RNA–Protein interactions for RNA: YAR042W

SWH1, Transcript of Protein similar to mammalian oxysterol-binding protein, yeast

Gene SWH1, Length 3,567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWH1	YAR042W	SPO11	P23179	398 aa		4.11	□□□□□ -1.75
SWH1	YAR042W	MAD1	P40957	749 aa		4.11	□□□□□ -1.75
SWH1	YAR042W	GIR2	Q03768	265 aa	Predicted RBP	4.11	□□□□□ -1.75
SWH1	YAR042W	DPL1	Q05567	589 aa		4.11	□□□□□ -1.75
SWH1	YAR042W	CWC2	Q12046	339 aa	Predicted RBP	4.11	□□□□□ -1.75
SWH1	YAR042W	TUS1	Q06412	1307 aa		4.11	□□□□□ -1.75
SWH1	YAR042W	SSA2	P10592	639 aa	Known RBP	4.1	□□□□□ -1.75
SWH1	YAR042W	CDC10	P25342	322 aa	Known RBP	4.1	□□□□□ -1.75
SWH1	YAR042W	CDC11	P32458	415 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	OAF3	P36023	863 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	DSF2	P38213	736 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	IES1	P43579	692 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	VPS53	P47061	822 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	YNL144C	P53907	740 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	ARO80	Q04052	950 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	ERV41	Q04651	352 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	SMY1	P32364	656 aa	Known RBP	4.1	□□□□□ -1.75
SWH1	YAR042W	RPT3	P33298	428 aa	Known RBP	4.1	□□□□□ -1.75
SWH1	YAR042W	VFA1	P40080	203 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	VID27	P40157	782 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	AIP1	P46680	615 aa	Known RBP	4.1	□□□□□ -1.75
SWH1	YAR042W	ATG36	P46983	293 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	DAS1	P47005	663 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	YGR153W	P48238	217 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	ERP6	P53198	216 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	MFM1	Q02783	413 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	VTI1	Q04338	217 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	YLR177W	Q06251	628 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	TFC3	P34111	1160 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	UBP14	P38237	781 aa	Known RBP	4.1	□□□□□ -1.75
SWH1	YAR042W	FZO1	P38297	855 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	YIL001W	P40560	513 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	HFM1	P51979	1187 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	RET3	P53600	189 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	CUS1	Q02554	436 aa	Predicted RBP	4.1	□□□□□ -1.75
SWH1	YAR042W	YKU80	Q04437	629 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	MRD1	Q06106	887 aa	Known RBP	4.1	□□□□□ -1.75
SWH1	YAR042W	GAS5	Q08193	484 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	YOL075C	Q08234	1294 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	ZRT2	Q12436	422 aa		4.1	□□□□□ -1.75
SWH1	YAR042W	PPR1	P07272	904 aa	Predicted RBP	4.09	□□□□□ -1.75
SWH1	YAR042W	ALG2	P43636	503 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	SPC24	Q04477	213 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	RRP15	Q06511	250 aa	Predicted RBP	4.09	□□□□□ -1.75
SWH1	YAR042W	SPO75	Q07798	868 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	DSE3	Q08729	430 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	FOB1	O13329	566 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	HIS4	P00815	799 aa	Known RBP	4.09	□□□□□ -1.75
SWH1	YAR042W	IME1	P21190	360 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	RIT1	P23796	513 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	YBR062C	P38239	180 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	KIC1	P38692	1080 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	RRP8	P38961	392 aa	Known RBP	4.09	□□□□□ -1.75
SWH1	YAR042W	INA22	P40576	216 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	UBP6	P43593	499 aa	Known RBP	4.09	□□□□□ -1.75
SWH1	YAR042W	KIN4	Q01919	800 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	TRS120	Q04183	1289 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	OPY2	Q06810	360 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	ALR1	Q08269	859 aa		4.09	□□□□□ -1.75
SWH1	YAR042W	UBC6	P33296	250 aa	Predicted RBP	4.09	□□□□□ -1.76
SWH1	YAR042W	NUF2	P33895	451 aa		4.09	□□□□□ -1.76
SWH1	YAR042W	MCD4	P36051	919 aa		4.09	□□□□□ -1.76
SWH1	YAR042W	HEK2	P38199	381 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	RIP-Chip
SWH1	YAR042W	ERG7	P38604	731 aa		4.09	□□□□□ -1.76
SWH1	YAR042W	TOM71	P38825	639 aa	Known RBP	4.09	□□□□□ -1.76
SWH1	YAR042W	CCT3	P39077	534 aa	Known RBP	4.09	□□□□□ -1.76
SWH1	YAR042W	APL6	P46682	809 aa		4.09	□□□□□ -1.76
SWH1	YAR042W	MDM1	Q01846	1127 aa		4.09	□□□□□ -1.76
SWH1	YAR042W	RPT6	Q01939	405 aa	Known RBP	4.09	□□□□□ -1.76
SWH1	YAR042W	POB3	Q04636	552 aa	Known RBP	4.09	□□□□□ -1.76
SWH1	YAR042W	PIG1	Q06216	648 aa		4.09	□□□□□ -1.76
SWH1	YAR042W	YPL216W	Q08964	1102 aa		4.09	□□□□□ -1.76
SWH1	YAR042W	NEW1	Q08972	1196 aa	Known RBP	4.09	□□□□□ -1.76
SWH1	YAR042W	RIB2	Q12362	591 aa	Known RBP	4.09	□□□□□ -1.76
SWH1	YAR042W	SSE1	P32589	693 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	RRP14	P36080	434 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	STT3	P39007	718 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	KAP123	P40069	1113 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	SNU71	P53207	620 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	SAS4	Q04003	481 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	FAR8	Q05040	523 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	YPR097W	Q06839	1073 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	GNT1	Q12096	491 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	RTP1	Q12751	981 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	APL1	P27351	700 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	PIH1	P38768	344 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	SMC2	P38989	1170 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	TIF4631	P39935	952 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	SIT1	P39980	628 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	UTP7	P40055	554 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	PRP42	Q03776	544 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	TAF9	Q05027	157 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	NOB1	Q08444	459 aa	Known RBP	4.08	□□□□□ -1.76
SWH1	YAR042W	YOR296W	Q08748	1289 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	TIP41	Q12199	356 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	NUC1	P08466	329 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	YMR085W	P0CF18	432 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	SEC66	P33754	206 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	STE13	P33894	931 aa		4.08	□□□□□ -1.76
SWH1	YAR042W	YBL086C	P38177	466 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms