RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	EMP47	P43555	445 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	VPS30	Q02948	557 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	UBX2	Q04228	584 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	KEL3	Q08979	651 aa	Predicted RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	BUG1	Q12191	341 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	ARG82	P07250	355 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	ERG11	P10614	530 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	SSB1	P11484	613 aa	Known RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	ISY1	P21374	235 aa	Predicted RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	ARG1	P22768	420 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	GSY1	P23337	708 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	HEL1	P36113	551 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	SSB2	P40150	613 aa	Known RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	YNL320W	P42840	284 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	ZPR1	P53303	486 aa	Known RBP	4.63	□□□□□ -1.67
RPG1	YBR079C	RET3	P53600	189 aa		4.63	□□□□□ -1.67
RPG1	YBR079C	SPP381	P38282	291 aa	Predicted RBP	4.62	□□□□□ -1.67
RPG1	YBR079C	BIM1	P40013	344 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	GUP1	P53154	560 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	HPC2	Q01448	625 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	MDM1	Q01846	1127 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	IRC3	Q06683	689 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	YEL076C-A	P0CX16	216 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	YLR464W	P0CX17	216 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	CHS3	P29465	1165 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	HXT1	P32465	570 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	YEL076C	P39971	216 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	MRX1	P40050	688 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	YIL055C	P40523	627 aa	Known RBP	4.62	□□□□□ -1.67
RPG1	YBR079C	THI6	P41835	540 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	CSM3	Q04659	317 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	SUE1	Q06524	206 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	OXR1	Q08952	273 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	PLP2	Q12017	286 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	DAS2	Q12084	232 aa		4.62	□□□□□ -1.67
RPG1	YBR079C	FOB1	O13329	566 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	APL1	P27351	700 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	TRK2	P28584	889 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	YKL023W	P36103	277 aa	Known RBP	4.61	□□□□□ -1.67
RPG1	YBR079C	SIC1	P38634	284 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	PIH1	P38768	344 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	UBP5	P39944	805 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	SET4	P42948	560 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	TOF1	P53840	1238 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	SMC6	Q12749	1114 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	GCG1	P32656	232 aa	Known RBP	4.61	□□□□□ -1.67
RPG1	YBR079C	OAF3	P36023	863 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	DMA1	P38823	416 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	TOM71	P38825	639 aa	Known RBP	4.61	□□□□□ -1.67
RPG1	YBR079C	RPC17	P47076	161 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	LYS4	P49367	693 aa	Predicted RBP	4.61	□□□□□ -1.67
RPG1	YBR079C	KAP114	P53067	1004 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	BTN2	P53286	410 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	FOL1	P53848	824 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	PNP1	Q05788	311 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	YPR078C	Q06813	372 aa		4.61	□□□□□ -1.67
RPG1	YBR079C	CCT3	P39077	534 aa	Known RBP	4.6	□□□□□ -1.67
RPG1	YBR079C	KAP123	P40069	1113 aa	Known RBP	4.6	□□□□□ -1.67
RPG1	YBR079C	ULP2	P40537	1034 aa	Predicted RBP	4.6	□□□□□ -1.67
RPG1	YBR079C	YJR142W	P47173	342 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	ADA2	Q02336	434 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	USA1	Q03714	838 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	DIB1	Q06819	143 aa	Predicted RBP	4.6	□□□□□ -1.67
RPG1	YBR079C	MLH2	Q07980	695 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	WRS1	Q12109	432 aa	Known RBP	4.6	□□□□□ -1.67
RPG1	YBR079C	PMR1	P13586	950 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	PRP9	P19736	530 aa	Known RBP	4.6	□□□□□ -1.67
RPG1	YBR079C	PDB1	P32473	366 aa	Known RBP	4.6	□□□□□ -1.67
RPG1	YBR079C	YKR018C	P36114	725 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	YSW1	P38280	609 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	RIX1	P38883	763 aa	Predicted RBP	4.6	□□□□□ -1.67
RPG1	YBR079C	APL6	P46682	809 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	NMD5	P46970	1048 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	PUS6	P53294	404 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	PGA2	P53903	129 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	YDR278C	Q05612	105 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	ECI1	Q05871	280 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	PIG1	Q06216	648 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	YDL057W	Q07379	328 aa		4.6	□□□□□ -1.67
RPG1	YBR079C	ILV1	P00927	576 aa	Known RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	PYC1	P11154	1178 aa	Known RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	KAR3	P17119	729 aa		4.59	□□□□□ -1.67
RPG1	YBR079C	SAM2	P19358	384 aa	Known RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	GPI10	P30777	616 aa		4.59	□□□□□ -1.67
RPG1	YBR079C	UBC6	P33296	250 aa	Predicted RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	NBP1	P52919	319 aa	Predicted RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	PRP3	Q03338	469 aa	Predicted RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	TAF9	Q05027	157 aa		4.59	□□□□□ -1.67
RPG1	YBR079C	PUS1	Q12211	544 aa	Known RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	FLO1	P32768	1537 aa		4.59	□□□□□ -1.67
RPG1	YBR079C	SPT2	P06843	333 aa	Predicted RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	RPS7A	P26786	190 aa	Known RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	NAM7	P30771	971 aa	Known RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	LOS1	P33418	1100 aa	Predicted RBP	4.59	□□□□□ -1.67
RPG1	YBR079C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
RPG1	YBR079C	YBR062C	P38239	180 aa		4.59	□□□□□ -1.67
RPG1	YBR079C	TDA3	P38758	523 aa		4.59	□□□□□ -1.67
RPG1	YBR079C	NDT80	P38830	627 aa		4.59	□□□□□ -1.67
RPG1	YBR079C	BRO1	P48582	844 aa		4.59	□□□□□ -1.67
RPG1	YBR079C	GAS5	Q08193	484 aa		4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 100.4 ms