RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W TAT2P38967 592 aa3.39□□□□□ -1.87
VPS52YDR484W TDA5Q06417 326 aaKnown RBP3.39□□□□□ -1.87
VPS52YDR484W RSC58Q07979 502 aa3.39□□□□□ -1.87
VPS52YDR484W SNF5P18480 905 aa3.38□□□□□ -1.87
VPS52YDR484W TRM2P33753 639 aa3.38□□□□□ -1.87
VPS52YDR484W GEM1P39722 662 aa3.38□□□□□ -1.87
VPS52YDR484W THS1P04801 734 aaKnown RBP3.38□□□□□ -1.87
VPS52YDR484W RPL11AP0C0W9 174 aaKnown RBP3.38□□□□□ -1.87
VPS52YDR484W AIM26P32858 118 aa3.38□□□□□ -1.87
VPS52YDR484W MRP8P35719 219 aa3.38□□□□□ -1.87
VPS52YDR484W SPF1P39986 1215 aaKnown RBP3.38□□□□□ -1.87
VPS52YDR484W YJL049WP47048 450 aa3.38□□□□□ -1.87
VPS52YDR484W NNF1P47149 201 aa3.38□□□□□ -1.87
VPS52YDR484W RCL1Q08096 367 aaPredicted RBP3.38□□□□□ -1.87
VPS52YDR484W YOR352WQ08816 343 aa3.38□□□□□ -1.87
VPS52YDR484W ACM1Q08981 209 aa3.38□□□□□ -1.87
VPS52YDR484W YPL066WQ12194 479 aa3.38□□□□□ -1.87
VPS52YDR484W RPL11BQ3E757 174 aaPredicted RBP3.38□□□□□ -1.87
VPS52YDR484W GRX1P25373 110 aaKnown RBP3.37□□□□□ -1.87
VPS52YDR484W YKL069WP36088 180 aa3.37□□□□□ -1.87
VPS52YDR484W VBA5P36172 582 aa3.37□□□□□ -1.87
VPS52YDR484W PNT1P38969 423 aa3.37□□□□□ -1.87
VPS52YDR484W ENV11P53246 860 aa3.37□□□□□ -1.87
VPS52YDR484W ESC2Q06340 456 aa3.37□□□□□ -1.87
VPS52YDR484W SPS1P08458 490 aa3.36□□□□□ -1.87
VPS52YDR484W SCT1P32784 759 aa3.36□□□□□ -1.87
VPS52YDR484W MXR1P40029 184 aa3.36□□□□□ -1.87
VPS52YDR484W SIP5P40210 489 aaKnown RBP3.36□□□□□ -1.87
VPS52YDR484W SPT20P50875 604 aa3.36□□□□□ -1.87
VPS52YDR484W UGA2P38067 497 aa3.36□□□□□ -1.87
VPS52YDR484W PBY1P38254 753 aa3.36□□□□□ -1.87
VPS52YDR484W IRR1P40541 1150 aa3.36□□□□□ -1.87
VPS52YDR484W SEC26P41810 973 aaKnown RBP3.36□□□□□ -1.87
VPS52YDR484W MSE1P48525 536 aa3.36□□□□□ -1.87
VPS52YDR484W NAN1Q02931 896 aaKnown RBP3.36□□□□□ -1.87
VPS52YDR484W DBP2P24783 546 aaKnown RBP3.35□□□□□ -1.87
VPS52YDR484W SPO75Q07798 868 aa3.35□□□□□ -1.87
VPS52YDR484W SLA2P33338 968 aa3.34□□□□□ -1.87
VPS52YDR484W MBP1P39678 833 aa3.34□□□□□ -1.87
VPS52YDR484W RRT14P40470 206 aa3.34□□□□□ -1.87
VPS52YDR484W YFL054CP43549 646 aa3.34□□□□□ -1.87
VPS52YDR484W TPO2P53283 614 aa3.34□□□□□ -1.87
VPS52YDR484W ATG13Q06628 738 aa3.34□□□□□ -1.87
VPS52YDR484W PRP9P19736 530 aaKnown RBP3.34□□□□□ -1.88
VPS52YDR484W RFC5P38251 354 aa3.34□□□□□ -1.88
VPS52YDR484W SLI1P53304 468 aa3.34□□□□□ -1.88
VPS52YDR484W SRP1Q02821 542 aaKnown RBP3.34□□□□□ -1.88
VPS52YDR484W SVS1Q12254 260 aa3.34□□□□□ -1.88
VPS52YDR484W BI4P03879 638 aa3.33□□□□□ -1.88
VPS52YDR484W YBR184WP38299 523 aa3.33□□□□□ -1.88
VPS52YDR484W RSM24Q03976 319 aa3.33□□□□□ -1.88
VPS52YDR484W YLL058WQ12198 575 aa3.33□□□□□ -1.88
VPS52YDR484W OSH2Q12451 1283 aa3.33□□□□□ -1.88
VPS52YDR484W KIN2P13186 1147 aaKnown RBP3.32□□□□□ -1.88
VPS52YDR484W RAD4P14736 754 aa3.32□□□□□ -1.88
VPS52YDR484W STE5P32917 917 aa3.32□□□□□ -1.88
VPS52YDR484W ACE2P21192 770 aa3.32□□□□□ -1.88
VPS52YDR484W SAH1P39954 449 aaKnown RBP3.32□□□□□ -1.88
VPS52YDR484W GUS1P46655 708 aaKnown RBP RIP-Chip data3.32□□□□□ -1.88not detected
VPS52YDR484W TIM54P47045 478 aa3.32□□□□□ -1.88
VPS52YDR484W ERP6P53198 216 aa3.32□□□□□ -1.88
VPS52YDR484W SUN4P53616 420 aa3.32□□□□□ -1.88
VPS52YDR484W YDR132CQ03900 495 aa3.32□□□□□ -1.88
VPS52YDR484W DUS3Q06053 668 aaKnown RBP3.32□□□□□ -1.88
VPS52YDR484W YDR306CQ06640 478 aa3.32□□□□□ -1.88
VPS52YDR484W FMP25Q08023 583 aa3.32□□□□□ -1.88
VPS52YDR484W YOL098CQ12496 1037 aa3.32□□□□□ -1.88
VPS52YDR484W STI1P15705 589 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
VPS52YDR484W PPH3P32345 308 aa3.31□□□□□ -1.88
VPS52YDR484W CDC11P32458 415 aa3.31□□□□□ -1.88
VPS52YDR484W OCA5P38738 679 aa3.31□□□□□ -1.88
VPS52YDR484W MEF2P39677 819 aa3.31□□□□□ -1.88
VPS52YDR484W CTF4Q01454 927 aa3.31□□□□□ -1.88
VPS52YDR484W MAP1Q01662 387 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
VPS52YDR484W EAF1Q06337 982 aa3.31□□□□□ -1.88
VPS52YDR484W ADE8P04161 214 aa3.31□□□□□ -1.88
VPS52YDR484W APL1P27351 700 aa3.31□□□□□ -1.88
VPS52YDR484W RPL8BP29453 256 aaKnown RBP3.31□□□□□ -1.88
VPS52YDR484W AAR2P32357 355 aaPredicted RBP3.31□□□□□ -1.88
VPS52YDR484W LAM1P38851 1228 aa3.31□□□□□ -1.88
VPS52YDR484W PFD1P46988 109 aa3.31□□□□□ -1.88
VPS52YDR484W UTP8P53276 713 aaKnown RBP3.31□□□□□ -1.88
VPS52YDR484W HRQ1Q05549 1077 aa3.31□□□□□ -1.88
VPS52YDR484W SGD1Q06132 899 aa3.31□□□□□ -1.88
VPS52YDR484W HSP60P19882 572 aaKnown RBP3.3□□□□□ -1.88
VPS52YDR484W CDC12P32468 407 aaKnown RBP3.3□□□□□ -1.88
VPS52YDR484W SIT1P39980 628 aa3.3□□□□□ -1.88
VPS52YDR484W ALR2P43553 858 aa3.3□□□□□ -1.88
VPS52YDR484W MTC3P53077 123 aa3.3□□□□□ -1.88
VPS52YDR484W GCN5Q03330 439 aa3.3□□□□□ -1.88
VPS52YDR484W NSE3Q05541 303 aa3.3□□□□□ -1.88
VPS52YDR484W MDM38Q08179 573 aa3.3□□□□□ -1.88
VPS52YDR484W CDC53Q12018 815 aaKnown RBP3.3□□□□□ -1.88
VPS52YDR484W OSW2Q12202 724 aa3.3□□□□□ -1.88
VPS52YDR484W YOR131CQ12486 218 aa3.3□□□□□ -1.88
VPS52YDR484W HCM1P25364 564 aa3.29□□□□□ -1.88
VPS52YDR484W ARE1P25628 610 aa3.29□□□□□ -1.88
VPS52YDR484W SRP40P32583 406 aaPredicted RBP3.29□□□□□ -1.88
VPS52YDR484W YKL151CP36059 337 aa3.29□□□□□ -1.88
VPS52YDR484W HUL5P53119 910 aa3.29□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms