RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	PEX7	P39108	375 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	MBP1	P39678	833 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	RSP5	P39940	809 aa	Known RBP	4.23	□□□□□ -1.73
SRD1	YCR018C	NUP82	P40368	713 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	MPH1	P40562	993 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	MSH4	P40965	878 aa	Predicted RBP	4.23	□□□□□ -1.73
SRD1	YCR018C	BUD6	P41697	788 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	ALR2	P43553	858 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	TPO2	P53283	614 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	MRPL22	P53881	309 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	EAR1	Q03212	550 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	YLR257W	Q06146	321 aa	Known RBP	4.23	□□□□□ -1.73
SRD1	YCR018C	FMP25	Q08023	583 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	HRK1	Q08732	759 aa	Known RBP	4.23	□□□□□ -1.73
SRD1	YCR018C	GNT1	Q12096	491 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	SPO21	Q12411	609 aa		4.23	□□□□□ -1.73
SRD1	YCR018C	CIT1	P00890	479 aa		4.22	□□□□□ -1.73
SRD1	YCR018C	MET6	P05694	767 aa	Known RBP	4.22	□□□□□ -1.73
SRD1	YCR018C	KIP1	P28742	1111 aa		4.22	□□□□□ -1.73
SRD1	YCR018C	PRO1	P32264	428 aa		4.22	□□□□□ -1.73
SRD1	YCR018C	RRP14	P36080	434 aa	Known RBP	4.22	□□□□□ -1.73
SRD1	YCR018C	ALG12	P53730	551 aa		4.22	□□□□□ -1.73
SRD1	YCR018C	YPL066W	Q12194	479 aa		4.22	□□□□□ -1.73
SRD1	YCR018C	YDL177C	Q12257	170 aa		4.22	□□□□□ -1.73
SRD1	YCR018C	PHO8	P11491	566 aa		4.21	□□□□□ -1.74
SRD1	YCR018C	SPC42	P36094	363 aa		4.21	□□□□□ -1.74
SRD1	YCR018C	ABZ1	P37254	787 aa	Predicted RBP	4.21	□□□□□ -1.74
SRD1	YCR018C	YHR020W	P38708	688 aa	Known RBP	4.21	□□□□□ -1.74
SRD1	YCR018C	ALT1	P52893	592 aa		4.21	□□□□□ -1.74
SRD1	YCR018C	UTP8	P53276	713 aa	Known RBP	4.21	□□□□□ -1.74
SRD1	YCR018C	DOS2	P54858	310 aa		4.21	□□□□□ -1.74
SRD1	YCR018C	UBX5	Q06682	500 aa		4.21	□□□□□ -1.74
SRD1	YCR018C	YDL124W	Q07551	312 aa	Known RBP	4.21	□□□□□ -1.74
SRD1	YCR018C	YLR125W	Q12138	136 aa		4.21	□□□□□ -1.74
SRD1	YCR018C	YVC1	Q12324	675 aa		4.21	□□□□□ -1.74
SRD1	YCR018C	YER152C	P10356	443 aa		4.2	□□□□□ -1.74
SRD1	YCR018C	AAR2	P32357	355 aa	Predicted RBP	4.2	□□□□□ -1.74
SRD1	YCR018C	CDC11	P32458	415 aa		4.2	□□□□□ -1.74
SRD1	YCR018C	TIM23	P32897	222 aa		4.2	□□□□□ -1.74
SRD1	YCR018C	TOD6	P34219	525 aa		4.2	□□□□□ -1.74
SRD1	YCR018C	NMD3	P38861	518 aa	Known RBP	4.2	□□□□□ -1.74
SRD1	YCR018C	FPR3	P38911	411 aa	Known RBP	4.2	□□□□□ -1.74
SRD1	YCR018C	GPB2	P39717	880 aa		4.2	□□□□□ -1.74
SRD1	YCR018C	PFD1	P46988	109 aa		4.2	□□□□□ -1.74
SRD1	YCR018C	TPP1	Q03796	238 aa		4.2	□□□□□ -1.74
SRD1	YCR018C	YDR306C	Q06640	478 aa		4.2	□□□□□ -1.74
SRD1	YCR018C	CAN1	P04817	590 aa		4.19	□□□□□ -1.74
SRD1	YCR018C	THI4	P32318	326 aa		4.19	□□□□□ -1.74
SRD1	YCR018C	CCC2	P38995	1004 aa		4.19	□□□□□ -1.74
SRD1	YCR018C	YJL045W	P47052	634 aa		4.19	□□□□□ -1.74
SRD1	YCR018C	PPM2	Q08282	695 aa		4.19	□□□□□ -1.74
SRD1	YCR018C	PUS7	Q08647	676 aa	Known RBP	4.19	□□□□□ -1.74
SRD1	YCR018C	SOD2	P00447	233 aa		4.18	□□□□□ -1.74
SRD1	YCR018C	RPL11A	P0C0W9	174 aa	Known RBP	4.18	□□□□□ -1.74
SRD1	YCR018C	PPH3	P32345	308 aa		4.18	□□□□□ -1.74
SRD1	YCR018C	YPT53	P36019	220 aa		4.18	□□□□□ -1.74
SRD1	YCR018C	PTC7	P38797	343 aa		4.18	□□□□□ -1.74
SRD1	YCR018C	SIP5	P40210	489 aa	Known RBP	4.18	□□□□□ -1.74
SRD1	YCR018C	TNA1	P53322	534 aa		4.18	□□□□□ -1.74
SRD1	YCR018C	SRP1	Q02821	542 aa	Known RBP	4.18	□□□□□ -1.74
SRD1	YCR018C	HOS3	Q02959	697 aa	Known RBP	4.18	□□□□□ -1.74
SRD1	YCR018C	POB3	Q04636	552 aa	Known RBP	4.18	□□□□□ -1.74
SRD1	YCR018C	DUS3	Q06053	668 aa	Known RBP	4.18	□□□□□ -1.74
SRD1	YCR018C	RPL11B	Q3E757	174 aa	Predicted RBP	4.18	□□□□□ -1.74
SRD1	YCR018C	COQ4	O13525	335 aa		4.17	□□□□□ -1.74
SRD1	YCR018C	PNT1	P38969	423 aa		4.17	□□□□□ -1.74
SRD1	YCR018C	RPN3	P40016	523 aa	Known RBP	4.17	□□□□□ -1.74
SRD1	YCR018C	MXR1	P40029	184 aa		4.17	□□□□□ -1.74
SRD1	YCR018C	YPL277C	Q08989	487 aa		4.17	□□□□□ -1.74
SRD1	YCR018C	ADE8	P04161	214 aa		4.16	□□□□□ -1.74
SRD1	YCR018C	THS1	P04801	734 aa	Known RBP	4.16	□□□□□ -1.74
SRD1	YCR018C	TOM70	P07213	617 aa	Known RBP	4.16	□□□□□ -1.74
SRD1	YCR018C	ERR1	P0CX10	437 aa		4.16	□□□□□ -1.74
SRD1	YCR018C	ERR2	P0CX11	437 aa		4.16	□□□□□ -1.74
SRD1	YCR018C	YSC84	P32793	468 aa		4.16	□□□□□ -1.74
SRD1	YCR018C	ETP1	P38748	585 aa	Known RBP	4.16	□□□□□ -1.74
SRD1	YCR018C	GEM1	P39722	662 aa		4.16	□□□□□ -1.74
SRD1	YCR018C	TAF8	Q03750	510 aa		4.16	□□□□□ -1.74
SRD1	YCR018C	UTP14	Q04500	899 aa	Known RBP	4.16	□□□□□ -1.74
SRD1	YCR018C	ACM1	Q08981	209 aa		4.16	□□□□□ -1.74
SRD1	YCR018C	TUB2	P02557	457 aa	Known RBP	4.15	□□□□□ -1.75
SRD1	YCR018C	DOM34	P33309	386 aa		4.15	□□□□□ -1.75
SRD1	YCR018C	SHM2	P37291	469 aa	Known RBP	4.15	□□□□□ -1.75
SRD1	YCR018C	YBR284W	P38150	797 aa		4.15	□□□□□ -1.75
SRD1	YCR018C	CCZ1	P38273	704 aa		4.15	□□□□□ -1.75
SRD1	YCR018C	YHL012W	P38709	493 aa		4.15	□□□□□ -1.75
SRD1	YCR018C	MNN1	P39106	762 aa		4.15	□□□□□ -1.75
SRD1	YCR018C	SAH1	P39954	449 aa	Known RBP	4.15	□□□□□ -1.75
SRD1	YCR018C	GTS1	P40956	396 aa		4.15	□□□□□ -1.75
SRD1	YCR018C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.15	□□□□□ -1.75	not detected
SRD1	YCR018C	CLU1	Q03690	1277 aa	Known RBP	4.15	□□□□□ -1.75
SRD1	YCR018C	NBA1	Q08229	501 aa	Known RBP	4.15	□□□□□ -1.75
SRD1	YCR018C	PNS1	Q12412	539 aa		4.15	□□□□□ -1.75
SRD1	YCR018C	RPS13	P05756	151 aa	Known RBP	4.14	□□□□□ -1.75
SRD1	YCR018C	DBP2	P24783	546 aa	Known RBP	4.14	□□□□□ -1.75
SRD1	YCR018C	HBS1	P32769	611 aa	Known RBP	4.14	□□□□□ -1.75
SRD1	YCR018C	UGA2	P38067	497 aa		4.14	□□□□□ -1.75
SRD1	YCR018C	YRO2	P38079	344 aa		4.14	□□□□□ -1.75
SRD1	YCR018C	HSV2	P50079	448 aa	Predicted RBP	4.14	□□□□□ -1.75
SRD1	YCR018C	RTA1	P53047	317 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms