RNA–Protein interactions for RNA: YER072W

VTC1, Transcript of Subunit of the vacuolar transporter chaperone (VTC) complex, yeastyeast

Gene VTC1, Length 390 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VTC1YER072W HGH1P48362 394 aaKnown RBP3.04□□□□□ -1.92
VTC1YER072W MDG1P53885 366 aa3.04□□□□□ -1.92
VTC1YER072W ORC1P54784 914 aaPredicted RBP3.04□□□□□ -1.92
VTC1YER072W TPP1Q03796 238 aa3.04□□□□□ -1.92
VTC1YER072W YDR132CQ03900 495 aa3.04□□□□□ -1.92
VTC1YER072W AVO1Q08236 1176 aa3.04□□□□□ -1.92
VTC1YER072W PMD1P32634 1753 aa3.03□□□□□ -1.92
VTC1YER072W YLR278CQ05854 1341 aa3.03□□□□□ -1.92
VTC1YER072W THS1P04801 734 aaKnown RBP3.03□□□□□ -1.92
VTC1YER072W LPD1P09624 499 aaKnown RBP3.03□□□□□ -1.92
VTC1YER072W RET1P22276 1149 aaKnown RBP3.03□□□□□ -1.92
VTC1YER072W HSP104P31539 908 aaKnown RBP3.03□□□□□ -1.92
VTC1YER072W SMY1P32364 656 aaKnown RBP3.03□□□□□ -1.92
VTC1YER072W SHC1P39000 512 aa3.03□□□□□ -1.92
VTC1YER072W SPT20P50875 604 aa3.03□□□□□ -1.92
VTC1YER072W DSD1P53095 428 aa3.03□□□□□ -1.92
VTC1YER072W DUS1P53759 423 aaKnown RBP3.03□□□□□ -1.92
VTC1YER072W RAT1Q02792 1006 aaKnown RBP3.03□□□□□ -1.92
VTC1YER072W ERO1Q03103 563 aa3.03□□□□□ -1.92
VTC1YER072W RMT2Q03305 412 aa3.03□□□□□ -1.92
VTC1YER072W HIM1Q06674 414 aa3.03□□□□□ -1.92
VTC1YER072W FAS2P19097 1887 aaKnown RBP3.03□□□□□ -1.93
VTC1YER072W TOP1P04786 769 aa3.02□□□□□ -1.93
VTC1YER072W SAM35P14693 329 aa3.02□□□□□ -1.93
VTC1YER072W KAR2P16474 682 aaKnown RBP3.02□□□□□ -1.93
VTC1YER072W RRN6P32786 894 aa3.02□□□□□ -1.93
VTC1YER072W SUN4P53616 420 aa3.02□□□□□ -1.93
VTC1YER072W DIB1Q06819 143 aaPredicted RBP3.02□□□□□ -1.93
VTC1YER072W CTI6Q08923 506 aa3.02□□□□□ -1.93
VTC1YER072W HKR1P41809 1802 aa3.01□□□□□ -1.93
VTC1YER072W DUR3P33413 735 aa3.01□□□□□ -1.93
VTC1YER072W YHL012WP38709 493 aa3.01□□□□□ -1.93
VTC1YER072W BUD27P43573 796 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
VTC1YER072W CWC15Q03772 175 aaKnown RBP3.01□□□□□ -1.93
VTC1YER072W IRC3Q06683 689 aa3.01□□□□□ -1.93
VTC1YER072W BDF2Q07442 638 aa3.01□□□□□ -1.93
VTC1YER072W GRX6Q12438 231 aa3.01□□□□□ -1.93
VTC1YER072W RLF2Q12495 606 aa3.01□□□□□ -1.93
VTC1YER072W RAD53P22216 821 aa3□□□□□ -1.93
VTC1YER072W PUP1P25043 261 aa3□□□□□ -1.93
VTC1YER072W KCC4P25389 1037 aa3□□□□□ -1.93
VTC1YER072W ICL1P28240 557 aaPredicted RBP3□□□□□ -1.93
VTC1YER072W YKU70P32807 602 aa3□□□□□ -1.93
VTC1YER072W AIM26P32858 118 aa3□□□□□ -1.93
VTC1YER072W SER1P33330 395 aaKnown RBP3□□□□□ -1.93
VTC1YER072W AKL1P38080 1108 aaKnown RBP3□□□□□ -1.93
VTC1YER072W YFR016CP43597 1233 aaKnown RBP3□□□□□ -1.93
VTC1YER072W GCN5Q03330 439 aa3□□□□□ -1.93
VTC1YER072W SSP2Q08646 371 aa3□□□□□ -1.93
