RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 USP16Q9Y5T5 823 aa24.17■■□□□ 1.46
CIRBP-245ENST00000621399 TJP1Q07157 1748 aa24.17■■□□□ 1.46
CIRBP-245ENST00000621399 KDM3BQ7LBC6 1761 aa24.16■■□□□ 1.46
CIRBP-245ENST00000621399 RPS6KA4O75676 772 aa24.16■■□□□ 1.46
CIRBP-245ENST00000621399 SMIM5Q71RC9 77 aa24.16■■□□□ 1.46
CIRBP-245ENST00000621399 CICQ96RK0 1608 aaPredicted RBP24.15■■□□□ 1.46
CIRBP-245ENST00000621399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.15■■□□□ 1.46
CIRBP-245ENST00000621399 SSFA2P28290 1259 aa24.15■■□□□ 1.46
CIRBP-245ENST00000621399 AMIGO3Q86WK7 504 aa24.15■■□□□ 1.46
CIRBP-245ENST00000621399 COL23A1Q86Y22 540 aaPredicted RBP24.15■■□□□ 1.46
CIRBP-245ENST00000621399 COL5A3P25940 1745 aaPredicted RBP24.14■■□□□ 1.45
CIRBP-245ENST00000621399 TRAPPC3LQ5T215 181 aa24.14■■□□□ 1.45
CIRBP-245ENST00000621399 CANXP27824 592 aaKnown RBP24.13■■□□□ 1.45
CIRBP-245ENST00000621399 ZBTB1Q9Y2K1 713 aa24.13■■□□□ 1.45
CIRBP-245ENST00000621399 A1BGP04217 495 aa24.12■■□□□ 1.45
CIRBP-245ENST00000621399 KRT24Q2M2I5 525 aa24.12■■□□□ 1.45
CIRBP-245ENST00000621399 TSR2Q969E8 191 aaKnown RBP24.12■■□□□ 1.45
CIRBP-245ENST00000621399 ZNF521Q96K83 1311 aa24.11■■□□□ 1.45
CIRBP-245ENST00000621399 ADRA2BP18089 450 aa24.11■■□□□ 1.45
CIRBP-245ENST00000621399 ARHGEF1Q92888 912 aaKnown RBP24.1■■□□□ 1.45
CIRBP-245ENST00000621399 ZBTB7AO95365 584 aa24.09■■□□□ 1.45
CIRBP-245ENST00000621399 SLC16A10Q8TF71 515 aa24.09■■□□□ 1.45
CIRBP-245ENST00000621399 SOS1Q07889 1333 aaPredicted RBP24.09■■□□□ 1.45
CIRBP-245ENST00000621399 EIF2S2P20042 333 aaKnown RBP24.08■■□□□ 1.45
CIRBP-245ENST00000621399 RFC4P35249 363 aa24.08■■□□□ 1.45
CIRBP-245ENST00000621399 HNRNPUQ00839 825 aaKnown RBP eCLIP24.08■■□□□ 1.45
CIRBP-245ENST00000621399 MYH16Q9H6N6 1097 aa24.08■■□□□ 1.45
CIRBP-245ENST00000621399 SPINK5Q9NQ38 1064 aaPredicted RBP24.08■■□□□ 1.45
CIRBP-245ENST00000621399 ZNF330Q9Y3S2 320 aaPredicted RBP24.08■■□□□ 1.45
CIRBP-245ENST00000621399 IL6STP40189 918 aaPredicted RBP24.07■■□□□ 1.44
CIRBP-245ENST00000621399 PIP4K2AP48426 406 aaPredicted RBP24.07■■□□□ 1.44
CIRBP-245ENST00000621399 GOLGA2Q08379 1002 aa24.07■■□□□ 1.44
CIRBP-245ENST00000621399 DUSP27Q5VZP5 1158 aa24.07■■□□□ 1.44
CIRBP-245ENST00000621399 NPM2Q86SE8 214 aaKnown RBP24.07■■□□□ 1.44
CIRBP-245ENST00000621399 MYH14Q7Z406 1995 aaKnown RBP24.07■■□□□ 1.44
CIRBP-245ENST00000621399 FANCIQ9NVI1 1328 aa24.07■■□□□ 1.44
CIRBP-245ENST00000621399 TUBGCP6Q96RT7 1819 aa24.06■■□□□ 1.44
CIRBP-245ENST00000621399 ELL2O00472 640 aaPredicted RBP24.06■■□□□ 1.44
CIRBP-245ENST00000621399 EIF5P55010 431 aaKnown RBP24.06■■□□□ 1.44
CIRBP-245ENST00000621399 MTFR1LQ9H019 292 aa24.06■■□□□ 1.44
CIRBP-245ENST00000621399 ATF5Q9Y2D1 282 aaPredicted RBP24.06■■□□□ 1.44
CIRBP-245ENST00000621399 QSER1Q2KHR3 1735 aa24.06■■□□□ 1.44
CIRBP-245ENST00000621399 UBR3Q6ZT12 1888 aa24.06■■□□□ 1.44
CIRBP-245ENST00000621399 NBPF26B4DH59 902 aa24.05■■□□□ 1.44
CIRBP-245ENST00000621399 HOXB7P09629 217 aa24.05■■□□□ 1.44
CIRBP-245ENST00000621399 NBPF10Q6P3W6 841 aaKnown RBP24.05■■□□□ 1.44
CIRBP-245ENST00000621399 NBPF15Q8N660 670 aa24.05■■□□□ 1.44
CIRBP-245ENST00000621399 C8orf58Q8NAV2 365 aa24.05■■□□□ 1.44
CIRBP-245ENST00000621399 NECTIN2Q92692 538 aa24.05■■□□□ 1.44
CIRBP-245ENST00000621399 COL15A1P39059 1388 aa24.04■■□□□ 1.44
CIRBP-245ENST00000621399 CASZ1Q86V15 1759 aa24.04■■□□□ 1.44
CIRBP-245ENST00000621399 A0A087WZG4 1122 aa24.04■■□□□ 1.44
CIRBP-245ENST00000621399 SPON1Q9HCB6 807 aa24.04■■□□□ 1.44
CIRBP-245ENST00000621399 HDGFL1Q5TGJ6 251 aa24.03■■□□□ 1.44
CIRBP-245ENST00000621399 ARXQ96QS3 562 aa24.03■■□□□ 1.44
CIRBP-245ENST00000621399 E9PSI1 815 aa24.02■■□□□ 1.44
CIRBP-245ENST00000621399 ZPR1O75312 459 aa24.02■■□□□ 1.44
CIRBP-245ENST00000621399 MYL6BP14649 208 aa24.02■■□□□ 1.44
CIRBP-245ENST00000621399 ERBB4Q15303 1308 aa24.02■■□□□ 1.44
CIRBP-245ENST00000621399 MSL1Q68DK7 614 aa24.01■■□□□ 1.43
CIRBP-245ENST00000621399 TSPYL6Q8N831 410 aa24.01■■□□□ 1.43
CIRBP-245ENST00000621399 SRP68Q9UHB9 627 aaKnown RBP24.01■■□□□ 1.43
CIRBP-245ENST00000621399 EXOSC9Q06265 439 aaKnown RBP24■■□□□ 1.43
CIRBP-245ENST00000621399 CDCA7LQ96GN5 454 aa24■■□□□ 1.43
CIRBP-245ENST00000621399 NARFQ9UHQ1 456 aa24■■□□□ 1.43
CIRBP-245ENST00000621399 TBC1D2BQ9UPU7 963 aa24■■□□□ 1.43
CIRBP-245ENST00000621399 USP42Q9H9J4 1324 aaKnown RBP24■■□□□ 1.43
CIRBP-245ENST00000621399 LAMB4A4D0S4 1761 aa24■■□□□ 1.43
CIRBP-245ENST00000621399 SLFN5Q08AF3 891 aa23.99■■□□□ 1.43
CIRBP-245ENST00000621399 TWISTNBQ3B726 338 aaPredicted RBP23.99■■□□□ 1.43
CIRBP-245ENST00000621399 USPL1Q5W0Q7 1092 aa23.99■■□□□ 1.43
CIRBP-245ENST00000621399 CHMP4AQ9BY43 222 aa23.99■■□□□ 1.43
CIRBP-245ENST00000621399 GYS1P13807 737 aa23.98■■□□□ 1.43
CIRBP-245ENST00000621399 PDIA6Q15084 440 aa23.98■■□□□ 1.43
CIRBP-245ENST00000621399 DZIP3Q86Y13 1208 aaKnown RBP23.98■■□□□ 1.43
CIRBP-245ENST00000621399 LRP5O75197 1615 aa23.98■■□□□ 1.43
CIRBP-245ENST00000621399 POLD1P28340 1107 aa23.97■■□□□ 1.43
CIRBP-245ENST00000621399 NLGN1Q8N2Q7 840 aa23.97■■□□□ 1.43
CIRBP-245ENST00000621399 CHPF2Q9P2E5 772 aa23.97■■□□□ 1.43
CIRBP-245ENST00000621399 ANXA1P04083 346 aa23.96■■□□□ 1.43
CIRBP-245ENST00000621399 PTGER2P43116 358 aa23.96■■□□□ 1.43
CIRBP-245ENST00000621399 PROSER3Q2NL68 480 aa23.96■■□□□ 1.43
CIRBP-245ENST00000621399 DDX21Q9NR30 783 aaKnown RBP eCLIP23.96■■□□□ 1.43
CIRBP-245ENST00000621399 DBF4Q9UBU7 674 aaPredicted RBP23.96■■□□□ 1.43
CIRBP-245ENST00000621399 CCDC30Q5VVM6 783 aa23.95■■□□□ 1.42
CIRBP-245ENST00000621399 VAMP4O75379 141 aa23.93■■□□□ 1.42
CIRBP-245ENST00000621399 FKBP8Q14318 412 aa23.93■■□□□ 1.42
CIRBP-245ENST00000621399 LRP10Q7Z4F1 713 aa23.93■■□□□ 1.42
CIRBP-245ENST00000621399 SGIP1Q9BQI5 828 aa23.93■■□□□ 1.42
CIRBP-245ENST00000621399 CAMTA2O94983 1202 aa23.92■■□□□ 1.42
CIRBP-245ENST00000621399 KIF6Q6ZMV9 814 aa23.92■■□□□ 1.42
CIRBP-245ENST00000621399 TRMT2AQ8IZ69 625 aaKnown RBP23.92■■□□□ 1.42
CIRBP-245ENST00000621399 BCL2L12Q9HB09 334 aa23.92■■□□□ 1.42
CIRBP-245ENST00000621399 HYPKQ9NX55 129 aa23.92■■□□□ 1.42
CIRBP-245ENST00000621399 PPP1R1BQ9UD71 204 aaPredicted RBP23.92■■□□□ 1.42
CIRBP-245ENST00000621399 C4AP0C0L4 1744 aa23.92■■□□□ 1.42
CIRBP-245ENST00000621399 ZBED9Q6R2W3 1325 aa23.91■■□□□ 1.42
CIRBP-245ENST00000621399 MMP10P09238 476 aa23.91■■□□□ 1.42
CIRBP-245ENST00000621399 AIMP1Q12904 312 aaKnown RBP23.91■■□□□ 1.42
CIRBP-245ENST00000621399 TTLL7Q6ZT98 887 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms