RNA–Protein interactions for RNA: ENST00000627393.1

PCNP-208, Transcript of PEST proteolytic signal containing nuclear protein, humanhuman

TSL 2 BASIC

Gene PCNP, Length 136 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNP-208ENST00000627393 DCAF11Q8TEB1 546 aa4.89□□□□□ -1.63
PCNP-208ENST00000627393 PIGBQ92521 554 aa4.89□□□□□ -1.63
PCNP-208ENST00000627393 TAOK3Q9H2K8 898 aa4.89□□□□□ -1.63
PCNP-208ENST00000627393 CGNL1Q0VF96 1302 aa4.89□□□□□ -1.63
PCNP-208ENST00000627393 AFDNP55196 1824 aaKnown RBP4.88□□□□□ -1.63
PCNP-208ENST00000627393 CACNA1SQ13698 1873 aa4.88□□□□□ -1.63
PCNP-208ENST00000627393 LOC105371045A0A1W2PR82 267 aa4.88□□□□□ -1.63
PCNP-208ENST00000627393 POLRMTO00411 1230 aaKnown RBP4.88□□□□□ -1.63
PCNP-208ENST00000627393 RPS6KA4O75676 772 aa4.88□□□□□ -1.63
PCNP-208ENST00000627393 TATP17735 454 aaPredicted RBP4.88□□□□□ -1.63
PCNP-208ENST00000627393 AKAP4Q5JQC9 854 aa4.88□□□□□ -1.63
PCNP-208ENST00000627393 CST9Q5W186 159 aa4.88□□□□□ -1.63
PCNP-208ENST00000627393 BICDL1Q6ZP65 573 aa4.88□□□□□ -1.63
PCNP-208ENST00000627393 IP6K1Q92551 441 aa4.88□□□□□ -1.63
PCNP-208ENST00000627393 ZNF622Q969S3 477 aaKnown RBP eCLIP4.88□□□□□ -1.633e-27■■□□□ 11.6
PCNP-208ENST00000627393 MPHOSPH9Q99550 1183 aa4.88□□□□□ -1.63
PCNP-208ENST00000627393 ASAP1Q9ULH1 1129 aa4.88□□□□□ -1.63
PCNP-208ENST00000627393 KTN1Q86UP2 1357 aaKnown RBP4.88□□□□□ -1.63
PCNP-208ENST00000627393 SMG6Q86US8 1419 aaKnown RBP4.88□□□□□ -1.63
PCNP-208ENST00000627393 TRAF5O00463 557 aa4.87□□□□□ -1.63
PCNP-208ENST00000627393 TRPA1O75762 1119 aa4.87□□□□□ -1.63
PCNP-208ENST00000627393 NOGQ13253 232 aa4.87□□□□□ -1.63
PCNP-208ENST00000627393 PKN2Q16513 984 aaKnown RBP4.87□□□□□ -1.63
PCNP-208ENST00000627393 RC3H1Q5TC82 1133 aaKnown RBP4.87□□□□□ -1.63
PCNP-208ENST00000627393 SAPCD2Q86UD0 394 aa4.87□□□□□ -1.63
PCNP-208ENST00000627393 USHBP1Q8N6Y0 703 aa4.87□□□□□ -1.63
PCNP-208ENST00000627393 RBM42Q9BTD8 480 aaKnown RBP4.87□□□□□ -1.63
PCNP-208ENST00000627393 TMOD3Q9NYL9 352 aa4.87□□□□□ -1.63
PCNP-208ENST00000627393 SRP68Q9UHB9 627 aaKnown RBP4.87□□□□□ -1.63
PCNP-208ENST00000627393 RNF123Q5XPI4 1314 aa4.87□□□□□ -1.63
PCNP-208ENST00000627393 LTBP3Q9NS15 1303 aa4.87□□□□□ -1.63
PCNP-208ENST00000627393 USP31Q70CQ4 1352 aa4.87□□□□□ -1.63
PCNP-208ENST00000627393 COL5A3P25940 1745 aaPredicted RBP4.86□□□□□ -1.63
PCNP-208ENST00000627393 UNC80Q8N2C7 3258 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 MYH14Q7Z406 1995 aaKnown RBP4.86□□□□□ -1.63
PCNP-208ENST00000627393 CELF2O95319 508 aaKnown RBP4.86□□□□□ -1.63
PCNP-208ENST00000627393 LMOD1P29536 600 aaPredicted RBP4.86□□□□□ -1.63
PCNP-208ENST00000627393 TM4SF1P30408 202 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 AMPHP49418 695 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 NME9Q86XW9 330 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 HHIPL1Q96JK4 782 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 ZNF408Q9H9D4 720 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 SAGE1Q9NXZ1 904 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 HDAC9Q9UKV0 1011 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 ZNF541Q9H0D2 1346 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 USP42Q9H9J4 1324 aaKnown RBP4.86□□□□□ -1.63
PCNP-208ENST00000627393 CENPJQ9HC77 1338 aaPredicted RBP4.86□□□□□ -1.63
PCNP-208ENST00000627393 CD163L1Q9NR16 1453 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 MON2Q7Z3U7 1717 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 SCN11AQ9UI33 1791 aa4.86□□□□□ -1.63
PCNP-208ENST00000627393 CYP27B1O15528 508 aa4.85□□□□□ -1.63
PCNP-208ENST00000627393 ZPR1O75312 459 aa4.85□□□□□ -1.63
PCNP-208ENST00000627393 SYNE4Q8N205 404 aa4.85□□□□□ -1.63
PCNP-208ENST00000627393 ZIC5Q96T25 663 aa4.85□□□□□ -1.63
PCNP-208ENST00000627393 COL25A1Q9BXS0 654 aaPredicted RBP4.85□□□□□ -1.63
PCNP-208ENST00000627393 RNF186Q9NXI6 227 aa4.85□□□□□ -1.63
PCNP-208ENST00000627393 EVC2Q86UK5 1308 aa4.85□□□□□ -1.63
PCNP-208ENST00000627393 CNTNAP4Q9C0A0 1308 aa4.85□□□□□ -1.63
PCNP-208ENST00000627393 ZNF831Q5JPB2 1677 aa4.85□□□□□ -1.63
PCNP-208ENST00000627393 TRIOBPQ9H2D6 2365 aa4.85□□□□□ -1.63
PCNP-208ENST00000627393 PAPPA2Q9BXP8 1791 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 NRXN2Q9P2S2 1712 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 MAP3K19Q56UN5 1328 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 SERPINB2P05120 415 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 HOXC9P31274 260 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 SOGA3Q5TF21 947 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 NBPF6Q5VWK0 638 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 NBPF4Q96M43 638 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 STAC3Q96MF2 364 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 PRDM6Q9NQX0 595 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 ATG3Q9NT62 314 aa4.84□□□□□ -1.63
PCNP-208ENST00000627393 SLX4Q8IY92 1834 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 CENPFP49454 3210 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 INSRP06213 1382 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 KDRP35968 1356 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 POTEFA5A3E0 1075 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 CRKLP46109 303 aaKnown RBP4.83□□□□□ -1.64
PCNP-208ENST00000627393 HUNKP57058 714 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 KIF23Q02241 960 aaPredicted RBP4.83□□□□□ -1.64
PCNP-208ENST00000627393 USPL1Q5W0Q7 1092 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 FBXO46Q6PJ61 603 aaPredicted RBP4.83□□□□□ -1.64
PCNP-208ENST00000627393 CHRDL2Q6WN34 429 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 GPC2Q8N158 579 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 PDZRN3Q9UPQ7 1066 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 GJA3Q9Y6H8 435 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 ANKRD31Q8N7Z5 1873 aa4.83□□□□□ -1.64
PCNP-208ENST00000627393 COL11A2P13942 1736 aaPredicted RBP4.83□□□□□ -1.64
PCNP-208ENST00000627393 CARMIL3Q8ND23 1372 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 H0YGN5 161 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 COL9A1P20849 921 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 PDE6BP35913 854 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 EPS15P42566 896 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 NFIXQ14938 502 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 NKX1-1Q15270 411 aaPredicted RBP4.82□□□□□ -1.64
PCNP-208ENST00000627393 USP50Q70EL3 339 aaPredicted RBP4.82□□□□□ -1.64
PCNP-208ENST00000627393 CCDC24Q8N4L8 307 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 CNKSR1Q969H4 720 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 OTUD5Q96G74 571 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 SLC4A9Q96Q91 983 aa4.82□□□□□ -1.64
PCNP-208ENST00000627393 ZNF277Q9NRM2 450 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms