RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W SRP1Q02821 542 aaKnown RBP6.2□□□□□ -1.42
UBC6YER100W YMR265CQ03508 461 aaKnown RBP6.2□□□□□ -1.42
UBC6YER100W SND1Q04007 877 aa6.2□□□□□ -1.42
UBC6YER100W DUS3Q06053 668 aaKnown RBP6.2□□□□□ -1.42
UBC6YER100W OPT2Q06593 877 aa6.2□□□□□ -1.42
UBC6YER100W YPR071WQ12346 211 aa6.2□□□□□ -1.42
UBC6YER100W CDC9P04819 755 aa6.19□□□□□ -1.42
UBC6YER100W RET1P22276 1149 aaKnown RBP6.19□□□□□ -1.42
UBC6YER100W PCL2P25693 308 aa6.19□□□□□ -1.42
UBC6YER100W MTC2P34246 357 aa6.19□□□□□ -1.42
UBC6YER100W POL5P39985 1022 aaKnown RBP6.19□□□□□ -1.42
UBC6YER100W LYS5P50113 272 aa6.19□□□□□ -1.42
UBC6YER100W TGL2P54857 326 aa6.19□□□□□ -1.42
UBC6YER100W ATP25Q03153 612 aa6.19□□□□□ -1.42
UBC6YER100W MTQ2Q03920 221 aaPredicted RBP6.19□□□□□ -1.42
UBC6YER100W TY1A-BLQ12266 440 aa6.19□□□□□ -1.42
UBC6YER100W RPL11AP0C0W9 174 aaKnown RBP6.18□□□□□ -1.42
UBC6YER100W YER152CP10356 443 aa6.18□□□□□ -1.42
UBC6YER100W QNS1P38795 714 aaKnown RBP6.18□□□□□ -1.42
UBC6YER100W SAH1P39954 449 aaKnown RBP6.18□□□□□ -1.42
UBC6YER100W RPN3P40016 523 aaKnown RBP6.18□□□□□ -1.42
UBC6YER100W CAF16P43569 289 aa6.18□□□□□ -1.42
UBC6YER100W DUG1P43616 481 aaKnown RBP6.18□□□□□ -1.42
UBC6YER100W DAS1P47005 663 aa6.18□□□□□ -1.42
UBC6YER100W YRB30P53107 440 aaPredicted RBP6.18□□□□□ -1.42
UBC6YER100W PEX14P53112 341 aa6.18□□□□□ -1.42
UBC6YER100W MET13P53128 600 aa6.18□□□□□ -1.42
UBC6YER100W SCW11P53189 542 aa6.18□□□□□ -1.42
UBC6YER100W SOK2P53438 785 aaPredicted RBP6.18□□□□□ -1.42
UBC6YER100W YNR063WP53749 607 aa6.18□□□□□ -1.42
UBC6YER100W ATG16Q03818 150 aa6.18□□□□□ -1.42
UBC6YER100W NKP1Q12493 238 aa6.18□□□□□ -1.42
UBC6YER100W RPL11BQ3E757 174 aaPredicted RBP6.18□□□□□ -1.42
UBC6YER100W PHR1P05066 565 aaKnown RBP RIP-Chip data6.17□□□□□ -1.42not detected
UBC6YER100W HIR1P32479 840 aa6.17□□□□□ -1.42
UBC6YER100W AFR1P33304 620 aa6.17□□□□□ -1.42
UBC6YER100W BOI2P39969 1040 aa6.17□□□□□ -1.42
UBC6YER100W GIP2P40036 548 aa6.17□□□□□ -1.42
UBC6YER100W IES5P40060 125 aa6.17□□□□□ -1.42
UBC6YER100W CCM1P48237 864 aaPredicted RBP6.17□□□□□ -1.42
UBC6YER100W YGR021WP53212 290 aa6.17□□□□□ -1.42
UBC6YER100W DAM1P53267 343 aa6.17□□□□□ -1.42
UBC6YER100W YGR283CP53336 341 aaPredicted RBP6.17□□□□□ -1.42
UBC6YER100W CUZ1P53899 274 aa6.17□□□□□ -1.42
UBC6YER100W MTC5Q03897 1148 aa6.17□□□□□ -1.42
UBC6YER100W ECM16Q04217 1267 aaKnown RBP6.17□□□□□ -1.42
UBC6YER100W TMA64Q04600 565 aaKnown RBP6.17□□□□□ -1.42
UBC6YER100W AVO1Q08236 1176 aa6.17□□□□□ -1.42
UBC6YER100W SFL1P20134 766 aa6.16□□□□□ -1.42
UBC6YER100W TRX2P22803 104 aaKnown RBP6.16□□□□□ -1.42
UBC6YER100W DBP2P24783 546 aaKnown RBP6.16□□□□□ -1.42
UBC6YER100W STO1P34160 861 aaKnown RBP6.16□□□□□ -1.42
UBC6YER100W EMC3P36039 253 aa6.16□□□□□ -1.42
UBC6YER100W YRO2P38079 344 aa6.16□□□□□ -1.42
UBC6YER100W TOK1P40310 691 aa6.16□□□□□ -1.42
UBC6YER100W YGR045CP53229 120 aa6.16□□□□□ -1.42
UBC6YER100W RSA3Q05942 220 aaKnown RBP6.16□□□□□ -1.42
UBC6YER100W YLL058WQ12198 575 aa6.16□□□□□ -1.42
UBC6YER100W NYV1Q12255 253 aa6.16□□□□□ -1.42
UBC6YER100W SPO21Q12411 609 aa6.16□□□□□ -1.42
UBC6YER100W SST2P11972 698 aaKnown RBP6.15□□□□□ -1.42
UBC6YER100W NFS1P25374 497 aa6.15□□□□□ -1.42
UBC6YER100W KIP1P28742 1111 aa6.15□□□□□ -1.42
UBC6YER100W PLC1P32383 869 aa6.15□□□□□ -1.42
UBC6YER100W REC104P33323 182 aa6.15□□□□□ -1.42
UBC6YER100W YKR078WP36158 585 aaKnown RBP6.15□□□□□ -1.42
UBC6YER100W CKB2P38930 258 aa6.15□□□□□ -1.42
UBC6YER100W UBX4P54730 416 aa6.15□□□□□ -1.42
UBC6YER100W TY1A-MR1Q04215 440 aa6.15□□□□□ -1.42
UBC6YER100W SYT1Q06836 1226 aa6.15□□□□□ -1.42
UBC6YER100W ACM1Q08981 209 aa6.15□□□□□ -1.42
UBC6YER100W YTM1Q12024 460 aaPredicted RBP6.15□□□□□ -1.42
UBC6YER100W ELG1Q12050 791 aa6.15□□□□□ -1.42
UBC6YER100W PIF1P07271 859 aa6.14□□□□□ -1.43
UBC6YER100W RAD18P10862 487 aa6.14□□□□□ -1.43
UBC6YER100W SAC7P17121 654 aa6.14□□□□□ -1.43
UBC6YER100W SLA2P33338 968 aa6.14□□□□□ -1.43
UBC6YER100W PCM1P38628 557 aaKnown RBP6.14□□□□□ -1.43
UBC6YER100W GYP8P43570 497 aa6.14□□□□□ -1.43
UBC6YER100W ROG3P43602 733 aa6.14□□□□□ -1.43
UBC6YER100W TY4A-JP47023 414 aa6.14□□□□□ -1.43
UBC6YER100W YJR096WP47137 282 aa6.14□□□□□ -1.43
UBC6YER100W YNL034WP53963 612 aa6.14□□□□□ -1.43
UBC6YER100W YNL018CP53976 612 aa6.14□□□□□ -1.43
UBC6YER100W ADE12P80210 433 aaKnown RBP6.14□□□□□ -1.43
UBC6YER100W GCR2Q01722 534 aa6.14□□□□□ -1.43
UBC6YER100W GIS4Q04233 774 aa6.14□□□□□ -1.43
UBC6YER100W GIN4Q12263 1142 aa6.14□□□□□ -1.43
UBC6YER100W YBR238CP38330 731 aaKnown RBP6.13□□□□□ -1.43
UBC6YER100W GZF3P42944 551 aaKnown RBP6.13□□□□□ -1.43
UBC6YER100W PIP2P52960 996 aa6.13□□□□□ -1.43
UBC6YER100W PBP1P53297 722 aaKnown RBP6.13□□□□□ -1.43
UBC6YER100W SNP1Q00916 300 aaPredicted RBP6.13□□□□□ -1.43
UBC6YER100W RSC3Q06639 885 aa6.13□□□□□ -1.43
UBC6YER100W PGI1P12709 554 aaKnown RBP6.12□□□□□ -1.43
UBC6YER100W AEP2P22136 580 aa6.12□□□□□ -1.43
UBC6YER100W KNS1P32350 737 aaPredicted RBP6.12□□□□□ -1.43
UBC6YER100W NNK1P36003 928 aa6.12□□□□□ -1.43
UBC6YER100W YKL151CP36059 337 aa6.12□□□□□ -1.43
UBC6YER100W NIT2P47016 307 aa6.12□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 41.9 ms