RNA–Protein interactions for RNA: YFR049W

YMR31, Transcript of Mitochondrial ribosomal protein of the small subunit, yeast

Gene YMR31, Length 372 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR31	YFR049W	ROG3	P43602	733 aa		3.32	□□□□□ -1.88
YMR31	YFR049W	GPG1	P53130	126 aa		3.32	□□□□□ -1.88
YMR31	YFR049W	MTC5	Q03897	1148 aa		3.32	□□□□□ -1.88
YMR31	YFR049W	LCD1	Q04377	747 aa		3.32	□□□□□ -1.88
YMR31	YFR049W	YLR001C	Q07895	862 aa		3.32	□□□□□ -1.88
YMR31	YFR049W	TRE2	Q08693	809 aa		3.32	□□□□□ -1.88
YMR31	YFR049W	YPL260W	Q08977	551 aa		3.32	□□□□□ -1.88
YMR31	YFR049W	RPL11B	Q3E757	174 aa	Predicted RBP	3.32	□□□□□ -1.88
YMR31	YFR049W	SRD1	P09007	221 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	TRK1	P12685	1235 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	DBP2	P24783	546 aa	Known RBP	3.31	□□□□□ -1.88
YMR31	YFR049W	EUG1	P32474	517 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	HIR1	P32479	840 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	PRP19	P32523	503 aa	Known RBP	3.31	□□□□□ -1.88
YMR31	YFR049W	REC104	P33323	182 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	SPC29	P33419	253 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	ERT1	P38140	529 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	YBR238C	P38330	731 aa	Known RBP	3.31	□□□□□ -1.88
YMR31	YFR049W	PNT1	P38969	423 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	SIT1	P39980	628 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	POL5	P39985	1022 aa	Known RBP	3.31	□□□□□ -1.88
YMR31	YFR049W	PEX14	P53112	341 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	MET13	P53128	600 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	TY1A-MR1	Q04215	440 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	VMS1	Q04311	632 aa	Known RBP	3.31	□□□□□ -1.88
YMR31	YFR049W	RSA3	Q05942	220 aa	Known RBP	3.31	□□□□□ -1.88
YMR31	YFR049W	RGA2	Q06407	1009 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	YOR378W	Q08902	515 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	ELG1	Q12050	791 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	YDR461C-A	Q2V2P7	80 aa		3.31	□□□□□ -1.88
YMR31	YFR049W	ERS1	P17261	260 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	SFL1	P20134	766 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	TRX2	P22803	104 aa	Known RBP	3.3	□□□□□ -1.88
YMR31	YFR049W	PWP2	P25635	923 aa	Known RBP	3.3	□□□□□ -1.88
YMR31	YFR049W	TFC4	P33339	1025 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	MAE1	P36013	669 aa	Known RBP	3.3	□□□□□ -1.88
YMR31	YFR049W	FUI1	P38196	639 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	YBR071W	P38243	211 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.3	□□□□□ -1.88	RIP-Chip
YMR31	YFR049W	MGS1	P40151	587 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	TOK1	P40310	691 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	GPP1	P41277	250 aa	Known RBP	3.3	□□□□□ -1.88
YMR31	YFR049W	BRE2	P43132	505 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	LYS5	P50113	272 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	COG6	P53959	839 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	MTQ2	Q03920	221 aa	Predicted RBP	3.3	□□□□□ -1.88
YMR31	YFR049W	YLR257W	Q06146	321 aa	Known RBP	3.3	□□□□□ -1.88
YMR31	YFR049W	SYT1	Q06836	1226 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	GUD1	Q07729	489 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	MPD2	Q99316	277 aa		3.3	□□□□□ -1.88
YMR31	YFR049W	NAR1	P23503	491 aa	Known RBP	3.29	□□□□□ -1.88
YMR31	YFR049W	PCL2	P25693	308 aa		3.29	□□□□□ -1.88
YMR31	YFR049W	PRO1	P32264	428 aa		3.29	□□□□□ -1.88
YMR31	YFR049W	STO1	P34160	861 aa	Known RBP	3.29	□□□□□ -1.88
YMR31	YFR049W	VPS24	P36095	224 aa	Known RBP	3.29	□□□□□ -1.88
YMR31	YFR049W	PGM2	P37012	569 aa	Known RBP	3.29	□□□□□ -1.88
YMR31	YFR049W	ALG14	P38242	237 aa		3.29	□□□□□ -1.88
YMR31	YFR049W	YJR096W	P47137	282 aa		3.29	□□□□□ -1.88
YMR31	YFR049W	KIP3	P53086	805 aa	Known RBP	3.29	□□□□□ -1.88
YMR31	YFR049W	CEF1	Q03654	590 aa	Predicted RBP	3.29	□□□□□ -1.88
YMR31	YFR049W	DOT1	Q04089	582 aa	Known RBP	3.29	□□□□□ -1.88
YMR31	YFR049W	RSC3	Q06639	885 aa		3.29	□□□□□ -1.88
YMR31	YFR049W	SLP1	Q12232	587 aa		3.29	□□□□□ -1.88
YMR31	YFR049W	TY4B-P	A0A0B7P3V8	1104 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	THS1	P04801	734 aa	Known RBP	3.28	□□□□□ -1.88
YMR31	YFR049W	PDC5	P16467	563 aa	Known RBP	3.28	□□□□□ -1.88
YMR31	YFR049W	NPP1	P25353	742 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	PER1	P25625	357 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	PLC1	P32383	869 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	CDC12	P32468	407 aa	Known RBP	3.28	□□□□□ -1.88
YMR31	YFR049W	PEA2	P40091	420 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	CAF16	P43569	289 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	GYP8	P43570	497 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	CCM1	P48237	864 aa	Predicted RBP	3.28	□□□□□ -1.88
YMR31	YFR049W	NIT3	P49954	291 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	AIM14	P53109	570 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	DAM1	P53267	343 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	YGR283C	P53336	341 aa	Predicted RBP	3.28	□□□□□ -1.88
YMR31	YFR049W	ATG16	Q03818	150 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	GIS4	Q04233	774 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	YDR514C	Q04408	483 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	HRQ1	Q05549	1077 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	MET7	Q08645	548 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	ACM1	Q08981	209 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	YOR223W	Q12015	292 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	TY4A-H	Q6Q5P6	413 aa		3.28	□□□□□ -1.88
YMR31	YFR049W	ATP4	P05626	244 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	SST2	P11972	698 aa	Known RBP	3.27	□□□□□ -1.89
YMR31	YFR049W	KNS1	P32350	737 aa	Predicted RBP	3.27	□□□□□ -1.89
YMR31	YFR049W	AFR1	P33304	620 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	YEL1	P34225	687 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	MTC2	P34246	357 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	NNK1	P36003	928 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	UGA2	P38067	497 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	CKB2	P38930	258 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	DOT6	P40059	670 aa	Known RBP	3.27	□□□□□ -1.89
YMR31	YFR049W	YJL045W	P47052	634 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	YNL034W	P53963	612 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	YNL018C	P53976	612 aa		3.27	□□□□□ -1.89
YMR31	YFR049W	HOS3	Q02959	697 aa	Known RBP	3.27	□□□□□ -1.89

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms