RNA–Protein interactions for RNA: ENST00000632629.1

NPHP3-ACAD11-202, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2

Gene NPHP3-ACAD11, Length 695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-202ENST00000632629 FIGNL1Q6PIW4 674 aa6.7□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 ZCCHC2Q9C0B9 1178 aaKnown RBP6.7□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 FHDC1Q9C0D6 1143 aaPredicted RBP6.7□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 PCDHGC4Q9Y5F7 938 aa6.7□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 APBA3O96018 575 aa6.69□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 FBXO45P0C2W1 286 aa6.69□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 XAGE2Q96GT9 111 aa6.69□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 AVENQ9NQS1 362 aaPredicted RBP6.69□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 DNAAF2Q9NVR5 837 aaKnown RBP6.69□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 SPDYE3A6NKU9 549 aa6.68□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 HYAL3O43820 417 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 PRRT3Q5FWE3 981 aa6.68□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 TRIM34Q9BYJ4 488 aa6.68□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 PRM3Q9NNZ6 103 aa6.68□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 HCN2Q9UL51 889 aa6.68□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 ZNF330Q9Y3S2 320 aaPredicted RBP6.68□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 FAM182BQ5T319 152 aa6.67□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 CD33P20138 364 aa6.66□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 PCBP4P57723 403 aaKnown RBP6.66□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 RHBDD1Q8TEB9 315 aa6.66□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 ATXN7O15265 892 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 MAPTP10636 758 aaKnown RBP6.65□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 TNP2Q05952 138 aa6.65□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 NLRP8Q86W28 1048 aa6.65□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 GJD4Q96KN9 370 aaPredicted RBP6.65□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 NDUFB9Q9Y6M9 179 aa6.65□□□□□ -1.34
NPHP3-ACAD11-202ENST00000632629 DCDC2BA2VCK2 349 aa6.64□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 FAM229AH3BQW9 127 aa6.64□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 TBC1D9Q6ZT07 1266 aa6.64□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 PPARGC1BQ86YN6 1023 aaKnown RBP6.64□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 H2AFB1P0C5Y9 115 aa6.63□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 H2AFB2P0C5Z0 115 aa6.63□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 ZNF468Q5VIY5 522 aaPredicted RBP6.63□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 NACC1Q96RE7 527 aa6.63□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 KRTAP4-7Q9BYR0 210 aa6.63□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 ELOA3CA0A087WX78 387 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 ELOA3DA6NLF2 546 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 MYCP01106 439 aaPredicted RBP6.62□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 ATP4AP20648 1035 aa6.62□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 PLA2G4AP47712 749 aa6.62□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 NR1H3Q13133 447 aa6.62□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 ELOA3BQ3SY89 546 aa6.62□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 ELOA3Q8NG57 546 aa6.62□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 PRR12Q9ULL5 1215 aa6.62□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 KHNYNO15037 678 aaKnown RBP6.61□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 ALAS2P22557 587 aa6.61□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 TRIM28Q13263 835 aaKnown RBP6.61□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 GRIK4Q16099 956 aa6.61□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 ESCO1Q5FWF5 840 aa6.61□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 MTMR14Q8NCE2 650 aa6.61□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 C1orf216Q8TAB5 229 aa6.61□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 CDCA7Q9BWT1 371 aaPredicted RBP6.61□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 COBLO75128 1261 aa6.6□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 COL9A3Q14050 684 aaPredicted RBP6.6□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 MCTP1Q6DN14 999 aa6.6□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 A0A1W2PNR3 127 aa6.59□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 STAU1O95793 577 aaKnown RBP6.59□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 TLR1Q15399 786 aa6.59□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 LCE1DQ5T752 114 aa6.59□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 AIDAQ96BJ3 306 aa6.59□□□□□ -1.35
NPHP3-ACAD11-202ENST00000632629 M0R082 166 aa6.58□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 ARSJQ5FYB0 599 aaPredicted RBP6.58□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 ZNF417Q8TAU3 575 aa6.58□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 CCDC85AQ96PX6 553 aaPredicted RBP6.58□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 ZNF587Q96SQ5 575 aaPredicted RBP6.58□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 MDFIQ99750 246 aa6.58□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 ETNK1Q9HBU6 452 aa6.58□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 MARK1Q9P0L2 795 aa6.57□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 C9orf172C9J069 976 aa6.56□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 PAX4O43316 350 aa6.56□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 GPR37L1O60883 481 aa6.56□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 FAM157BP0CG42 384 aa6.56□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 ADGRE1Q14246 886 aa6.56□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 SYT9Q86SS6 491 aa6.56□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 PRDM6Q9NQX0 595 aa6.56□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 STRN4Q9NRL3 753 aa6.56□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 YBX3P16989 372 aaKnown RBP eCLIP6.55□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 SOX11P35716 441 aa6.55□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 TXKP42681 527 aa6.55□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 MBTPS1Q14703 1052 aa6.55□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 WASHC4Q2M389 1173 aa6.55□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 C8orf86Q6ZUL3 223 aa6.55□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 NIFKQ9BYG3 293 aaKnown RBP6.55□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 COL17A1Q9UMD9 1497 aaPredicted RBP6.54□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 NID1P14543 1247 aa6.54□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 ELNP15502 786 aa6.54□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 EIF4G2P78344 907 aaKnown RBP eCLIP6.54□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 MICALL1Q8N3F8 863 aa6.54□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 SNRKQ9NRH2 765 aa6.54□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 STARD13Q9Y3M8 1113 aa6.54□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 ADARB2-AS1A8MUL3 147 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 EFSO43281 561 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 SIN3BO75182 1162 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 ALBP02768 609 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 PRKCSHP14314 528 aaPredicted RBP6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 SELPP16109 830 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 FLIIQ13045 1269 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 LAMC2Q13753 1193 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 TXNRD3Q86VQ6 643 aa6.53□□□□□ -1.36
NPHP3-ACAD11-202ENST00000632629 TP53INP1Q96A56 240 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms