RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 SYT1P21579 422 aa19■□□□□ 0.63
NPHP4-211ENST00000622020 HSPA4P34932 840 aa19■□□□□ 0.63
NPHP4-211ENST00000622020 ANAPC15P60006 121 aa19■□□□□ 0.63
NPHP4-211ENST00000622020 CCDC83Q8IWF9 413 aa19■□□□□ 0.63
NPHP4-211ENST00000622020 CASTP20810 708 aaKnown RBP19■□□□□ 0.63
NPHP4-211ENST00000622020 CSPP1Q1MSJ5 1256 aa19■□□□□ 0.63
NPHP4-211ENST00000622020 RHPN1Q8TCX5 695 aa19■□□□□ 0.63
NPHP4-211ENST00000622020 SOS1Q07889 1333 aaPredicted RBP19■□□□□ 0.63
NPHP4-211ENST00000622020 TCHHQ07283 1943 aa19■□□□□ 0.63
NPHP4-211ENST00000622020 PRDM10Q9NQV6 1147 aa19■□□□□ 0.63
NPHP4-211ENST00000622020 RUFY3Q7L099 469 aa18.99■□□□□ 0.63
NPHP4-211ENST00000622020 SMC3Q9UQE7 1217 aa18.99■□□□□ 0.63
NPHP4-211ENST00000622020 VPS37CA5D8V6 355 aaPredicted RBP18.98■□□□□ 0.63
NPHP4-211ENST00000622020 SPC24Q8NBT2 197 aa18.98■□□□□ 0.63
NPHP4-211ENST00000622020 STAP2Q9UGK3 403 aa18.98■□□□□ 0.63
NPHP4-211ENST00000622020 STX6O43752 255 aa18.98■□□□□ 0.63
NPHP4-211ENST00000622020 DNM1Q05193 864 aaKnown RBP18.98■□□□□ 0.63
NPHP4-211ENST00000622020 TAF7Q15545 349 aaPredicted RBP18.98■□□□□ 0.63
NPHP4-211ENST00000622020 LTKP29376 864 aa18.98■□□□□ 0.63
NPHP4-211ENST00000622020 SASS6Q6UVJ0 657 aa18.98■□□□□ 0.63
NPHP4-211ENST00000622020 NECAB1Q8N987 351 aa18.98■□□□□ 0.63
NPHP4-211ENST00000622020 PHF14O94880 888 aa18.97■□□□□ 0.63
NPHP4-211ENST00000622020 ZSCAN22P10073 491 aaPredicted RBP18.97■□□□□ 0.63
NPHP4-211ENST00000622020 ADCK5Q3MIX3 580 aa18.97■□□□□ 0.63
NPHP4-211ENST00000622020 FAM173BQ6P4H8 233 aa18.97■□□□□ 0.63
NPHP4-211ENST00000622020 FERMT3Q86UX7 667 aa18.97■□□□□ 0.63
NPHP4-211ENST00000622020 TCEANC2Q96MN5 208 aa18.97■□□□□ 0.63
NPHP4-211ENST00000622020 RPAP1Q9BWH6 1393 aaPredicted RBP18.97■□□□□ 0.63
NPHP4-211ENST00000622020 SGSM2O43147 1006 aa18.97■□□□□ 0.63
NPHP4-211ENST00000622020 PI4K2BQ8TCG2 481 aa18.97■□□□□ 0.63
NPHP4-211ENST00000622020 CEBPAP49715 358 aaPredicted RBP18.96■□□□□ 0.63
NPHP4-211ENST00000622020 PRPF40BQ6NWY9 871 aaKnown RBP18.96■□□□□ 0.63
NPHP4-211ENST00000622020 USP6P35125 1406 aa18.96■□□□□ 0.63
NPHP4-211ENST00000622020 PI4KAP2A4QPH2 592 aa18.96■□□□□ 0.63
NPHP4-211ENST00000622020 KCNQ3O43525 872 aa18.96■□□□□ 0.63
NPHP4-211ENST00000622020 HDGFP51858 240 aaKnown RBP18.96■□□□□ 0.63
NPHP4-211ENST00000622020 PI4KAP1Q8N8J0 262 aa18.96■□□□□ 0.63
NPHP4-211ENST00000622020 OVOS2A0A0J9YW53 1432 aa18.96■□□□□ 0.63
NPHP4-211ENST00000622020 OVOS2Q6IE36 1432 aa18.96■□□□□ 0.63
NPHP4-211ENST00000622020 PTH1RQ03431 593 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 COL9A3Q14050 684 aaPredicted RBP18.95■□□□□ 0.62
NPHP4-211ENST00000622020 CCDC183Q5T5S1 534 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 MCM5P33992 734 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 JAKMIP1Q96N16 626 aaKnown RBP18.95■□□□□ 0.62
NPHP4-211ENST00000622020 PA2G4Q9UQ80 394 aaKnown RBP18.95■□□□□ 0.62
NPHP4-211ENST00000622020 PEAK1Q9H792 1746 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 PLEKHG3A1L390 1219 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 GJB2P29033 226 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 CAMK4Q16566 473 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 SSH3Q8TE77 659 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 BCL11BQ9C0K0 894 aaPredicted RBP18.95■□□□□ 0.62
