RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 URI1O94763 535 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-225ENST00000636389 TOP1P11387 765 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-225ENST00000636389 GUCY1B3Q02153 619 aa20.23■□□□□ 0.83
CACNA1A-225ENST00000636389 ZSCAN12O43309 604 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 SPECC1LQ69YQ0 1117 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 FBF1Q8TES7 1133 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 TTC36A6NLP5 189 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 GCC1Q96CN9 775 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 FAM107BQ9H098 131 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 SMC1BQ8NDV3 1235 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 ALS2CR12Q96Q35 445 aa20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 MTIF2P46199 727 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 NAA15Q9BXJ9 866 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 IQCGQ9H095 443 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-225ENST00000636389 SULT6B1Q6IMI4 303 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 SFPQP23246 707 aaKnown RBP eCLIP20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 KRT32Q14532 448 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 CCDC174Q6PII3 467 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 PDCL2Q8N4E4 241 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 CCDC6Q16204 474 aa20.21■□□□□ 0.83
CACNA1A-225ENST00000636389 A0A087WZG4 1122 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 TAF12Q16514 161 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 U3KPZ7 1027 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 CTCFLQ8NI51 663 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 SRCIN1Q9C0H9 1055 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 PRDM11Q9NQV5 511 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 PDZRN3Q9UPQ7 1066 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 SNX16P57768 344 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 TTC21AQ8NDW8 1320 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 CCDC144CPQ8IYA2 1237 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 CALML4Q96GE6 196 aa20.2■□□□□ 0.82
CACNA1A-225ENST00000636389 XPCQ01831 940 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 ATP2C2O75185 946 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 CEP135Q66GS9 1140 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 SATB1Q01826 763 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 TXNDC2Q86VQ3 553 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 IQCA1Q86XH1 822 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 BBXQ8WY36 941 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 SSRP1Q08945 709 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 CCDC40Q4G0X9 1142 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 TRERF1Q96PN7 1200 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 PRDM10Q9NQV6 1147 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 JADE2Q9NQC1 790 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 BRPF3Q9ULD4 1205 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 SLC12A7Q9Y666 1083 aa20.19■□□□□ 0.82
CACNA1A-225ENST00000636389 JPH4Q96JJ6 628 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 FANCIQ9NVI1 1328 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 AAMPQ13685 434 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 GRPEL1Q9HAV7 217 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 MYO1BO43795 1136 aa20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 EXOSC9Q06265 439 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
CACNA1A-225ENST00000636389 RFX1P22670 979 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 TBC1D5Q92609 795 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 IL1RAPL2Q9NP60 686 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 ANAPC4Q9UJX5 808 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 SYCE3A1L190 88 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 SIRT1Q96EB6 747 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 KIF18AQ8NI77 898 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 CLEC11AQ9Y240 323 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 PHACTR2O75167 634 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 YEATS4O95619 227 aa20.17■□□□□ 0.82
CACNA1A-225ENST00000636389 CCDC196A0A1B0GTZ2 297 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 V9GYY5 206 aaPredicted RBP20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 PLS1Q14651 629 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 ATP2B3Q16720 1220 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 SLF2Q8IX21 1173 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 CNNM3Q8NE01 707 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 PPP6R1Q9UPN7 881 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 STXBP4Q6ZWJ1 553 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 CCDC194A0A1B0GVG4 234 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 PTCD1O75127 700 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 CATIPQ7Z7H3 387 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 AKAP2Q9Y2D5 859 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 FAM212AQ96EL1 285 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 TRMT1Q9NXH9 659 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 STX6O43752 255 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 GSTA5Q7RTV2 222 aa20.16■□□□□ 0.82
CACNA1A-225ENST00000636389 TMCO4Q5TGY1 634 aa20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 C8orf76Q96K31 380 aa20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 GTPBP4Q9BZE4 634 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 CEP112Q8N8E3 955 aa20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 PHAXQ9H814 394 aaKnown RBP20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 KIAA0753Q2KHM9 967 aa20.15■□□□□ 0.82
CACNA1A-225ENST00000636389 C6orf229H3BNL8 230 aa20.14■□□□□ 0.82
CACNA1A-225ENST00000636389 NOL3O60936 208 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 PPP1R9BQ96SB3 815 aa20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 CCDC83Q8IWF9 413 aa20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 IFIT1P09914 478 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 NUTM1Q86Y26 1132 aa20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 CCDC155Q8N6L0 562 aa20.14■□□□□ 0.81
CACNA1A-225ENST00000636389 PROCA1Q8NCQ7 364 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 EPSTI1Q96J88 318 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 ZSCAN31Q96LW9 406 aaPredicted RBP20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 GJC1P36383 396 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 ISM2Q6H9L7 571 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 PFDN4Q9NQP4 134 aa20.13■□□□□ 0.81
CACNA1A-225ENST00000636389 TMEM110-MUSTN1A8MSY1 372 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms