RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 CHL1O00533 1208 aa10.96□□□□□ -0.65
PAX6-259ENST00000639916 ARHGAP45Q92619 1136 aa10.96□□□□□ -0.65
PAX6-259ENST00000639916 ZBTB40Q9NUA8 1239 aa10.96□□□□□ -0.65
PAX6-259ENST00000639916 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.96□□□□□ -0.65
PAX6-259ENST00000639916 KDRP35968 1356 aa10.96□□□□□ -0.66
PAX6-259ENST00000639916 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.96□□□□□ -0.66
PAX6-259ENST00000639916 CAVIN1Q6NZI2 390 aaKnown RBP10.96□□□□□ -0.66
PAX6-259ENST00000639916 RTF1Q92541 710 aaKnown RBP10.96□□□□□ -0.66
PAX6-259ENST00000639916 LTV1Q96GA3 475 aaPredicted RBP10.96□□□□□ -0.66
PAX6-259ENST00000639916 YY1AP1Q9H869 796 aa10.96□□□□□ -0.66
PAX6-259ENST00000639916 PDZRN3Q9UPQ7 1066 aa10.96□□□□□ -0.66
PAX6-259ENST00000639916 CLGNO14967 610 aa10.95□□□□□ -0.66
PAX6-259ENST00000639916 GEMIN8Q9NWZ8 242 aaKnown RBP10.95□□□□□ -0.66
PAX6-259ENST00000639916 KIF24Q5T7B8 1368 aa10.95□□□□□ -0.66
PAX6-259ENST00000639916 SSFA2P28290 1259 aa10.95□□□□□ -0.66
PAX6-259ENST00000639916 SNX21Q969T3 373 aa10.95□□□□□ -0.66
PAX6-259ENST00000639916 HDAC1Q13547 482 aaPredicted RBP10.94□□□□□ -0.66
PAX6-259ENST00000639916 KRT24Q2M2I5 525 aa10.94□□□□□ -0.66
PAX6-259ENST00000639916 CLEC17AQ6ZS10 378 aa10.94□□□□□ -0.66
PAX6-259ENST00000639916 PROSER2Q86WR7 435 aaPredicted RBP10.94□□□□□ -0.66
PAX6-259ENST00000639916 ORAI2Q96SN7 254 aa10.94□□□□□ -0.66
PAX6-259ENST00000639916 GAS2L2Q8NHY3 880 aa10.94□□□□□ -0.66
PAX6-259ENST00000639916 MIS18AQ9NYP9 233 aa10.94□□□□□ -0.66
PAX6-259ENST00000639916 MARF1Q9Y4F3 1742 aaKnown RBP10.94□□□□□ -0.66
PAX6-259ENST00000639916 BAG4O95429 457 aaKnown RBP10.93□□□□□ -0.66
PAX6-259ENST00000639916 PIBF1Q8WXW3 757 aa10.93□□□□□ -0.66
PAX6-259ENST00000639916 NOLC1Q14978 699 aaKnown RBP eCLIP10.93□□□□□ -0.66
PAX6-259ENST00000639916 TERF2Q15554 542 aa10.93□□□□□ -0.66
PAX6-259ENST00000639916 TSPYL1Q9H0U9 437 aa10.93□□□□□ -0.66
PAX6-259ENST00000639916 CALCOCO1Q9P1Z2 691 aa10.93□□□□□ -0.66
PAX6-259ENST00000639916 CRB1P82279 1406 aa10.93□□□□□ -0.66
PAX6-259ENST00000639916 ZBTB7BO15156 539 aaPredicted RBP10.92□□□□□ -0.66
PAX6-259ENST00000639916 APPP05067 770 aa10.92□□□□□ -0.66
PAX6-259ENST00000639916 PTMAP06454 111 aaKnown RBP10.92□□□□□ -0.66
PAX6-259ENST00000639916 HAP1P54257 671 aaPredicted RBP10.92□□□□□ -0.66
PAX6-259ENST00000639916 FOXD4L1Q9NU39 408 aa10.92□□□□□ -0.66
PAX6-259ENST00000639916 IP6K1Q92551 441 aa10.91□□□□□ -0.66
PAX6-259ENST00000639916 API5Q9BZZ5 524 aaKnown RBP10.91□□□□□ -0.66
PAX6-259ENST00000639916 KIAA0232Q92628 1395 aa10.91□□□□□ -0.66
PAX6-259ENST00000639916 USP54Q70EL1 1684 aa10.91□□□□□ -0.66
PAX6-259ENST00000639916 KCNA4P22459 653 aa10.91□□□□□ -0.66
PAX6-259ENST00000639916 FKBP5Q13451 457 aaPredicted RBP10.91□□□□□ -0.66
PAX6-259ENST00000639916 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
PAX6-259ENST00000639916 USHBP1Q8N6Y0 703 aa10.91□□□□□ -0.66
PAX6-259ENST00000639916 KCNH5Q8NCM2 988 aa10.91□□□□□ -0.66
PAX6-259ENST00000639916 FEZ2Q9UHY8 353 aaPredicted RBP10.91□□□□□ -0.66
PAX6-259ENST00000639916 TSPYL4Q9UJ04 414 aa10.91□□□□□ -0.66
PAX6-259ENST00000639916 ABCC4O15439 1325 aa10.91□□□□□ -0.66
PAX6-259ENST00000639916 GNAT3A8MTJ3 354 aa10.9□□□□□ -0.66
PAX6-259ENST00000639916 C17orf53Q8N3J3 647 aaPredicted RBP10.9□□□□□ -0.66
PAX6-259ENST00000639916 RTL1A6NKG5 1358 aa10.9□□□□□ -0.66
PAX6-259ENST00000639916 HTATSF1O43719 755 aaKnown RBP10.9□□□□□ -0.66
PAX6-259ENST00000639916 C19orf44Q9H6X5 657 aa10.9□□□□□ -0.66
PAX6-259ENST00000639916 EFCC1Q9HA90 598 aa10.9□□□□□ -0.66
PAX6-259ENST00000639916 CTNNA3Q9UI47 895 aa10.9□□□□□ -0.66
PAX6-259ENST00000639916 ERICH4A6NGS2 130 aa10.89□□□□□ -0.67
PAX6-259ENST00000639916 CTIFO43310 598 aaKnown RBP10.89□□□□□ -0.67
PAX6-259ENST00000639916 PRR29P0C7W0 189 aa10.89□□□□□ -0.67
PAX6-259ENST00000639916 TRERF1Q96PN7 1200 aa10.89□□□□□ -0.67
PAX6-259ENST00000639916 C1orf115Q9H7X2 142 aa10.89□□□□□ -0.67
PAX6-259ENST00000639916 LOC102724159A0A0B4J2E5 919 aa10.89□□□□□ -0.67
PAX6-259ENST00000639916 RIOK3O14730 519 aaKnown RBP10.89□□□□□ -0.67
PAX6-259ENST00000639916 PWP2Q15269 919 aaKnown RBP10.89□□□□□ -0.67
PAX6-259ENST00000639916 LMBRD1Q9NUN5 540 aa10.89□□□□□ -0.67
PAX6-259ENST00000639916 SPTLC3Q9NUV7 552 aa10.89□□□□□ -0.67
PAX6-259ENST00000639916 DDX41Q9UJV9 622 aaKnown RBP10.89□□□□□ -0.67
PAX6-259ENST00000639916 NWD1Q149M9 1564 aa10.89□□□□□ -0.67
PAX6-259ENST00000639916 GCP02774 474 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 AXDND1Q5T1B0 1012 aaPredicted RBP10.88□□□□□ -0.67
PAX6-259ENST00000639916 NBPF6Q5VWK0 638 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 MCTP1Q6DN14 999 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 NBPF4Q96M43 638 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
PAX6-259ENST00000639916 LTN1O94822 1766 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 SLC4A2P04920 1241 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 LRSAM1Q6UWE0 723 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 NFAT5O94916 1531 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 CD2BP2O95400 341 aaKnown RBP10.88□□□□□ -0.67
PAX6-259ENST00000639916 KRT28Q7Z3Y7 464 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 IL17REQ8NFR9 667 aa10.88□□□□□ -0.67
PAX6-259ENST00000639916 ZNF622Q969S3 477 aaKnown RBP eCLIP10.88□□□□□ -0.67
PAX6-259ENST00000639916 MPNDQ8N594 471 aa10.87□□□□□ -0.67
PAX6-259ENST00000639916 RNF214Q8ND24 703 aa10.87□□□□□ -0.67
PAX6-259ENST00000639916 MORC2Q9Y6X9 1032 aaPredicted RBP10.87□□□□□ -0.67
PAX6-259ENST00000639916 NCBP1Q09161 790 aaKnown RBP10.87□□□□□ -0.67
PAX6-259ENST00000639916 MAP3K5Q99683 1374 aa10.86□□□□□ -0.67
PAX6-259ENST00000639916 C1orf167Q5SNV9 1468 aa10.86□□□□□ -0.67
PAX6-259ENST00000639916 SYCE3A1L190 88 aa10.86□□□□□ -0.67
PAX6-259ENST00000639916 NUCB1Q02818 461 aa10.86□□□□□ -0.67
PAX6-259ENST00000639916 INTS3Q68E01 1043 aaKnown RBP10.86□□□□□ -0.67
PAX6-259ENST00000639916 DIAPH3Q9NSV4 1193 aa10.86□□□□□ -0.67
PAX6-259ENST00000639916 ATF3P18847 181 aa10.86□□□□□ -0.67
PAX6-259ENST00000639916 FAM193AP78312 1265 aa10.86□□□□□ -0.67
PAX6-259ENST00000639916 ARHGEF25Q86VW2 580 aa10.86□□□□□ -0.67
PAX6-259ENST00000639916 GPT2Q8TD30 523 aa10.86□□□□□ -0.67
PAX6-259ENST00000639916 LRRC59Q96AG4 307 aaKnown RBP10.86□□□□□ -0.67
PAX6-259ENST00000639916 PTPRCP08575 1304 aa10.85□□□□□ -0.67
PAX6-259ENST00000639916 TAF7Q15545 349 aaPredicted RBP10.85□□□□□ -0.67
PAX6-259ENST00000639916 SIRT2Q8IXJ6 389 aa10.85□□□□□ -0.67
PAX6-259ENST00000639916 TTC12Q9H892 705 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms