RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 PPP1R42Q7Z4L9 355 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 EXOC6BQ9Y2D4 811 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 NBPF6Q5VWK0 638 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 NBPF4Q96M43 638 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 IBTKQ9P2D0 1353 aaPredicted RBP5.48□□□□□ -1.53
SCN1A-210ENST00000635776 HMGB1P09429 215 aaKnown RBP5.48□□□□□ -1.53
SCN1A-210ENST00000635776 TOM1L2Q6ZVM7 507 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 UBR1Q8IWV7 1749 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 F6X3S4 739 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 ESYT1Q9BSJ8 1104 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 AKAP2Q9Y2D5 859 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 FBXO3Q9UK99 471 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 SMC3Q9UQE7 1217 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 CYP46A1Q9Y6A2 500 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 USP19O94966 1318 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 GRM8O00222 908 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 MPRIPQ6WCQ1 1025 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 CFAP65Q6ZU64 1925 aaKnown RBP5.48□□□□□ -1.53
SCN1A-210ENST00000635776 STARD3NLO95772 234 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 CEMIPQ8WUJ3 1361 aa5.48□□□□□ -1.53
SCN1A-210ENST00000635776 ATP10DQ9P241 1426 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 ERBB3P21860 1342 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 KIF6Q6ZMV9 814 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 NECTIN2Q92692 538 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 ITSN1Q15811 1721 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 SPRYD3Q8NCJ5 442 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 MIS18AQ9NYP9 233 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 ZC3H6P61129 1189 aaKnown RBP5.47□□□□□ -1.53
SCN1A-210ENST00000635776 ZRSR1Q15695 479 aaKnown RBP5.47□□□□□ -1.53
SCN1A-210ENST00000635776 CPLX2Q6PUV4 134 aaKnown RBP5.47□□□□□ -1.53
SCN1A-210ENST00000635776 FAM184AQ8NB25 1140 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 FSD1Q9BTV5 496 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 USP26Q9BXU7 913 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 CTNNA3Q9UI47 895 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 ERVV-2B6SEH9 535 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 SLC52A2Q9HAB3 445 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 KLHL40Q2TBA0 621 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 CCDC34Q96HJ3 373 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 RAB3GAP1Q15042 981 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 ANKRD13DQ6ZTN6 518 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 CHPF2Q9P2E5 772 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 MAP3K2Q9Y2U5 619 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 GOLGA6L6A8MZA4 724 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 ZNF790Q6PG37 636 aa5.47□□□□□ -1.53
SCN1A-210ENST00000635776 NRKQ7Z2Y5 1582 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 GIGYF1O75420 1035 aaPredicted RBP5.46□□□□□ -1.54
SCN1A-210ENST00000635776 CCDC158Q5M9N0 1113 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 ZCRB1Q8TBF4 217 aaKnown RBP5.46□□□□□ -1.54
SCN1A-210ENST00000635776 TMEM94Q12767 1356 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 BEND3Q5T5X7 828 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 AACSQ86V21 672 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 SKAP1Q86WV1 359 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 TM6SF1Q9BZW5 370 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 USHBP1Q8N6Y0 703 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 USP44Q9H0E7 712 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 NRDCO43847 1150 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 PLEKHG5O94827 1062 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 TPM3P06753 285 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 AIMP1Q12904 312 aaKnown RBP5.46□□□□□ -1.54
SCN1A-210ENST00000635776 DHX16O60231 1041 aaKnown RBP5.46□□□□□ -1.54
SCN1A-210ENST00000635776 C1orf167Q5SNV9 1468 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 MSNP26038 577 aaKnown RBP5.46□□□□□ -1.54
SCN1A-210ENST00000635776 ORAI2Q96SN7 254 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.46□□□□□ -1.54
SCN1A-210ENST00000635776 LIMCH1Q9UPQ0 1083 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 CHMP3Q9Y3E7 222 aa5.46□□□□□ -1.54
SCN1A-210ENST00000635776 NRXN3Q9Y4C0 1643 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 CHMLP26374 656 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 DHX8Q14562 1220 aaKnown RBP5.45□□□□□ -1.54
SCN1A-210ENST00000635776 METTL22Q9BUU2 404 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-210ENST00000635776 GPR108Q9NPR9 543 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 CEP126Q9P2H0 1117 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 IL2RBP14784 551 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 PLBD2Q8NHP8 589 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 U3KPZ7 1027 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-210ENST00000635776 MON2Q7Z3U7 1717 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 SEC24BO95487 1268 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 PHKG2P15735 406 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 G2E3Q7L622 706 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 TMOD3Q9NYL9 352 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 ZFYP08048 801 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-210ENST00000635776 IL15P40933 162 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-210ENST00000635776 POLA2Q14181 598 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 KRT24Q2M2I5 525 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 FAM43AQ8N2R8 423 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 C3P01024 1663 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 IL1RAPL2Q9NP60 686 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 CWC25Q9NXE8 425 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-210ENST00000635776 RFX7Q2KHR2 1363 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 CCDC173Q0VFZ6 552 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 BLOC1S2Q6QNY1 142 aa5.45□□□□□ -1.54
SCN1A-210ENST00000635776 TNPO1Q92973 898 aaKnown RBP5.45□□□□□ -1.54
SCN1A-210ENST00000635776 AEBP2Q6ZN18 517 aaPredicted RBP5.45□□□□□ -1.54
SCN1A-210ENST00000635776 CCDC57Q2TAC2 916 aa5.44□□□□□ -1.54
SCN1A-210ENST00000635776 SIRT2Q8IXJ6 389 aa5.44□□□□□ -1.54
SCN1A-210ENST00000635776 PTMAP06454 111 aaKnown RBP5.44□□□□□ -1.54
SCN1A-210ENST00000635776 CCDC191Q8NCU4 936 aa5.44□□□□□ -1.54
SCN1A-210ENST00000635776 ATG3Q9NT62 314 aa5.44□□□□□ -1.54
SCN1A-210ENST00000635776 TRDNQ13061 729 aa5.44□□□□□ -1.54
SCN1A-210ENST00000635776 PDRG1Q9NUG6 133 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms