RNA–Protein interactions for RNA: RDN18-1

RDN18-1, Transcript of 18S ribosomal RNA (18S rRNA), yeastyeast

Gene RDN18-1, Length 1,800 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN18-1RDN18-1 ISW1P38144 1129 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 SIP3P38717 1229 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 ROG3P43602 733 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 ORC4P54791 529 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 AAD16Q02895 342 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 ATG20Q07528 640 aa11.23□□□□□ -0.61
RDN18-1RDN18-1 RPC53P25441 422 aa11.22□□□□□ -0.61
RDN18-1RDN18-1 SMF1P38925 575 aa11.22□□□□□ -0.61
RDN18-1RDN18-1 ULP2P40537 1034 aaPredicted RBP11.22□□□□□ -0.61
RDN18-1RDN18-1 CCM1P48237 864 aaPredicted RBP11.22□□□□□ -0.61
RDN18-1RDN18-1 TCO89Q08921 799 aa11.22□□□□□ -0.61
RDN18-1RDN18-1 PFK1P16861 987 aaKnown RBP11.21□□□□□ -0.61
RDN18-1RDN18-1 PWP2P25635 923 aaKnown RBP11.21□□□□□ -0.61
RDN18-1RDN18-1 BUD16P39988 312 aa11.21□□□□□ -0.61
RDN18-1RDN18-1 NBP1P52919 319 aaPredicted RBP11.21□□□□□ -0.61
RDN18-1RDN18-1 MAL13P53338 473 aa11.21□□□□□ -0.61
RDN18-1RDN18-1 NGL3Q03210 505 aa11.21□□□□□ -0.61
RDN18-1RDN18-1 FUS2Q05670 677 aa11.21□□□□□ -0.61
RDN18-1RDN18-1 PHR1P05066 565 aaKnown RBP RIP-Chip data11.21□□□□□ -0.62not detected
RDN18-1RDN18-1 HPR1P17629 752 aaKnown RBP11.21□□□□□ -0.62
RDN18-1RDN18-1 VHR2P40041 505 aa11.21□□□□□ -0.62
RDN18-1RDN18-1 NUP82P40368 713 aa11.21□□□□□ -0.62
RDN18-1RDN18-1 DIP5P53388 608 aa11.21□□□□□ -0.62
RDN18-1RDN18-1 SOV1Q04748 898 aa11.21□□□□□ -0.62
RDN18-1RDN18-1 ARP6Q12509 438 aa11.21□□□□□ -0.62
RDN18-1RDN18-1 SCP160P06105 1222 aaKnown RBP RIP-Chip data11.2□□□□□ -0.62not detected
RDN18-1RDN18-1 DAL7P21826 554 aa11.2□□□□□ -0.62
RDN18-1RDN18-1 PAP1P29468 568 aaKnown RBP11.2□□□□□ -0.62
RDN18-1RDN18-1 AVT3P36062 692 aa11.2□□□□□ -0.62
RDN18-1RDN18-1 UTP13Q05946 817 aaKnown RBP11.2□□□□□ -0.62
RDN18-1RDN18-1 MAK16P10962 306 aaPredicted RBP11.19□□□□□ -0.62
RDN18-1RDN18-1 SSB1P11484 613 aaKnown RBP11.19□□□□□ -0.62
RDN18-1RDN18-1 SSB2P40150 613 aaKnown RBP11.19□□□□□ -0.62
RDN18-1RDN18-1 OYE2Q03558 400 aaKnown RBP11.19□□□□□ -0.62
RDN18-1RDN18-1 ATG23Q06671 453 aa11.19□□□□□ -0.62
RDN18-1RDN18-1 CBP1P07252 654 aa11.19□□□□□ -0.62
RDN18-1RDN18-1 CDC60P26637 1090 aaKnown RBP11.19□□□□□ -0.62
RDN18-1RDN18-1 YEL043WP32618 956 aa11.19□□□□□ -0.62
RDN18-1RDN18-1 UGA4P32837 571 aa11.19□□□□□ -0.62
RDN18-1RDN18-1 XRS2P33301 854 aa11.19□□□□□ -0.62
RDN18-1RDN18-1 RRP1P35178 278 aaPredicted RBP11.19□□□□□ -0.62
RDN18-1RDN18-1 CCT4P39078 528 aaKnown RBP11.19□□□□□ -0.62
RDN18-1RDN18-1 WHI4Q07655 649 aaKnown RBP11.19□□□□□ -0.62
RDN18-1RDN18-1 SIL1Q08199 421 aa11.18□□□□□ -0.62
RDN18-1RDN18-1 PLP2Q12017 286 aa11.18□□□□□ -0.62
RDN18-1RDN18-1 SUP45P12385 437 aaKnown RBP11.17□□□□□ -0.62
RDN18-1RDN18-1 RPO26P20435 155 aa11.17□□□□□ -0.62
RDN18-1RDN18-1 APL1P27351 700 aa11.17□□□□□ -0.62
RDN18-1RDN18-1 HXT1P32465 570 aa11.17□□□□□ -0.62
RDN18-1RDN18-1 YEL1P34225 687 aa11.17□□□□□ -0.62
RDN18-1RDN18-1 PHO88P38264 188 aaPredicted RBP11.17□□□□□ -0.62
RDN18-1RDN18-1 SET5P38890 526 aaKnown RBP11.17□□□□□ -0.62
RDN18-1RDN18-1 NIT1P40447 199 aa11.17□□□□□ -0.62
RDN18-1RDN18-1 YGR117CP53270 476 aa11.17□□□□□ -0.62
RDN18-1RDN18-1 ESS1P22696 170 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 SRB4P32569 687 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 PGM2P37012 569 aaKnown RBP11.16□□□□□ -0.62
RDN18-1RDN18-1 FET4P40988 552 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 YFL034WP43564 1073 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 SOL4P53315 255 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 CKI1P20485 582 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 UBP11P36026 717 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 YMR124WP39523 943 aaKnown RBP11.16□□□□□ -0.62
RDN18-1RDN18-1 MMM1P41800 426 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 CTR1P49573 406 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 GYL1Q04322 720 aa11.16□□□□□ -0.62
RDN18-1RDN18-1 YLR326WQ06170 240 aaKnown RBP11.16□□□□□ -0.62
RDN18-1RDN18-1 FAL1Q12099 399 aaKnown RBP11.16□□□□□ -0.62
RDN18-1RDN18-1 RPS9BP05755 195 aaKnown RBP11.15□□□□□ -0.62
RDN18-1RDN18-1 GLC3P32775 704 aa11.15□□□□□ -0.62
RDN18-1RDN18-1 KIC1P38692 1080 aa11.15□□□□□ -0.62
RDN18-1RDN18-1 SMC2P38989 1170 aaKnown RBP11.15□□□□□ -0.62
RDN18-1RDN18-1 ACA1P39970 489 aa11.15□□□□□ -0.62
RDN18-1RDN18-1 MVP1P40959 511 aaKnown RBP11.15□□□□□ -0.62
RDN18-1RDN18-1 TMA64Q04600 565 aaKnown RBP11.15□□□□□ -0.62
RDN18-1RDN18-1 GIN4Q12263 1142 aa11.15□□□□□ -0.62
RDN18-1RDN18-1 OSH2Q12451 1283 aa11.15□□□□□ -0.62
RDN18-1RDN18-1 RMP1Q12530 201 aa11.15□□□□□ -0.62
RDN18-1RDN18-1 GPD2P41911 440 aaKnown RBP11.14□□□□□ -0.63
RDN18-1RDN18-1 YPL277CQ08989 487 aa11.14□□□□□ -0.63
RDN18-1RDN18-1 ERG12P07277 443 aa11.14□□□□□ -0.63
RDN18-1RDN18-1 RAD18P10862 487 aa11.14□□□□□ -0.63
RDN18-1RDN18-1 PRP22P24384 1145 aaKnown RBP11.14□□□□□ -0.63
RDN18-1RDN18-1 SMC1P32908 1225 aa11.14□□□□□ -0.63
RDN18-1RDN18-1 TOF1P53840 1238 aa11.14□□□□□ -0.63
RDN18-1RDN18-1 SEC5P89102 971 aa11.14□□□□□ -0.63
RDN18-1RDN18-1 MLH2Q07980 695 aa11.14□□□□□ -0.63
RDN18-1RDN18-1 DAS2Q12084 232 aa11.14□□□□□ -0.63
RDN18-1RDN18-1 MED1Q12321 566 aa11.14□□□□□ -0.63
RDN18-1RDN18-1 BYE1P36106 594 aa11.13□□□□□ -0.63
RDN18-1RDN18-1 SAP1P39955 897 aaKnown RBP11.13□□□□□ -0.63
RDN18-1RDN18-1 SQS1P53866 767 aaKnown RBP11.13□□□□□ -0.63
RDN18-1RDN18-1 ARK1P53974 638 aa11.13□□□□□ -0.63
RDN18-1RDN18-1 ALD6P54115 500 aaKnown RBP11.13□□□□□ -0.63
RDN18-1RDN18-1 YML037CQ03703 340 aa11.13□□□□□ -0.63
RDN18-1RDN18-1 OPY2Q06810 360 aa11.13□□□□□ -0.63
RDN18-1RDN18-1 CLN3P13365 580 aa11.12□□□□□ -0.63
RDN18-1RDN18-1 MSH1P25846 959 aa11.12□□□□□ -0.63
RDN18-1RDN18-1 NIP100P33420 868 aa11.12□□□□□ -0.63
RDN18-1RDN18-1 YKL023WP36103 277 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 5,963 RNA–protein pairs in 86 ms