NPHP4-211ENST00000622020 CHPF2Q9P2E5 772 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 LIMCH1Q9UPQ0 1083 aa18.95■□□□□ 0.62
NPHP4-211ENST00000622020 CEP170BQ9Y4F5 1589 aaPredicted RBP18.94■□□□□ 0.62
NPHP4-211ENST00000622020 NOLC1Q14978 699 aaKnown RBP eCLIP18.94■□□□□ 0.622e-7■■■■■ 29.2
NPHP4-211ENST00000622020 CNTROBQ8N137 903 aa18.94■□□□□ 0.62
NPHP4-211ENST00000622020 LSG1Q9H089 658 aaKnown RBP18.94■□□□□ 0.62
NPHP4-211ENST00000622020 DIAPH3Q9NSV4 1193 aa18.94■□□□□ 0.62
NPHP4-211ENST00000622020 RAD50Q92878 1312 aa18.94■□□□□ 0.62
NPHP4-211ENST00000622020 TSPOAP1O95153 1857 aa18.94■□□□□ 0.62
NPHP4-211ENST00000622020 TERF1P54274 439 aa18.94■□□□□ 0.62
NPHP4-211ENST00000622020 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.93■□□□□ 0.62
NPHP4-211ENST00000622020 RBM33Q96EV2 1170 aaKnown RBP18.93■□□□□ 0.62
NPHP4-211ENST00000622020 LGR6Q9HBX8 967 aa18.93■□□□□ 0.62
NPHP4-211ENST00000622020 C3P01024 1663 aa18.93■□□□□ 0.62
NPHP4-211ENST00000622020 FLT4P35916 1363 aa18.93■□□□□ 0.62
NPHP4-211ENST00000622020 F13A1P00488 732 aa18.93■□□□□ 0.62
NPHP4-211ENST00000622020 KCNJ4P48050 445 aa18.92■□□□□ 0.62
NPHP4-211ENST00000622020 DYNC1I1O14576 645 aa18.92■□□□□ 0.62
NPHP4-211ENST00000622020 AP5Z1O43299 807 aa18.92■□□□□ 0.62
NPHP4-211ENST00000622020 TTC14Q96N46 770 aa18.92■□□□□ 0.62
NPHP4-211ENST00000622020 AMOTL2Q9Y2J4 779 aa18.92■□□□□ 0.62
NPHP4-211ENST00000622020 ARHGEF10O15013 1369 aa18.92■□□□□ 0.62
NPHP4-211ENST00000622020 MON2Q7Z3U7 1717 aa18.91■□□□□ 0.62
NPHP4-211ENST00000622020 NRXN3Q9Y4C0 1643 aa18.91■□□□□ 0.62
NPHP4-211ENST00000622020 IGSF1Q8N6C5 1336 aa18.91■□□□□ 0.62
NPHP4-211ENST00000622020 KIF1BPQ96EK5 621 aa18.91■□□□□ 0.62
NPHP4-211ENST00000622020 UBE2HP62256 183 aa18.91■□□□□ 0.62
NPHP4-211ENST00000622020 ABTB2Q8N961 1025 aa18.91■□□□□ 0.62
NPHP4-211ENST00000622020 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.91■□□□□ 0.62
NPHP4-211ENST00000622020 SETD1AO15047 1707 aaKnown RBP18.91■□□□□ 0.62
NPHP4-211ENST00000622020 PDRG1Q9NUG6 133 aa18.9■□□□□ 0.62
NPHP4-211ENST00000622020 HOXC9P31274 260 aa18.9■□□□□ 0.62
NPHP4-211ENST00000622020 SBNO1A3KN83 1393 aa18.89■□□□□ 0.61
NPHP4-211ENST00000622020 HYPKQ9NX55 129 aa18.89■□□□□ 0.61
NPHP4-211ENST00000622020 ITSN1Q15811 1721 aa18.89■□□□□ 0.61
NPHP4-211ENST00000622020 STK3Q13188 491 aa18.89■□□□□ 0.61
NPHP4-211ENST00000622020 KDM4AO75164 1064 aa18.88■□□□□ 0.61
NPHP4-211ENST00000622020 PIBF1Q8WXW3 757 aa18.88■□□□□ 0.61
NPHP4-211ENST00000622020 CKAP2LQ8IYA6 745 aa18.88■□□□□ 0.61
NPHP4-211ENST00000622020 FAM184AQ8NB25 1140 aa18.88■□□□□ 0.61
NPHP4-211ENST00000622020 TFIP11Q9UBB9 837 aaKnown RBP18.88■□□□□ 0.61
NPHP4-211ENST00000622020 SSH2Q76I76 1423 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 RAB11FIP3O75154 756 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 ME3Q16798 604 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 CWF19L2Q2TBE0 894 aaKnown RBP18.87■□□□□ 0.61
NPHP4-211ENST00000622020 DNAAF4Q8WXU2 420 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 FAM227BQ96M60 508 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 SIL1Q9H173 461 aa18.87■□□□□ 0.61
NPHP4-211ENST00000622020 USP31Q70CQ4 1352 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms