RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 RRP1P56182 461 aaKnown RBP22.35■■□□□ 1.17
PHGDH-230ENST00000641927 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.35■■□□□ 1.17
PHGDH-230ENST00000641927 ANXA1P04083 346 aa22.34■■□□□ 1.17
PHGDH-230ENST00000641927 MYL6BP14649 208 aa22.34■■□□□ 1.17
PHGDH-230ENST00000641927 PIP4K2AP48426 406 aaPredicted RBP22.34■■□□□ 1.17
PHGDH-230ENST00000641927 ITPK1Q13572 414 aa22.34■■□□□ 1.17
PHGDH-230ENST00000641927 NOB1Q9ULX3 412 aaKnown RBP22.34■■□□□ 1.17
PHGDH-230ENST00000641927 KIF16BQ96L93 1317 aa22.34■■□□□ 1.17
PHGDH-230ENST00000641927 TJP1Q07157 1748 aa22.34■■□□□ 1.17
PHGDH-230ENST00000641927 A1BGP04217 495 aa22.33■■□□□ 1.17
PHGDH-230ENST00000641927 CYP19A1P11511 503 aaPredicted RBP22.33■■□□□ 1.16
PHGDH-230ENST00000641927 DDX21Q9NR30 783 aaKnown RBP eCLIP22.33■■□□□ 1.16
PHGDH-230ENST00000641927 PROSER3Q2NL68 480 aa22.32■■□□□ 1.16
PHGDH-230ENST00000641927 LY75O60449 1722 aa22.31■■□□□ 1.16
PHGDH-230ENST00000641927 IPO8O15397 1037 aaKnown RBP22.31■■□□□ 1.16
PHGDH-230ENST00000641927 BRPF1P55201 1214 aaPredicted RBP22.31■■□□□ 1.16
PHGDH-230ENST00000641927 SF3B2Q13435 895 aaKnown RBP22.31■■□□□ 1.16
PHGDH-230ENST00000641927 PDIA6Q15084 440 aa22.3■■□□□ 1.16
PHGDH-230ENST00000641927 ZKSCAN2Q63HK3 967 aa22.3■■□□□ 1.16
PHGDH-230ENST00000641927 G2E3Q7L622 706 aa22.3■■□□□ 1.16
PHGDH-230ENST00000641927 PHAXQ9H814 394 aaKnown RBP22.3■■□□□ 1.16
PHGDH-230ENST00000641927 HYPKQ9NX55 129 aa22.3■■□□□ 1.16
PHGDH-230ENST00000641927 ZNF330Q9Y3S2 320 aaPredicted RBP22.3■■□□□ 1.16
PHGDH-230ENST00000641927 TNS1Q9HBL0 1735 aaKnown RBP22.3■■□□□ 1.16
PHGDH-230ENST00000641927 ERBB4Q15303 1308 aa22.3■■□□□ 1.16
PHGDH-230ENST00000641927 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
PHGDH-230ENST00000641927 PLSCR1O15162 318 aa22.29■■□□□ 1.16
PHGDH-230ENST00000641927 CRKLP46109 303 aaKnown RBP22.29■■□□□ 1.16
PHGDH-230ENST00000641927 FLIIQ13045 1269 aa22.29■■□□□ 1.16
PHGDH-230ENST00000641927 NBPF14Q5TI25 921 aa22.29■■□□□ 1.16
PHGDH-230ENST00000641927 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
PHGDH-230ENST00000641927 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
PHGDH-230ENST00000641927 LINC00116Q8NCU8 138 aa22.29■■□□□ 1.16
PHGDH-230ENST00000641927 ZNF831Q5JPB2 1677 aa22.28■■□□□ 1.16
PHGDH-230ENST00000641927 RNF123Q5XPI4 1314 aa22.28■■□□□ 1.16
PHGDH-230ENST00000641927 FKBP5Q13451 457 aaPredicted RBP22.28■■□□□ 1.16
PHGDH-230ENST00000641927 SLC27A3Q5K4L6 730 aa22.28■■□□□ 1.16
PHGDH-230ENST00000641927 CCDC87Q9NVE4 849 aa22.28■■□□□ 1.16
PHGDH-230ENST00000641927 AIMP1Q12904 312 aaKnown RBP22.27■■□□□ 1.16
PHGDH-230ENST00000641927 TXNRD1Q16881 649 aa22.27■■□□□ 1.16
PHGDH-230ENST00000641927 ZBTB1Q9Y2K1 713 aa22.27■■□□□ 1.16
PHGDH-230ENST00000641927 CICQ96RK0 1608 aaPredicted RBP22.27■■□□□ 1.16
PHGDH-230ENST00000641927 PTPRCP08575 1304 aa22.27■■□□□ 1.16
PHGDH-230ENST00000641927 CACNA1FO60840 1977 aa22.27■■□□□ 1.15
PHGDH-230ENST00000641927 ATF7IPQ6VMQ6 1270 aa22.26■■□□□ 1.15
PHGDH-230ENST00000641927 CLUAP1Q96AJ1 413 aa22.26■■□□□ 1.15
PHGDH-230ENST00000641927 LRRC4BQ9NT99 713 aa22.26■■□□□ 1.15
PHGDH-230ENST00000641927 NEFLP07196 543 aa22.26■■□□□ 1.15
PHGDH-230ENST00000641927 IRX6P78412 446 aaPredicted RBP22.26■■□□□ 1.15
PHGDH-230ENST00000641927 COL5A3P25940 1745 aaPredicted RBP22.25■■□□□ 1.15
PHGDH-230ENST00000641927 TRIM27P14373 513 aa22.25■■□□□ 1.15
PHGDH-230ENST00000641927 INTS5Q6P9B9 1019 aaKnown RBP22.25■■□□□ 1.15
PHGDH-230ENST00000641927 NPM2Q86SE8 214 aaKnown RBP22.25■■□□□ 1.15
PHGDH-230ENST00000641927 FTSJ3Q8IY81 847 aaKnown RBP22.25■■□□□ 1.15
PHGDH-230ENST00000641927 XAGE3Q8WTP9 111 aa22.25■■□□□ 1.15
PHGDH-230ENST00000641927 ARXQ96QS3 562 aa22.25■■□□□ 1.15
PHGDH-230ENST00000641927 COPS6Q7L5N1 327 aa22.24■■□□□ 1.15
PHGDH-230ENST00000641927 PROM2Q8N271 834 aa22.24■■□□□ 1.15
PHGDH-230ENST00000641927 ARHGAP45Q92619 1136 aa22.24■■□□□ 1.15
PHGDH-230ENST00000641927 API5Q9BZZ5 524 aaKnown RBP22.24■■□□□ 1.15
PHGDH-230ENST00000641927 TNNQ9UQP3 1299 aa22.24■■□□□ 1.15
PHGDH-230ENST00000641927 BAG6P46379 1132 aa22.23■■□□□ 1.15
PHGDH-230ENST00000641927 EN1Q05925 392 aaPredicted RBP22.23■■□□□ 1.15
PHGDH-230ENST00000641927 C20orf194Q5TEA3 1177 aa22.23■■□□□ 1.15
PHGDH-230ENST00000641927 LRP10Q7Z4F1 713 aa22.23■■□□□ 1.15
PHGDH-230ENST00000641927 CNTNAP4Q9C0A0 1308 aa22.22■■□□□ 1.15
PHGDH-230ENST00000641927 DDX58O95786 925 aaKnown RBP22.22■■□□□ 1.15
PHGDH-230ENST00000641927 MS4A1P11836 297 aa22.22■■□□□ 1.15
PHGDH-230ENST00000641927 IL6STP40189 918 aaPredicted RBP22.22■■□□□ 1.15
PHGDH-230ENST00000641927 DZIP1LQ8IYY4 767 aaKnown RBP22.22■■□□□ 1.15
PHGDH-230ENST00000641927 PANK1Q8TE04 598 aa22.22■■□□□ 1.15
PHGDH-230ENST00000641927 TAF1LQ8IZX4 1826 aa22.21■■□□□ 1.15
PHGDH-230ENST00000641927 AK7Q96M32 723 aa22.21■■□□□ 1.15
PHGDH-230ENST00000641927 F6X3S4 739 aa22.2■■□□□ 1.15
PHGDH-230ENST00000641927 GNPATO15228 680 aa22.2■■□□□ 1.15
PHGDH-230ENST00000641927 EZH2Q15910 746 aaKnown RBP22.2■■□□□ 1.15
PHGDH-230ENST00000641927 RC3H1Q5TC82 1133 aaKnown RBP22.2■■□□□ 1.15
PHGDH-230ENST00000641927 CCDC125Q86Z20 511 aa22.2■■□□□ 1.15
PHGDH-230ENST00000641927 MYH14Q7Z406 1995 aaKnown RBP22.2■■□□□ 1.14
PHGDH-230ENST00000641927 PI4KAP2A4QPH2 592 aa22.2■■□□□ 1.14
PHGDH-230ENST00000641927 HMGB2P26583 209 aaKnown RBP22.2■■□□□ 1.14
PHGDH-230ENST00000641927 PDE3AQ14432 1141 aa22.2■■□□□ 1.14
PHGDH-230ENST00000641927 SLC4A10Q6U841 1118 aa22.2■■□□□ 1.14
PHGDH-230ENST00000641927 RIC3Q7Z5B4 369 aa22.2■■□□□ 1.14
PHGDH-230ENST00000641927 DEFB132Q7Z7B7 95 aa22.2■■□□□ 1.14
PHGDH-230ENST00000641927 PI4KAP1Q8N8J0 262 aa22.2■■□□□ 1.14
PHGDH-230ENST00000641927 C4BP0C0L5 1744 aa22.2■■□□□ 1.14
PHGDH-230ENST00000641927 KIF6Q6ZMV9 814 aa22.19■■□□□ 1.14
PHGDH-230ENST00000641927 TTLL7Q6ZT98 887 aa22.19■■□□□ 1.14
PHGDH-230ENST00000641927 CAMKK2Q96RR4 588 aa22.19■■□□□ 1.14
PHGDH-230ENST00000641927 RGPD3A6NKT7 1758 aaPredicted RBP22.19■■□□□ 1.14
PHGDH-230ENST00000641927 RGPD4Q7Z3J3 1758 aa22.19■■□□□ 1.14
PHGDH-230ENST00000641927 RLBP1P12271 317 aa22.18■■□□□ 1.14
PHGDH-230ENST00000641927 ANKRD13DQ6ZTN6 518 aa22.18■■□□□ 1.14
PHGDH-230ENST00000641927 MAP3K2Q9Y2U5 619 aa22.18■■□□□ 1.14
PHGDH-230ENST00000641927 RREB1Q92766 1687 aa22.17■■□□□ 1.14
PHGDH-230ENST00000641927 EIF5P55010 431 aaKnown RBP22.17■■□□□ 1.14
PHGDH-230ENST00000641927 KSR2Q6VAB6 950 aa22.17■■□□□ 1.14
PHGDH-230ENST00000641927 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
PHGDH-230ENST00000641927 ZBTB3Q9H5J0 574 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms