RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C YGR130CP53278 816 aa6.83□□□□□ -1.32
LSM6YDR378C YDL124WQ07551 312 aaKnown RBP6.83□□□□□ -1.32
LSM6YDR378C SNF5P18480 905 aa6.82□□□□□ -1.32
LSM6YDR378C PPH3P32345 308 aa6.82□□□□□ -1.32
LSM6YDR378C CCC2P38995 1004 aa6.82□□□□□ -1.32
LSM6YDR378C NUP82P40368 713 aa6.82□□□□□ -1.32
LSM6YDR378C OYE3P41816 400 aaPredicted RBP6.82□□□□□ -1.32
LSM6YDR378C CCT8P47079 568 aaKnown RBP6.82□□□□□ -1.32
LSM6YDR378C RCL1Q08096 367 aaPredicted RBP6.82□□□□□ -1.32
LSM6YDR378C ADE8P04161 214 aa6.81□□□□□ -1.32
LSM6YDR378C CAN1P04817 590 aa6.81□□□□□ -1.32
LSM6YDR378C PRO1P32264 428 aa6.81□□□□□ -1.32
LSM6YDR378C SLA2P33338 968 aa6.81□□□□□ -1.32
LSM6YDR378C SAH1P39954 449 aaKnown RBP6.81□□□□□ -1.32
LSM6YDR378C YFL054CP43549 646 aa6.81□□□□□ -1.32
LSM6YDR378C GUS1P46655 708 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
LSM6YDR378C RSC58Q07979 502 aa6.81□□□□□ -1.32
LSM6YDR378C PPM2Q08282 695 aa6.81□□□□□ -1.32
LSM6YDR378C PEX7P39108 375 aa6.8□□□□□ -1.32
LSM6YDR378C TAF8Q03750 510 aa6.8□□□□□ -1.32
LSM6YDR378C CYC7P00045 113 aa6.79□□□□□ -1.32
LSM6YDR378C HBS1P32769 611 aaKnown RBP6.79□□□□□ -1.32
LSM6YDR378C TIM23P32897 222 aa6.79□□□□□ -1.32
LSM6YDR378C PTC7P38797 343 aa6.79□□□□□ -1.32
LSM6YDR378C GTS1P40956 396 aa6.79□□□□□ -1.32
LSM6YDR378C YLR125WQ12138 136 aa6.79□□□□□ -1.32
LSM6YDR378C MET6P05694 767 aaKnown RBP6.78□□□□□ -1.32
LSM6YDR378C PHO8P11491 566 aa6.78□□□□□ -1.32
LSM6YDR378C ADP1P25371 1049 aa6.78□□□□□ -1.32
LSM6YDR378C AIM26P32858 118 aa6.78□□□□□ -1.32
LSM6YDR378C RRP14P36080 434 aaKnown RBP6.78□□□□□ -1.32
LSM6YDR378C HBN1Q96VH4 193 aa6.78□□□□□ -1.32
LSM6YDR378C YRO2P38079 344 aa6.77□□□□□ -1.33
LSM6YDR378C YBR284WP38150 797 aa6.77□□□□□ -1.33
LSM6YDR378C LSB3P43603 459 aaKnown RBP6.77□□□□□ -1.33
LSM6YDR378C ALG12P53730 551 aa6.77□□□□□ -1.33
LSM6YDR378C NPL3Q01560 414 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
LSM6YDR378C SSY1Q03770 852 aa6.77□□□□□ -1.33
LSM6YDR378C MED7Q08278 222 aa6.77□□□□□ -1.33
LSM6YDR378C BI4P03879 638 aa6.76□□□□□ -1.33
LSM6YDR378C CDC12P32468 407 aaKnown RBP6.76□□□□□ -1.33
LSM6YDR378C DOM34P33309 386 aa6.76□□□□□ -1.33
LSM6YDR378C BRN1P38170 754 aa6.76□□□□□ -1.33
LSM6YDR378C SIT1P39980 628 aa6.76□□□□□ -1.33
LSM6YDR378C HRQ1Q05549 1077 aa6.76□□□□□ -1.33
LSM6YDR378C YLL058WQ12198 575 aa6.76□□□□□ -1.33
LSM6YDR378C SPS1P08458 490 aa6.75□□□□□ -1.33
LSM6YDR378C GCD1P09032 578 aaPredicted RBP6.75□□□□□ -1.33
LSM6YDR378C ERR1P0CX10 437 aa6.75□□□□□ -1.33
LSM6YDR378C ERR2P0CX11 437 aa6.75□□□□□ -1.33
LSM6YDR378C THI4P32318 326 aa6.75□□□□□ -1.33
LSM6YDR378C RRT14P40470 206 aa6.75□□□□□ -1.33
LSM6YDR378C FOL2P51601 243 aaKnown RBP6.75□□□□□ -1.33
LSM6YDR378C MTC5Q03897 1148 aa6.75□□□□□ -1.33
LSM6YDR378C SVS1Q12254 260 aa6.75□□□□□ -1.33
LSM6YDR378C YPR071WQ12346 211 aa6.75□□□□□ -1.33
LSM6YDR378C TRP3P00937 484 aa6.74□□□□□ -1.33
LSM6YDR378C TOM70P07213 617 aaKnown RBP6.74□□□□□ -1.33
LSM6YDR378C YKL151CP36059 337 aa6.74□□□□□ -1.33
LSM6YDR378C RTA1P53047 317 aa6.74□□□□□ -1.33
LSM6YDR378C LCD1Q04377 747 aa6.74□□□□□ -1.33
LSM6YDR378C ATG13Q06628 738 aa6.74□□□□□ -1.33
LSM6YDR378C BET3P36149 193 aa6.73□□□□□ -1.33
LSM6YDR378C RFC5P38251 354 aa6.73□□□□□ -1.33
LSM6YDR378C SEC26P41810 973 aaKnown RBP6.73□□□□□ -1.33
LSM6YDR378C POB3Q04636 552 aaKnown RBP6.73□□□□□ -1.33
LSM6YDR378C MDM38Q08179 573 aa6.73□□□□□ -1.33
LSM6YDR378C ACE2P21192 770 aa6.72□□□□□ -1.33
LSM6YDR378C PET10P36139 283 aa6.72□□□□□ -1.33
LSM6YDR378C DOS2P54858 310 aa6.72□□□□□ -1.33
LSM6YDR378C TOP3P13099 656 aa6.71□□□□□ -1.34
LSM6YDR378C MSD1P15179 658 aaKnown RBP6.71□□□□□ -1.34
LSM6YDR378C TOS1P38288 455 aa6.71□□□□□ -1.34
LSM6YDR378C UBP6P43593 499 aaKnown RBP6.71□□□□□ -1.34
LSM6YDR378C CCM1P48237 864 aaPredicted RBP6.71□□□□□ -1.34
LSM6YDR378C HSV2P50079 448 aaPredicted RBP6.71□□□□□ -1.34
LSM6YDR378C SDH1Q00711 640 aa6.71□□□□□ -1.34
LSM6YDR378C MAP1Q01662 387 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
LSM6YDR378C OSW2Q12202 724 aa6.71□□□□□ -1.34
LSM6YDR378C REC104P33323 182 aa6.7□□□□□ -1.34
LSM6YDR378C YKR073CP36153 106 aa6.7□□□□□ -1.34
LSM6YDR378C GYP7P48365 746 aa6.7□□□□□ -1.34
LSM6YDR378C MTC3P53077 123 aa6.7□□□□□ -1.34
LSM6YDR378C SRT1Q03175 343 aa6.7□□□□□ -1.34
LSM6YDR378C KIN2P13186 1147 aaKnown RBP6.69□□□□□ -1.34
LSM6YDR378C SPC42P36094 363 aa6.69□□□□□ -1.34
LSM6YDR378C YKR078WP36158 585 aaKnown RBP6.69□□□□□ -1.34
LSM6YDR378C FPR3P38911 411 aaKnown RBP6.69□□□□□ -1.34
LSM6YDR378C ENV11P53246 860 aa6.69□□□□□ -1.34
LSM6YDR378C RSM24Q03976 319 aa6.69□□□□□ -1.34
LSM6YDR378C NPP1P25353 742 aa6.68□□□□□ -1.34
LSM6YDR378C APL1P27351 700 aa6.68□□□□□ -1.34
LSM6YDR378C FUN30P31380 1131 aa6.68□□□□□ -1.34
LSM6YDR378C GDH3P39708 457 aa6.68□□□□□ -1.34
LSM6YDR378C YER158CP40095 573 aa6.68□□□□□ -1.34
LSM6YDR378C TOK1P40310 691 aa6.68□□□□□ -1.34
LSM6YDR378C ALO1P54783 526 aaKnown RBP6.68□□□□□ -1.34
LSM6YDR378C YPR196WQ06595 470 aa6.68□□□□□ -1.34
LSM6YDR378C CDC48P25694 835 aaKnown RBP6.67□□□□□ -1.34
LSM6YDR378C GIC1P38785 314 aa6.67□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 129.1 ms