RNA–Protein interactions for RNA: YCL051W

LRE1, Transcript of Protein involved in control of cell wall structure and stress response, yeast

Gene LRE1, Length 1,752 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LRE1	YCL051W	STB4	P50104	949 aa		2.64	□□□□□ -1.99
LRE1	YCL051W	RAT1	Q02792	1006 aa	Known RBP	2.64	□□□□□ -1.99
LRE1	YCL051W	YPL109C	Q02981	657 aa		2.64	□□□□□ -1.99
LRE1	YCL051W	ESC1	Q03661	1658 aa	Known RBP	2.64	□□□□□ -1.99
LRE1	YCL051W	ACE2	P21192	770 aa		2.64	□□□□□ -1.99
LRE1	YCL051W	EFT1	P32324	842 aa	Known RBP	2.64	□□□□□ -1.99
LRE1	YCL051W	EBP2	P36049	427 aa	Known RBP	2.64	□□□□□ -1.99
LRE1	YCL051W	POA1	P38218	177 aa		2.64	□□□□□ -1.99
LRE1	YCL051W	SKI3	P17883	1432 aa	Known RBP	2.64	□□□□□ -1.99
LRE1	YCL051W	TAF2	P23255	1407 aa		2.64	□□□□□ -1.99
LRE1	YCL051W	VPS35	P34110	944 aa		2.63	□□□□□ -1.99
LRE1	YCL051W	ERP5	P38819	212 aa		2.63	□□□□□ -1.99
LRE1	YCL051W	YER158C	P40095	573 aa		2.63	□□□□□ -1.99
LRE1	YCL051W	OMS1	Q06668	471 aa		2.63	□□□□□ -1.99
LRE1	YCL051W	ENB1	Q08299	606 aa		2.63	□□□□□ -1.99
LRE1	YCL051W	SIN3	P22579	1536 aa		2.62	□□□□□ -1.99
LRE1	YCL051W	CAB3	P36076	571 aa		2.62	□□□□□ -1.99
LRE1	YCL051W	SUL1	P38359	859 aa		2.62	□□□□□ -1.99
LRE1	YCL051W	PIC2	P40035	300 aa		2.62	□□□□□ -1.99
LRE1	YCL051W	RPL34A	P87262	121 aa	Predicted RBP	2.62	□□□□□ -1.99
LRE1	YCL051W	ESP1	Q03018	1630 aa		2.62	□□□□□ -1.99
LRE1	YCL051W	PHO4	P07270	312 aa	Known RBP	2.61	□□□□□ -1.99
LRE1	YCL051W	TAF13	P11747	167 aa		2.61	□□□□□ -1.99
LRE1	YCL051W	BAS1	P22035	811 aa		2.61	□□□□□ -1.99
LRE1	YCL051W	MTH1	P35198	433 aa		2.61	□□□□□ -1.99
LRE1	YCL051W	RGD1	P38339	666 aa		2.61	□□□□□ -1.99
LRE1	YCL051W	ZRG8	P40021	1076 aa		2.61	□□□□□ -1.99
LRE1	YCL051W	HFM1	P51979	1187 aa		2.61	□□□□□ -1.99
LRE1	YCL051W	ROD1	Q02805	837 aa		2.61	□□□□□ -1.99
LRE1	YCL051W	TAF7	Q05021	590 aa		2.61	□□□□□ -1.99
LRE1	YCL051W	MKK2	P32491	506 aa		2.6	□□□□□ -1.99
LRE1	YCL051W	GCD6	P32501	712 aa	Known RBP	2.6	□□□□□ -1.99
LRE1	YCL051W	RRT14	P40470	206 aa		2.6	□□□□□ -1.99
LRE1	YCL051W	AFT2	Q08957	416 aa		2.6	□□□□□ -1.99
LRE1	YCL051W	ACF2	Q12168	779 aa		2.6	□□□□□ -1.99
LRE1	YCL051W	RLF2	Q12495	606 aa		2.6	□□□□□ -1.99
LRE1	YCL051W	MLS1	P30952	554 aa		2.59	□□□□□ -1.99
LRE1	YCL051W	KTR4	P38131	464 aa		2.59	□□□□□ -1.99
LRE1	YCL051W	YMR206W	Q03695	313 aa		2.59	□□□□□ -1.99
LRE1	YCL051W	YBL113C	Q7M4S9	792 aa		2.59	□□□□□ -1.99
LRE1	YCL051W	CDC25	P04821	1589 aa		2.59	□□□□□ -2
LRE1	YCL051W	MYO2	P19524	1574 aa	Known RBP	2.59	□□□□□ -2
LRE1	YCL051W	BI4	P03879	638 aa		2.59	□□□□□ -2
LRE1	YCL051W	RPP2A	P05319	106 aa	Known RBP	2.59	□□□□□ -2
LRE1	YCL051W	UGA2	P38067	497 aa		2.59	□□□□□ -2
LRE1	YCL051W	FAA3	P39002	694 aa		2.59	□□□□□ -2
LRE1	YCL051W	GND2	P53319	492 aa		2.59	□□□□□ -2
LRE1	YCL051W	MUK1	Q02866	612 aa		2.59	□□□□□ -2
LRE1	YCL051W	NPC2	Q12408	173 aa		2.59	□□□□□ -2
LRE1	YCL051W	UFD4	P33202	1483 aa		2.58	□□□□□ -2
LRE1	YCL051W	RPA190	P10964	1664 aa	Known RBP	2.58	□□□□□ -2
LRE1	YCL051W	ENA1	P13587	1091 aa		2.58	□□□□□ -2
LRE1	YCL051W	ERG4	P25340	473 aa		2.58	□□□□□ -2
LRE1	YCL051W	PEX2	P32800	271 aa		2.58	□□□□□ -2
LRE1	YCL051W	SPC42	P36094	363 aa		2.58	□□□□□ -2
LRE1	YCL051W	TIM44	Q01852	431 aa		2.58	□□□□□ -2
LRE1	YCL051W	ENA2	Q01896	1091 aa		2.58	□□□□□ -2
LRE1	YCL051W	XYL2	Q07993	356 aa		2.58	□□□□□ -2
LRE1	YCL051W	ICT1	Q12385	394 aa		2.58	□□□□□ -2
LRE1	YCL051W	ENA5	Q12691	1091 aa		2.58	□□□□□ -2
LRE1	YCL051W	MDM10	P18409	493 aa		2.57	□□□□□ -2
LRE1	YCL051W	KAR4	P25583	335 aa		2.57	□□□□□ -2
LRE1	YCL051W	MXR1	P40029	184 aa		2.57	□□□□□ -2
LRE1	YCL051W	SIW14	P53965	281 aa		2.57	□□□□□ -2
LRE1	YCL051W	YAP7	Q08182	245 aa		2.57	□□□□□ -2
LRE1	YCL051W	RKR1	Q04781	1562 aa		2.57	□□□□□ -2
LRE1	YCL051W	TY2B-LR1	P0C2J3	1770 aa		2.57	□□□□□ -2
LRE1	YCL051W	TY2B-F	P0CX63	1770 aa		2.57	□□□□□ -2
LRE1	YCL051W	TY2B-GR2	P0CX64	1770 aa		2.57	□□□□□ -2
LRE1	YCL051W	TY2B-C	P25384	1770 aa		2.57	□□□□□ -2
LRE1	YCL051W	TY2B-DR2	Q03494	1770 aa		2.57	□□□□□ -2
LRE1	YCL051W	TY1B-DR1	Q03855	1755 aa		2.57	□□□□□ -2
LRE1	YCL051W	TY2B-DR3	Q07791	1770 aa	Known RBP	2.57	□□□□□ -2
LRE1	YCL051W	TY2B-OR1	Q12113	1770 aa		2.57	□□□□□ -2
LRE1	YCL051W	TY2B-DR1	Q12472	1770 aa		2.57	□□□□□ -2
LRE1	YCL051W	TY2B-OR2	Q12501	1770 aa		2.57	□□□□□ -2
LRE1	YCL051W	HXK1	P04806	485 aa	Known RBP	2.56	□□□□□ -2
LRE1	YCL051W	SSN2	P38931	1420 aa		2.56	□□□□□ -2
LRE1	YCL051W	HXT13	P39924	564 aa		2.56	□□□□□ -2
LRE1	YCL051W	ENT3	P47160	408 aa		2.56	□□□□□ -2
LRE1	YCL051W	NCS6	P53088	359 aa		2.56	□□□□□ -2
LRE1	YCL051W	HXT17	P53631	564 aa		2.56	□□□□□ -2
LRE1	YCL051W	HXT15	P54854	567 aa		2.56	□□□□□ -2
LRE1	YCL051W	HOF1	Q05080	669 aa		2.56	□□□□□ -2
LRE1	YCL051W	OXR1	Q08952	273 aa		2.56	□□□□□ -2
LRE1	YCL051W	TY1B-BR	Q12193	1756 aa		2.56	□□□□□ -2
LRE1	YCL051W	TY1B-GR3	Q12316	1755 aa		2.56	□□□□□ -2
LRE1	YCL051W	TY1B-OR	Q92393	1755 aa		2.56	□□□□□ -2
LRE1	YCL051W	DNF1	P32660	1571 aa		2.56	□□□□□ -2
LRE1	YCL051W	SCC2	Q04002	1493 aa		2.56	□□□□□ -2
LRE1	YCL051W	SYP1	P25623	870 aa	Known RBP	2.56	□□□□□ -2
LRE1	YCL051W	CNN1	P43618	361 aa		2.56	□□□□□ -2
LRE1	YCL051W	ACM1	Q08981	209 aa		2.56	□□□□□ -2
LRE1	YCL051W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
LRE1	YCL051W	LTE1	P07866	1435 aa		2.55	□□□□□ -2
LRE1	YCL051W	SPE1	P08432	466 aa		2.55	□□□□□ -2
LRE1	YCL051W	SLA2	P33338	968 aa		2.55	□□□□□ -2
LRE1	YCL051W	URM1	P40554	99 aa	Predicted RBP	2.55	□□□□□ -2
LRE1	YCL051W	MPH1	P40562	993 aa		2.55	□□□□□ -2
LRE1	YCL051W	CDA1	Q06702	301 aa		2.55	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms