RNA–Protein interactions for RNA: YGR220C

MRPL9, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRPL9, Length 810 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRPL9	YGR220C	SVS1	Q12254	260 aa		4.79	□□□□□ -1.64
MRPL9	YGR220C	YOR131C	Q12486	218 aa		4.79	□□□□□ -1.64
MRPL9	YGR220C	KIN2	P13186	1147 aa	Known RBP	4.78	□□□□□ -1.64
MRPL9	YGR220C	SRP40	P32583	406 aa	Predicted RBP	4.78	□□□□□ -1.64
MRPL9	YGR220C	TAT2	P38967	592 aa		4.78	□□□□□ -1.64
MRPL9	YGR220C	YFL054C	P43549	646 aa		4.78	□□□□□ -1.64
MRPL9	YGR220C	TIM54	P47045	478 aa		4.78	□□□□□ -1.64
MRPL9	YGR220C	UTP8	P53276	713 aa	Known RBP	4.78	□□□□□ -1.64
MRPL9	YGR220C	NSE3	Q05541	303 aa		4.78	□□□□□ -1.64
MRPL9	YGR220C	FMP25	Q08023	583 aa		4.78	□□□□□ -1.64
MRPL9	YGR220C	HSP60	P19882	572 aa	Known RBP	4.77	□□□□□ -1.65
MRPL9	YGR220C	RPL8B	P29453	256 aa	Known RBP	4.77	□□□□□ -1.65
MRPL9	YGR220C	CDC11	P32458	415 aa		4.77	□□□□□ -1.65
MRPL9	YGR220C	SAH1	P39954	449 aa	Known RBP	4.77	□□□□□ -1.65
MRPL9	YGR220C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
MRPL9	YGR220C	ECL1	P48235	211 aa		4.77	□□□□□ -1.65
MRPL9	YGR220C	RSM24	Q03976	319 aa		4.77	□□□□□ -1.65
MRPL9	YGR220C	DUS3	Q06053	668 aa	Known RBP	4.77	□□□□□ -1.65
MRPL9	YGR220C	EAF1	Q06337	982 aa		4.77	□□□□□ -1.65
MRPL9	YGR220C	YDR306C	Q06640	478 aa		4.77	□□□□□ -1.65
MRPL9	YGR220C	CDC53	Q12018	815 aa	Known RBP	4.77	□□□□□ -1.65
MRPL9	YGR220C	BI4	P03879	638 aa		4.76	□□□□□ -1.65
MRPL9	YGR220C	ADE8	P04161	214 aa		4.76	□□□□□ -1.65
MRPL9	YGR220C	ACE2	P21192	770 aa		4.76	□□□□□ -1.65
MRPL9	YGR220C	ARE1	P25628	610 aa		4.76	□□□□□ -1.65
MRPL9	YGR220C	PPH3	P32345	308 aa		4.76	□□□□□ -1.65
MRPL9	YGR220C	AAR2	P32357	355 aa	Predicted RBP	4.76	□□□□□ -1.65
MRPL9	YGR220C	POL12	P38121	705 aa	Predicted RBP	4.76	□□□□□ -1.65
MRPL9	YGR220C	YGR125W	P53273	1036 aa		4.76	□□□□□ -1.65
MRPL9	YGR220C	YOR352W	Q08816	343 aa		4.76	□□□□□ -1.65
MRPL9	YGR220C	DFG16	Q99234	619 aa		4.76	□□□□□ -1.65
MRPL9	YGR220C	APL1	P27351	700 aa		4.75	□□□□□ -1.65
MRPL9	YGR220C	GGA2	P38817	585 aa	Known RBP	4.75	□□□□□ -1.65
MRPL9	YGR220C	SIT1	P39980	628 aa		4.75	□□□□□ -1.65
MRPL9	YGR220C	HUL4	P40985	892 aa		4.75	□□□□□ -1.65
MRPL9	YGR220C	ALR2	P43553	858 aa		4.75	□□□□□ -1.65
MRPL9	YGR220C	PFD1	P46988	109 aa		4.75	□□□□□ -1.65
MRPL9	YGR220C	HUL5	P53119	910 aa		4.75	□□□□□ -1.65
MRPL9	YGR220C	BDF2	Q07442	638 aa		4.75	□□□□□ -1.65
MRPL9	YGR220C	YTA7	P40340	1379 aa		4.75	□□□□□ -1.65
MRPL9	YGR220C	CDC12	P32468	407 aa	Known RBP	4.74	□□□□□ -1.65
MRPL9	YGR220C	YKL091C	P33324	310 aa	Known RBP	4.74	□□□□□ -1.65
MRPL9	YGR220C	IOC3	P43596	787 aa		4.74	□□□□□ -1.65
MRPL9	YGR220C	OSW7	P43611	510 aa		4.74	□□□□□ -1.65
MRPL9	YGR220C	SNO2	P53823	222 aa		4.74	□□□□□ -1.65
MRPL9	YGR220C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
MRPL9	YGR220C	HRQ1	Q05549	1077 aa		4.74	□□□□□ -1.65
MRPL9	YGR220C	FPR4	Q06205	392 aa	Predicted RBP	4.74	□□□□□ -1.65
MRPL9	YGR220C	MDM38	Q08179	573 aa		4.74	□□□□□ -1.65
MRPL9	YGR220C	FLC1	Q08967	793 aa		4.74	□□□□□ -1.65
MRPL9	YGR220C	OSW2	Q12202	724 aa		4.74	□□□□□ -1.65
MRPL9	YGR220C	CIT1	P00890	479 aa		4.73	□□□□□ -1.65
MRPL9	YGR220C	FUN30	P31380	1131 aa		4.73	□□□□□ -1.65
MRPL9	YGR220C	YKR078W	P36158	585 aa	Known RBP	4.73	□□□□□ -1.65
MRPL9	YGR220C	MTC3	P53077	123 aa		4.73	□□□□□ -1.65
MRPL9	YGR220C	YDL124W	Q07551	312 aa	Known RBP	4.73	□□□□□ -1.65
MRPL9	YGR220C	RPC82	P32349	654 aa		4.72	□□□□□ -1.65
MRPL9	YGR220C	YKL151C	P36059	337 aa		4.72	□□□□□ -1.65
MRPL9	YGR220C	YHR020W	P38708	688 aa	Known RBP	4.72	□□□□□ -1.65
MRPL9	YGR220C	ETP1	P38748	585 aa	Known RBP	4.72	□□□□□ -1.65
MRPL9	YGR220C	CCC2	P38995	1004 aa		4.72	□□□□□ -1.65
MRPL9	YGR220C	CHZ1	P40019	153 aa	Predicted RBP	4.72	□□□□□ -1.65
MRPL9	YGR220C	SRT1	Q03175	343 aa		4.72	□□□□□ -1.65
MRPL9	YGR220C	RPN4	Q03465	531 aa		4.72	□□□□□ -1.65
MRPL9	YGR220C	SIZ1	Q04195	904 aa		4.72	□□□□□ -1.65
MRPL9	YGR220C	GAL11	P19659	1081 aa		4.71	□□□□□ -1.66
MRPL9	YGR220C	HBS1	P32769	611 aa	Known RBP	4.71	□□□□□ -1.66
MRPL9	YGR220C	LRG1	P35688	1017 aa		4.71	□□□□□ -1.66
MRPL9	YGR220C	ABZ1	P37254	787 aa	Predicted RBP	4.71	□□□□□ -1.66
MRPL9	YGR220C	YRO2	P38079	344 aa		4.71	□□□□□ -1.66
MRPL9	YGR220C	RSP5	P39940	809 aa	Known RBP	4.71	□□□□□ -1.66
MRPL9	YGR220C	CCM1	P48237	864 aa	Predicted RBP	4.71	□□□□□ -1.66
MRPL9	YGR220C	GYP7	P48365	746 aa		4.71	□□□□□ -1.66
MRPL9	YGR220C	HFM1	P51979	1187 aa		4.71	□□□□□ -1.66
MRPL9	YGR220C	MSC2	Q03455	724 aa		4.71	□□□□□ -1.66
MRPL9	YGR220C	LCD1	Q04377	747 aa		4.71	□□□□□ -1.66
MRPL9	YGR220C	UBX5	Q06682	500 aa		4.71	□□□□□ -1.66
MRPL9	YGR220C	CYC1	P00044	109 aa	Predicted RBP	4.7	□□□□□ -1.66
MRPL9	YGR220C	YAP1801	P38856	637 aa		4.7	□□□□□ -1.66
MRPL9	YGR220C	PBP1	P53297	722 aa	Known RBP	4.7	□□□□□ -1.66
MRPL9	YGR220C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
MRPL9	YGR220C	MRPL22	P53881	309 aa		4.7	□□□□□ -1.66
MRPL9	YGR220C	SGD1	Q06132	899 aa		4.7	□□□□□ -1.66
MRPL9	YGR220C	RPP2A	P05319	106 aa	Known RBP	4.69	□□□□□ -1.66
MRPL9	YGR220C	CMP2	P14747	604 aa		4.69	□□□□□ -1.66
MRPL9	YGR220C	CDC48	P25694	835 aa	Known RBP	4.69	□□□□□ -1.66
MRPL9	YGR220C	DOM34	P33309	386 aa		4.69	□□□□□ -1.66
MRPL9	YGR220C	GIC1	P38785	314 aa		4.69	□□□□□ -1.66
MRPL9	YGR220C	YER158C	P40095	573 aa		4.69	□□□□□ -1.66
MRPL9	YGR220C	NIT1	P40447	199 aa		4.69	□□□□□ -1.66
MRPL9	YGR220C	PRP43	P53131	767 aa	Known RBP	4.69	□□□□□ -1.66
MRPL9	YGR220C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
MRPL9	YGR220C	TAF8	Q03750	510 aa		4.69	□□□□□ -1.66
MRPL9	YGR220C	YDL177C	Q12257	170 aa		4.69	□□□□□ -1.66
MRPL9	YGR220C	HBN1	Q96VH4	193 aa		4.69	□□□□□ -1.66
MRPL9	YGR220C	CAN1	P04817	590 aa		4.68	□□□□□ -1.66
MRPL9	YGR220C	SEG2	P34250	1132 aa		4.68	□□□□□ -1.66
MRPL9	YGR220C	ECM21	P38167	1117 aa	Known RBP	4.68	□□□□□ -1.66
MRPL9	YGR220C	YPR196W	Q06595	470 aa		4.68	□□□□□ -1.66
MRPL9	YGR220C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.68	□□□□□ -1.66	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms