RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W RIM11P38615 370 aa6.28□□□□□ -1.4
PRE7YBL041W CMR1Q12510 522 aaKnown RBP6.28□□□□□ -1.4
PRE7YBL041W FAR11P53917 953 aa6.27□□□□□ -1.41
PRE7YBL041W YOR223WQ12015 292 aa6.27□□□□□ -1.41
PRE7YBL041W ELM1P32801 640 aa6.26□□□□□ -1.41
PRE7YBL041W WHI3P34761 661 aaKnown RBP6.26□□□□□ -1.41
PRE7YBL041W GPT2P36148 743 aa6.26□□□□□ -1.41
PRE7YBL041W ETP1P38748 585 aaKnown RBP6.26□□□□□ -1.41
PRE7YBL041W UFD2P54860 961 aa6.26□□□□□ -1.41
PRE7YBL041W RSC4Q02206 625 aa6.26□□□□□ -1.41
PRE7YBL041W TRM44Q02648 567 aaKnown RBP6.26□□□□□ -1.41
PRE7YBL041W CRF1Q04930 467 aa6.26□□□□□ -1.41
PRE7YBL041W SPL2P38839 148 aa6.25□□□□□ -1.41
PRE7YBL041W PEA2P40091 420 aa6.25□□□□□ -1.41
PRE7YBL041W YIL089WP40500 205 aa6.25□□□□□ -1.41
PRE7YBL041W ATG1P53104 897 aa6.25□□□□□ -1.41
PRE7YBL041W YGR117CP53270 476 aa6.25□□□□□ -1.41
PRE7YBL041W RPT4P53549 437 aaKnown RBP6.25□□□□□ -1.41
PRE7YBL041W RRG1Q12167 365 aaPredicted RBP6.25□□□□□ -1.41
PRE7YBL041W POM152P39685 1337 aa6.25□□□□□ -1.41
PRE7YBL041W SUP35P05453 685 aaKnown RBP6.24□□□□□ -1.41
PRE7YBL041W SUI2P20459 304 aaKnown RBP6.24□□□□□ -1.41
PRE7YBL041W NPR1P22211 790 aa6.24□□□□□ -1.41
PRE7YBL041W MGM1P32266 881 aa6.24□□□□□ -1.41
PRE7YBL041W AFG2P32794 780 aa6.24□□□□□ -1.41
PRE7YBL041W LRG1P35688 1017 aa6.24□□□□□ -1.41
PRE7YBL041W VPS4P52917 437 aa6.24□□□□□ -1.41
PRE7YBL041W THI3Q07471 609 aa6.24□□□□□ -1.41
PRE7YBL041W YIG1Q08956 461 aa6.24□□□□□ -1.41
PRE7YBL041W MNL2Q12205 849 aa6.24□□□□□ -1.41
PRE7YBL041W HTS1P07263 546 aaKnown RBP6.23□□□□□ -1.41
PRE7YBL041W STV1P37296 890 aa6.23□□□□□ -1.41
PRE7YBL041W VPS27P40343 622 aaKnown RBP6.23□□□□□ -1.41
PRE7YBL041W YGR122WP53272 402 aa6.23□□□□□ -1.41
PRE7YBL041W DUS1P53759 423 aaKnown RBP6.23□□□□□ -1.41
PRE7YBL041W DOT1Q04089 582 aaKnown RBP6.23□□□□□ -1.41
PRE7YBL041W NOP8Q08287 484 aaPredicted RBP6.23□□□□□ -1.41
PRE7YBL041W RAD24P32641 659 aa6.22□□□□□ -1.41
PRE7YBL041W UBP12P39538 1254 aa6.22□□□□□ -1.41
PRE7YBL041W RPL34AP87262 121 aaPredicted RBP6.22□□□□□ -1.41
PRE7YBL041W MSH6Q03834 1242 aa6.22□□□□□ -1.41
PRE7YBL041W FLO11P08640 1367 aa6.21□□□□□ -1.41
PRE7YBL041W DUR1,2P32528 1835 aaKnown RBP6.21□□□□□ -1.42
PRE7YBL041W HPR1P17629 752 aaKnown RBP6.21□□□□□ -1.42
PRE7YBL041W RNQ1P25367 405 aa6.21□□□□□ -1.42
PRE7YBL041W SWC3P31376 625 aa6.21□□□□□ -1.42
PRE7YBL041W MMM1P41800 426 aa6.21□□□□□ -1.42
PRE7YBL041W GCV1P48015 400 aa6.21□□□□□ -1.42
PRE7YBL041W PRP42Q03776 544 aaKnown RBP6.21□□□□□ -1.42
PRE7YBL041W TRS120Q04183 1289 aa6.21□□□□□ -1.42
PRE7YBL041W SEG2P34250 1132 aa6.2□□□□□ -1.42
PRE7YBL041W NUG1P40010 520 aaKnown RBP6.2□□□□□ -1.42
PRE7YBL041W GSM1P42950 618 aa6.2□□□□□ -1.42
PRE7YBL041W IRC4Q03036 179 aa6.2□□□□□ -1.42
PRE7YBL041W CDC45Q08032 650 aa6.2□□□□□ -1.42
PRE7YBL041W PSF3Q12146 194 aa6.2□□□□□ -1.42
PRE7YBL041W SNU66Q12420 587 aaPredicted RBP6.2□□□□□ -1.42
PRE7YBL041W ADR1P07248 1323 aa6.2□□□□□ -1.42
PRE7YBL041W LCB1P25045 558 aaKnown RBP6.19□□□□□ -1.42
PRE7YBL041W POL12P38121 705 aaPredicted RBP6.19□□□□□ -1.42
PRE7YBL041W CIT3P43635 486 aa6.19□□□□□ -1.42
PRE7YBL041W ACF4P47129 309 aa6.19□□□□□ -1.42
PRE7YBL041W SEN54Q02825 467 aaPredicted RBP6.19□□□□□ -1.42
PRE7YBL041W ACK1Q07622 623 aaPredicted RBP6.19□□□□□ -1.42
PRE7YBL041W ALG6Q12001 544 aaKnown RBP6.19□□□□□ -1.42
PRE7YBL041W GSC2P40989 1895 aa6.18□□□□□ -1.42
PRE7YBL041W CBP1P07252 654 aa6.18□□□□□ -1.42
PRE7YBL041W RPS19AP07280 144 aaKnown RBP6.18□□□□□ -1.42
PRE7YBL041W RPS19BP07281 144 aaPredicted RBP6.18□□□□□ -1.42
PRE7YBL041W TRL1P09880 827 aaKnown RBP6.18□□□□□ -1.42
PRE7YBL041W YRB30P53107 440 aaPredicted RBP6.18□□□□□ -1.42
PRE7YBL041W CSI1Q04368 295 aa6.18□□□□□ -1.42
PRE7YBL041W BSC2Q05611 235 aa6.18□□□□□ -1.42
PRE7YBL041W TOS4Q06266 489 aa6.18□□□□□ -1.42
PRE7YBL041W WRS1Q12109 432 aaKnown RBP6.18□□□□□ -1.42
PRE7YBL041W FLP1P03870 423 aa6.17□□□□□ -1.42
PRE7YBL041W TY1A-LR4P0C2I8 440 aaKnown RBP6.17□□□□□ -1.42
PRE7YBL041W TY1A-DR6P0CX70 440 aa6.17□□□□□ -1.42
PRE7YBL041W TY1A-ER1P0CX71 440 aa6.17□□□□□ -1.42
PRE7YBL041W TY1A-LR2P0CX72 440 aa6.17□□□□□ -1.42
PRE7YBL041W TY1A-PLP0CX73 440 aa6.17□□□□□ -1.42
PRE7YBL041W TY1A-JR1P0CX74 440 aa6.17□□□□□ -1.42
PRE7YBL041W TY1A-LR3P0CX75 440 aa6.17□□□□□ -1.42
PRE7YBL041W TY1A-ML2P0CX76 440 aa6.17□□□□□ -1.42
PRE7YBL041W OYE3P41816 400 aaPredicted RBP6.17□□□□□ -1.42
PRE7YBL041W RRT6P53117 311 aaPredicted RBP6.17□□□□□ -1.42
PRE7YBL041W EAR1Q03212 550 aa6.17□□□□□ -1.42
PRE7YBL041W TY1A-GR1Q12085 440 aa6.17□□□□□ -1.42
PRE7YBL041W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.17□□□□□ -1.42
PRE7YBL041W TY1A-OLQ92392 440 aaKnown RBP6.17□□□□□ -1.42
PRE7YBL041W RPS7AP26786 190 aaKnown RBP6.16□□□□□ -1.42
PRE7YBL041W ECM2P38241 364 aaKnown RBP6.16□□□□□ -1.42
PRE7YBL041W YHL008CP38750 627 aa6.16□□□□□ -1.42
PRE7YBL041W MTC3P53077 123 aa6.16□□□□□ -1.42
PRE7YBL041W YNL011CP53980 444 aa6.16□□□□□ -1.42
PRE7YBL041W CDC55Q00362 526 aa6.16□□□□□ -1.42
PRE7YBL041W CSR2Q12734 1121 aa6.16□□□□□ -1.42
PRE7YBL041W DFG16Q99234 619 aa6.16□□□□□ -1.42
PRE7YBL041W GRS1P38088 690 aaKnown RBP6.15□□□□□ -1.42
PRE7YBL041W MSH4P40965 878 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 80 ms