RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeastyeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN4YDL020C COQ2P32378 372 aa5.4□□□□□ -1.55
RPN4YDL020C CDC11P32458 415 aa5.4□□□□□ -1.55
RPN4YDL020C YHL012WP38709 493 aa5.4□□□□□ -1.55
RPN4YDL020C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.4□□□□□ -1.55not detected
RPN4YDL020C RCL1Q08096 367 aaPredicted RBP5.4□□□□□ -1.55
RPN4YDL020C YOR059CQ08448 450 aaKnown RBP5.4□□□□□ -1.55
RPN4YDL020C MCA1Q08601 432 aa5.4□□□□□ -1.55
RPN4YDL020C HBN1Q96VH4 193 aa5.4□□□□□ -1.55
RPN4YDL020C THI4P32318 326 aa5.39□□□□□ -1.55
RPN4YDL020C PPH3P32345 308 aa5.39□□□□□ -1.55
RPN4YDL020C SLA2P33338 968 aa5.39□□□□□ -1.55
RPN4YDL020C PGM1P33401 570 aaKnown RBP5.39□□□□□ -1.55
RPN4YDL020C BET3P36149 193 aa5.39□□□□□ -1.55
RPN4YDL020C UGA2P38067 497 aa5.39□□□□□ -1.55
RPN4YDL020C BAP2P38084 609 aa5.39□□□□□ -1.55
RPN4YDL020C SAM35P14693 329 aa5.38□□□□□ -1.55
RPN4YDL020C PRO1P32264 428 aa5.38□□□□□ -1.55
RPN4YDL020C YBR284WP38150 797 aa5.38□□□□□ -1.55
RPN4YDL020C CCZ1P38273 704 aa5.38□□□□□ -1.55
RPN4YDL020C RCM1P53972 490 aa5.38□□□□□ -1.55
RPN4YDL020C SRP1Q02821 542 aaKnown RBP5.38□□□□□ -1.55
RPN4YDL020C YPL034WQ03083 165 aa5.38□□□□□ -1.55
RPN4YDL020C SRO9P25567 434 aaKnown RBP5.38□□□□□ -1.55
RPN4YDL020C CDC12P32468 407 aaKnown RBP5.38□□□□□ -1.55
RPN4YDL020C SCT1P32784 759 aa5.38□□□□□ -1.55
RPN4YDL020C FPR3P38911 411 aaKnown RBP5.38□□□□□ -1.55
RPN4YDL020C PIK1P39104 1066 aa5.38□□□□□ -1.55
RPN4YDL020C SIT1P39980 628 aa5.38□□□□□ -1.55
RPN4YDL020C HRQ1Q05549 1077 aa5.38□□□□□ -1.55
RPN4YDL020C TOP3P13099 656 aa5.37□□□□□ -1.55
RPN4YDL020C CHS2P14180 963 aa5.37□□□□□ -1.55
RPN4YDL020C MDL2P33311 773 aa5.37□□□□□ -1.55
RPN4YDL020C SAH1P39954 449 aaKnown RBP5.37□□□□□ -1.55
RPN4YDL020C POB3Q04636 552 aaKnown RBP5.37□□□□□ -1.55
RPN4YDL020C ADE8P04161 214 aa5.36□□□□□ -1.55
RPN4YDL020C THS1P04801 734 aaKnown RBP5.36□□□□□ -1.55
RPN4YDL020C TOM70P07213 617 aaKnown RBP5.36□□□□□ -1.55
RPN4YDL020C MSB1P21339 1137 aaKnown RBP5.36□□□□□ -1.55
RPN4YDL020C YKL151CP36059 337 aa5.36□□□□□ -1.55
RPN4YDL020C YRO2P38079 344 aa5.36□□□□□ -1.55
RPN4YDL020C MNN1P39106 762 aa5.36□□□□□ -1.55
RPN4YDL020C OYE3P41816 400 aaPredicted RBP5.36□□□□□ -1.55
RPN4YDL020C YLR122CQ12312 125 aa5.36□□□□□ -1.55
RPN4YDL020C YPR071WQ12346 211 aa5.36□□□□□ -1.55
RPN4YDL020C BI4P03879 638 aa5.35□□□□□ -1.55
RPN4YDL020C MSD1P15179 658 aaKnown RBP5.35□□□□□ -1.55
RPN4YDL020C DOM34P33309 386 aa5.35□□□□□ -1.55
RPN4YDL020C RSC58Q07979 502 aa5.35□□□□□ -1.55
RPN4YDL020C NBA1Q08229 501 aaKnown RBP5.35□□□□□ -1.55
RPN4YDL020C RSB1Q08417 382 aa5.35□□□□□ -1.55
RPN4YDL020C TRE1Q08919 783 aa5.35□□□□□ -1.55
RPN4YDL020C KAE1P36132 386 aa5.34□□□□□ -1.55
RPN4YDL020C PET10P36139 283 aa5.34□□□□□ -1.55
RPN4YDL020C PEX7P39108 375 aa5.34□□□□□ -1.55
RPN4YDL020C UBP6P43593 499 aaKnown RBP5.34□□□□□ -1.55
RPN4YDL020C HSV2P50079 448 aaPredicted RBP5.34□□□□□ -1.55
RPN4YDL020C MSH2P25847 964 aa5.33□□□□□ -1.56
RPN4YDL020C GDH3P39708 457 aa5.33□□□□□ -1.56
RPN4YDL020C CCT8P47079 568 aaKnown RBP5.33□□□□□ -1.56
RPN4YDL020C LCD1Q04377 747 aa5.33□□□□□ -1.56
RPN4YDL020C YLL058WQ12198 575 aa5.33□□□□□ -1.56
RPN4YDL020C NSI1Q12457 570 aa5.33□□□□□ -1.56
RPN4YDL020C AFR1P33304 620 aa5.33□□□□□ -1.56
RPN4YDL020C YGR130CP53278 816 aa5.33□□□□□ -1.56
RPN4YDL020C BUL2Q03758 920 aaKnown RBP5.33□□□□□ -1.56
RPN4YDL020C MDM38Q08179 573 aa5.33□□□□□ -1.56
RPN4YDL020C NPP1P25353 742 aa5.32□□□□□ -1.56
RPN4YDL020C AIM26P32858 118 aa5.32□□□□□ -1.56
RPN4YDL020C ERT1P38140 529 aa5.32□□□□□ -1.56
RPN4YDL020C PTC7P38797 343 aa5.32□□□□□ -1.56
RPN4YDL020C RRT14P40470 206 aa5.32□□□□□ -1.56
RPN4YDL020C GTS1P40956 396 aa5.32□□□□□ -1.56
RPN4YDL020C MTC3P53077 123 aa5.32□□□□□ -1.56
RPN4YDL020C UTP14Q04500 899 aaKnown RBP5.32□□□□□ -1.56
RPN4YDL020C ATG13Q06628 738 aa5.32□□□□□ -1.56
RPN4YDL020C ACE2P21192 770 aa5.31□□□□□ -1.56
RPN4YDL020C TOK1P40310 691 aa5.31□□□□□ -1.56
RPN4YDL020C MAL11P53048 616 aa5.31□□□□□ -1.56
RPN4YDL020C GCD1P09032 578 aaPredicted RBP5.3□□□□□ -1.56
RPN4YDL020C SSY1Q03770 852 aa5.3□□□□□ -1.56
RPN4YDL020C NTG2Q08214 380 aa5.3□□□□□ -1.56
RPN4YDL020C SVS1Q12254 260 aa5.3□□□□□ -1.56
RPN4YDL020C YGR161W-CQ3E744 92 aa5.3□□□□□ -1.56
RPN4YDL020C CYC7P00045 113 aa5.29□□□□□ -1.56
RPN4YDL020C REC104P33323 182 aa5.29□□□□□ -1.56
RPN4YDL020C TSL1P38427 1098 aaKnown RBP5.29□□□□□ -1.56
RPN4YDL020C GIC1P38785 314 aa5.29□□□□□ -1.56
RPN4YDL020C ALG2P43636 503 aa5.29□□□□□ -1.56
RPN4YDL020C CCM1P48237 864 aaPredicted RBP5.29□□□□□ -1.56
RPN4YDL020C GYP7P48365 746 aa5.29□□□□□ -1.56
RPN4YDL020C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
RPN4YDL020C SRT1Q03175 343 aa5.29□□□□□ -1.56
RPN4YDL020C UGO1Q03327 502 aa5.29□□□□□ -1.56
RPN4YDL020C SPS1P08458 490 aa5.29□□□□□ -1.56
RPN4YDL020C ADP1P25371 1049 aa5.29□□□□□ -1.56
RPN4YDL020C YKR078WP36158 585 aaKnown RBP5.29□□□□□ -1.56
RPN4YDL020C NPP2P39997 493 aa5.29□□□□□ -1.56
RPN4YDL020C YJR142WP47173 342 aa5.29□□□□□ -1.56
RPN4YDL020C SDH1Q00711 640 aa5.29□□□□□ -1.56
RPN4YDL020C NOP14Q99207 810 aaKnown RBP5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 60.4 ms