RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C NFS1P25374 497 aa5.33□□□□□ -1.56
SHU2YDR078C YCR015CP25616 317 aa5.33□□□□□ -1.56
SHU2YDR078C GRX4P32642 244 aa5.33□□□□□ -1.56
SHU2YDR078C SCT1P32784 759 aa5.33□□□□□ -1.56
SHU2YDR078C POL12P38121 705 aaPredicted RBP5.33□□□□□ -1.56
SHU2YDR078C GUS1P46655 708 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
SHU2YDR078C TPO2P53283 614 aa5.33□□□□□ -1.56
SHU2YDR078C ELA1P53861 379 aaPredicted RBP5.33□□□□□ -1.56
SHU2YDR078C DOT1Q04089 582 aaKnown RBP5.33□□□□□ -1.56
SHU2YDR078C SPP382Q06411 708 aaPredicted RBP5.33□□□□□ -1.56
SHU2YDR078C NTG2Q08214 380 aa5.33□□□□□ -1.56
SHU2YDR078C HBN1Q96VH4 193 aa5.33□□□□□ -1.56
SHU2YDR078C CDC11P32458 415 aa5.32□□□□□ -1.56
SHU2YDR078C PNT1P38969 423 aa5.32□□□□□ -1.56
SHU2YDR078C KIP3P53086 805 aaKnown RBP5.32□□□□□ -1.56
SHU2YDR078C DNM1P54861 757 aa5.32□□□□□ -1.56
SHU2YDR078C YER152CP10356 443 aa5.31□□□□□ -1.56
SHU2YDR078C SRM1P21827 482 aa5.31□□□□□ -1.56
SHU2YDR078C RET1P22276 1149 aaKnown RBP5.31□□□□□ -1.56
SHU2YDR078C KIP1P28742 1111 aa5.31□□□□□ -1.56
SHU2YDR078C NIT1P40447 199 aa5.31□□□□□ -1.56
SHU2YDR078C MAL11P53048 616 aa5.31□□□□□ -1.56
SHU2YDR078C UGO1Q03327 502 aa5.31□□□□□ -1.56
SHU2YDR078C YDR306CQ06640 478 aa5.31□□□□□ -1.56
SHU2YDR078C SPO21Q12411 609 aa5.31□□□□□ -1.56
SHU2YDR078C SSB1P11484 613 aaKnown RBP5.3□□□□□ -1.56
SHU2YDR078C AAR2P32357 355 aaPredicted RBP5.3□□□□□ -1.56
SHU2YDR078C YKL222CP35995 705 aa5.3□□□□□ -1.56
SHU2YDR078C NNK1P36003 928 aa5.3□□□□□ -1.56
SHU2YDR078C UBP12P39538 1254 aa5.3□□□□□ -1.56
SHU2YDR078C GDH3P39708 457 aa5.3□□□□□ -1.56
SHU2YDR078C SIT1P39980 628 aa5.3□□□□□ -1.56
SHU2YDR078C SSB2P40150 613 aaKnown RBP5.3□□□□□ -1.56
SHU2YDR078C ECL1P48235 211 aa5.3□□□□□ -1.56
SHU2YDR078C HSV2P50079 448 aaPredicted RBP5.3□□□□□ -1.56
SHU2YDR078C YLR257WQ06146 321 aaKnown RBP5.3□□□□□ -1.56
SHU2YDR078C GIC2Q06648 383 aa5.3□□□□□ -1.56
SHU2YDR078C DFG16Q99234 619 aa5.3□□□□□ -1.56
SHU2YDR078C TOM70P07213 617 aaKnown RBP5.29□□□□□ -1.56
SHU2YDR078C RPL11AP0C0W9 174 aaKnown RBP5.29□□□□□ -1.56
SHU2YDR078C TOP3P13099 656 aa5.29□□□□□ -1.56
SHU2YDR078C DBP2P24783 546 aaKnown RBP5.29□□□□□ -1.56
SHU2YDR078C SMY2P32909 740 aaKnown RBP5.29□□□□□ -1.56
SHU2YDR078C DUS3Q06053 668 aaKnown RBP5.29□□□□□ -1.56
SHU2YDR078C HRK1Q08732 759 aaKnown RBP5.29□□□□□ -1.56
SHU2YDR078C RPL11BQ3E757 174 aaPredicted RBP5.29□□□□□ -1.56
SHU2YDR078C MSD1P15179 658 aaKnown RBP5.28□□□□□ -1.56
SHU2YDR078C RPL8AP17076 256 aaKnown RBP5.28□□□□□ -1.56
SHU2YDR078C YBR284WP38150 797 aa5.28□□□□□ -1.56
SHU2YDR078C CRP1P38845 465 aaKnown RBP5.28□□□□□ -1.56
SHU2YDR078C GPB2P39717 880 aa5.28□□□□□ -1.56
SHU2YDR078C GEM1P39722 662 aa5.28□□□□□ -1.56
SHU2YDR078C RPN3P40016 523 aaKnown RBP5.28□□□□□ -1.56
SHU2YDR078C UBP6P43593 499 aaKnown RBP5.28□□□□□ -1.56
SHU2YDR078C ADR1P07248 1323 aa5.27□□□□□ -1.57
SHU2YDR078C PPH3P32345 308 aa5.27□□□□□ -1.57
SHU2YDR078C SFP1P32432 683 aa5.27□□□□□ -1.57
SHU2YDR078C DOM34P33309 386 aa5.27□□□□□ -1.57
SHU2YDR078C PEX6P33760 1030 aa5.27□□□□□ -1.57
SHU2YDR078C TOM20P35180 183 aa5.27□□□□□ -1.57
SHU2YDR078C PET10P36139 283 aa5.27□□□□□ -1.57
SHU2YDR078C GPT2P36148 743 aa5.27□□□□□ -1.57
SHU2YDR078C YJL045WP47052 634 aa5.27□□□□□ -1.57
SHU2YDR078C TFB2Q02939 513 aa5.27□□□□□ -1.57
SHU2YDR078C ESC8Q08119 714 aa5.27□□□□□ -1.57
SHU2YDR078C ACM1Q08981 209 aa5.27□□□□□ -1.57
SHU2YDR078C GAS1P22146 559 aaKnown RBP5.26□□□□□ -1.57
SHU2YDR078C CDC12P32468 407 aaKnown RBP5.26□□□□□ -1.57
SHU2YDR078C MXR1P40029 184 aa5.26□□□□□ -1.57
SHU2YDR078C ZDS1P50111 915 aaKnown RBP5.26□□□□□ -1.57
SHU2YDR078C SRP1Q02821 542 aaKnown RBP5.26□□□□□ -1.57
SHU2YDR078C MDM12Q92328 271 aa5.26□□□□□ -1.57
SHU2YDR078C MEF1P25039 761 aa5.25□□□□□ -1.57
SHU2YDR078C SLA2P33338 968 aa5.25□□□□□ -1.57
SHU2YDR078C NMD3P38861 518 aaKnown RBP5.25□□□□□ -1.57
SHU2YDR078C YEN1P40028 759 aa5.25□□□□□ -1.57
SHU2YDR078C TAF1P46677 1066 aa5.25□□□□□ -1.57
SHU2YDR078C ALT1P52893 592 aa5.25□□□□□ -1.57
SHU2YDR078C YNR029CP53729 429 aaKnown RBP5.25□□□□□ -1.57
SHU2YDR078C LCD1Q04377 747 aa5.25□□□□□ -1.57
SHU2YDR078C YPR071WQ12346 211 aa5.25□□□□□ -1.57
SHU2YDR078C ADE8P04161 214 aa5.24□□□□□ -1.57
SHU2YDR078C AFR1P33304 620 aa5.24□□□□□ -1.57
SHU2YDR078C ALG2P43636 503 aa5.24□□□□□ -1.57
SHU2YDR078C PRP43P53131 767 aaKnown RBP5.24□□□□□ -1.57
SHU2YDR078C HOS3Q02959 697 aaKnown RBP5.24□□□□□ -1.57
SHU2YDR078C BUL2Q03758 920 aaKnown RBP5.24□□□□□ -1.57
SHU2YDR078C TPP1Q03796 238 aa5.24□□□□□ -1.57
SHU2YDR078C PUS7Q08647 676 aaKnown RBP5.24□□□□□ -1.57
SHU2YDR078C GSY1P23337 708 aa5.23□□□□□ -1.57
SHU2YDR078C PRO1P32264 428 aa5.23□□□□□ -1.57
SHU2YDR078C YSC84P32793 468 aa5.23□□□□□ -1.57
SHU2YDR078C WHI3P34761 661 aaKnown RBP5.23□□□□□ -1.57
SHU2YDR078C YRO2P38079 344 aa5.23□□□□□ -1.57
SHU2YDR078C TNA1P53322 534 aa5.23□□□□□ -1.57
SHU2YDR078C HRQ1Q05549 1077 aa5.23□□□□□ -1.57
SHU2YDR078C ATG13Q06628 738 aa5.23□□□□□ -1.57
SHU2YDR078C CDA2Q06703 312 aa5.23□□□□□ -1.57
SHU2YDR078C THS1P04801 734 aaKnown RBP5.22□□□□□ -1.57
SHU2YDR078C RPS4AP0CX35 261 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 74.9 ms