VTC1YER072W YOR352WQ08816 343 aa3□□□□□ -1.93
VTC1YER072W MDL2P33311 773 aa2.99□□□□□ -1.93
VTC1YER072W ECM2P38241 364 aaKnown RBP2.99□□□□□ -1.93
VTC1YER072W NMD3P38861 518 aaKnown RBP2.99□□□□□ -1.93
VTC1YER072W MEF2P39677 819 aa2.99□□□□□ -1.93
VTC1YER072W PNP1Q05788 311 aa2.99□□□□□ -1.93
VTC1YER072W ALE1Q08548 619 aa2.99□□□□□ -1.93
VTC1YER072W SSK22P25390 1331 aaPredicted RBP2.98□□□□□ -1.93
VTC1YER072W TY1A-LR4P0C2I8 440 aaKnown RBP2.98□□□□□ -1.93
VTC1YER072W TY1A-DR6P0CX70 440 aa2.98□□□□□ -1.93
VTC1YER072W TY1A-ER1P0CX71 440 aa2.98□□□□□ -1.93
VTC1YER072W TY1A-LR2P0CX72 440 aa2.98□□□□□ -1.93
VTC1YER072W TY1A-PLP0CX73 440 aa2.98□□□□□ -1.93
VTC1YER072W TY1A-JR1P0CX74 440 aa2.98□□□□□ -1.93
VTC1YER072W TY1A-LR3P0CX75 440 aa2.98□□□□□ -1.93
VTC1YER072W TY1A-ML2P0CX76 440 aa2.98□□□□□ -1.93
VTC1YER072W MSM1P22438 575 aa2.98□□□□□ -1.93
VTC1YER072W HCM1P25364 564 aa2.98□□□□□ -1.93
VTC1YER072W ARL1P38116 183 aaKnown RBP2.98□□□□□ -1.93
VTC1YER072W LAM1P38851 1228 aa2.98□□□□□ -1.93
VTC1YER072W YIL089WP40500 205 aa2.98□□□□□ -1.93
VTC1YER072W YGL082WP53155 381 aa2.98□□□□□ -1.93
VTC1YER072W PAP2P53632 584 aaKnown RBP2.98□□□□□ -1.93
VTC1YER072W TIM50Q02776 476 aa2.98□□□□□ -1.93
VTC1YER072W SGD1Q06132 899 aa2.98□□□□□ -1.93
VTC1YER072W TY1A-GR1Q12085 440 aa2.98□□□□□ -1.93
VTC1YER072W LSO1Q3E827 93 aa2.98□□□□□ -1.93
VTC1YER072W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.98□□□□□ -1.93
VTC1YER072W TY1A-OLQ92392 440 aaKnown RBP2.98□□□□□ -1.93
VTC1YER072W LYS2P07702 1392 aa2.98□□□□□ -1.93
VTC1YER072W PEA2P40091 420 aa2.97□□□□□ -1.93
VTC1YER072W UBP16Q02863 499 aa2.97□□□□□ -1.93
VTC1YER072W PDS5Q04264 1277 aa2.97□□□□□ -1.93
VTC1YER072W CAF20P12962 161 aaKnown RBP2.96□□□□□ -1.94
VTC1YER072W AIM21P40563 679 aa2.96□□□□□ -1.94
VTC1YER072W SNM1P40993 198 aa2.96□□□□□ -1.94
VTC1YER072W SYF1Q04048 859 aaPredicted RBP2.96□□□□□ -1.94
VTC1YER072W NSE3Q05541 303 aa2.96□□□□□ -1.94
VTC1YER072W YLR257WQ06146 321 aaKnown RBP2.96□□□□□ -1.94
VTC1YER072W HAT1Q12341 374 aa2.96□□□□□ -1.94
VTC1YER072W GSC2P40989 1895 aa2.96□□□□□ -1.94
VTC1YER072W FRD1P32614 470 aaKnown RBP2.95□□□□□ -1.94
VTC1YER072W CHS7P38843 316 aa2.95□□□□□ -1.94
VTC1YER072W YGR117CP53270 476 aa2.95□□□□□ -1.94
VTC1YER072W UBP3Q01477 912 aaKnown RBP RIP-Chip data2.95□□□□□ -1.94not detected
VTC1YER072W NTO1Q12311 748 aa2.95□□□□□ -1.94
VTC1YER072W VPS13Q07878 3144 aa2.94□□□□□ -1.94
VTC1YER072W SPS1P08458 490 aa2.94□□□□□ -1.94
VTC1YER072W PUF4P25339 888 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
VTC1YER072W SRO9P25567 434 aaKnown RBP2.94□□□□□ -1.94
VTC1YER072W PMI40P29952 429 aaKnown RBP2.94□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms