53292 345 aa7.28□□□□□ -1.24
PRE3YJL001W YNR014WP53719 212 aa7.28□□□□□ -1.24
PRE3YJL001W GUD1Q07729 489 aa7.28□□□□□ -1.24
PRE3YJL001W FAB1P34756 2278 aa7.27□□□□□ -1.24
PRE3YJL001W MYO3P36006 1272 aa7.27□□□□□ -1.25
PRE3YJL001W POA1P38218 177 aa7.27□□□□□ -1.25
PRE3YJL001W REG2P38232 338 aa7.27□□□□□ -1.25
PRE3YJL001W RRP8P38961 392 aaKnown RBP7.27□□□□□ -1.25
PRE3YJL001W MCM6P53091 1017 aaKnown RBP7.27□□□□□ -1.25
PRE3YJL001W FOL1P53848 824 aa7.27□□□□□ -1.25
PRE3YJL001W RPS15Q01855 142 aaKnown RBP7.27□□□□□ -1.25
PRE3YJL001W VPS30Q02948 557 aa7.27□□□□□ -1.25
PRE3YJL001W UTP4Q06679 776 aaKnown RBP7.27□□□□□ -1.25
PRE3YJL001W TEL1P38110 2787 aa7.27□□□□□ -1.25
PRE3YJL001W PHR1P05066 565 aaKnown RBP RIP-Chip data7.26□□□□□ -1.25not detected
PRE3YJL001W MCM1P11746 286 aa7.26□□□□□ -1.25
PRE3YJL001W RIT1P23796 513 aa7.26□□□□□ -1.25
PRE3YJL001W SEC8P32855 1065 aa7.26□□□□□ -1.25
PRE3YJL001W SUM1P46676 1062 aa7.26□□□□□ -1.25
PRE3YJL001W SGM1P47166 707 aa7.26□□□□□ -1.25
PRE3YJL001W CTR1P49573 406 aa7.26□□□□□ -1.25
PRE3YJL001W UFD2P54860 961 aa7.26□□□□□ -1.25
PRE3YJL001W YPQ2Q06328 317 aa7.26□□□□□ -1.25
PRE3YJL001W SUE1Q06524 206 aa7.26□□□□□ -1.25
PRE3YJL001W NUC1P08466 329 aa7.25□□□□□ -1.25
PRE3YJL001W SNA3P14359 133 aa7.25□□□□□ -1.25
PRE3YJL001W OPI1P21957 404 aa7.25□□□□□ -1.25
PRE3YJL001W DUR3P33413 735 aa7.25□□□□□ -1.25
PRE3YJL001W MET1P36150 593 aa7.25□□□□□ -1.25
PRE3YJL001W AZR1P50080 613 aa7.25□□□□□ -1.25
PRE3YJL001W RGA2Q06407 1009 aa7.25□□□□□ -1.25
PRE3YJL001W RRP15Q06511 250 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 54.8 ms