RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 TSPY26PQ9H489 355 aa21.16■□□□□ 0.98
DDX1-207ENST00000617198 CCDC39Q9UFE4 941 aa21.16■□□□□ 0.98
DDX1-207ENST00000617198 DIP2AQ14689 1571 aa21.16■□□□□ 0.98
DDX1-207ENST00000617198 NWD1Q149M9 1564 aa21.16■□□□□ 0.98
DDX1-207ENST00000617198 NUTM1Q86Y26 1132 aa21.16■□□□□ 0.98
DDX1-207ENST00000617198 HDGFL1Q5TGJ6 251 aa21.15■□□□□ 0.98
DDX1-207ENST00000617198 RNF214Q8ND24 703 aa21.15■□□□□ 0.98
DDX1-207ENST00000617198 PLEKHG5O94827 1062 aa21.15■□□□□ 0.98
DDX1-207ENST00000617198 POLA2Q14181 598 aa21.15■□□□□ 0.98
DDX1-207ENST00000617198 PPP1R42Q7Z4L9 355 aa21.15■□□□□ 0.98
DDX1-207ENST00000617198 EID1Q9Y6B2 187 aa21.15■□□□□ 0.98
DDX1-207ENST00000617198 SURF6O75683 361 aaKnown RBP21.14■□□□□ 0.97
DDX1-207ENST00000617198 PHF14O94880 888 aa21.14■□□□□ 0.97
DDX1-207ENST00000617198 RAD50Q92878 1312 aa21.13■□□□□ 0.97
DDX1-207ENST00000617198 PI4K2BQ8TCG2 481 aa21.13■□□□□ 0.97
DDX1-207ENST00000617198 RHPN1Q8TCX5 695 aa21.13■□□□□ 0.97
DDX1-207ENST00000617198 PHAXQ9H814 394 aaKnown RBP21.13■□□□□ 0.97
DDX1-207ENST00000617198 XPCQ01831 940 aaPredicted RBP21.13■□□□□ 0.97
DDX1-207ENST00000617198 SGSM2O43147 1006 aa21.12■□□□□ 0.97
DDX1-207ENST00000617198 USP48Q86UV5 1035 aa21.12■□□□□ 0.97
DDX1-207ENST00000617198 KIF1BPQ96EK5 621 aa21.12■□□□□ 0.97
DDX1-207ENST00000617198 GDPD2Q9HCC8 539 aa21.12■□□□□ 0.97
DDX1-207ENST00000617198 R3HCC1Q9Y3T6 440 aaKnown RBP21.12■□□□□ 0.97
DDX1-207ENST00000617198 GADD45BO75293 160 aaPredicted RBP21.11■□□□□ 0.97
DDX1-207ENST00000617198 MAP4K4O95819 1239 aaPredicted RBP21.11■□□□□ 0.97
DDX1-207ENST00000617198 FOXD4L6Q3SYB3 417 aaPredicted RBP21.11■□□□□ 0.97
DDX1-207ENST00000617198 FOXD4L3Q6VB84 417 aaPredicted RBP21.11■□□□□ 0.97
DDX1-207ENST00000617198 TBX22Q9Y458 520 aa21.11■□□□□ 0.97
DDX1-207ENST00000617198 CSPP1Q1MSJ5 1256 aa21.11■□□□□ 0.97
DDX1-207ENST00000617198 SRGAP3O43295 1099 aa21.1■□□□□ 0.97
DDX1-207ENST00000617198 CNTROBQ8N137 903 aa21.1■□□□□ 0.97
DDX1-207ENST00000617198 TMEM87AQ8NBN3 555 aa21.1■□□□□ 0.97
DDX1-207ENST00000617198 SNX14Q9Y5W7 946 aa21.1■□□□□ 0.97
DDX1-207ENST00000617198 RPAP1Q9BWH6 1393 aaPredicted RBP21.1■□□□□ 0.97
DDX1-207ENST00000617198 MARF1Q9Y4F3 1742 aaKnown RBP21.1■□□□□ 0.97
DDX1-207ENST00000617198 TTC14Q96N46 770 aa21.09■□□□□ 0.97
DDX1-207ENST00000617198 PDCL3Q9H2J4 239 aa21.09■□□□□ 0.97
DDX1-207ENST00000617198 LSG1Q9H089 658 aaKnown RBP21.09■□□□□ 0.97
DDX1-207ENST00000617198 NUTM2GQ5VZR2 741 aa21.08■□□□□ 0.97
DDX1-207ENST00000617198 LTV1Q96GA3 475 aaPredicted RBP21.08■□□□□ 0.97
DDX1-207ENST00000617198 USP54Q70EL1 1684 aa21.07■□□□□ 0.96
DDX1-207ENST00000617198 ANKARQ7Z5J8 1434 aa21.07■□□□□ 0.96
DDX1-207ENST00000617198 TCHHQ07283 1943 aa21.07■□□□□ 0.96
DDX1-207ENST00000617198 NBPF7P0C2Y1 421 aaPredicted RBP21.07■□□□□ 0.96
DDX1-207ENST00000617198 FAM184AQ8NB25 1140 aa21.07■□□□□ 0.96
DDX1-207ENST00000617198 SLIT1O75093 1534 aa21.07■□□□□ 0.96
DDX1-207ENST00000617198 CEMIPQ8WUJ3 1361 aa21.06■□□□□ 0.96
DDX1-207ENST00000617198 AK2P54819 239 aa21.06■□□□□ 0.96
DDX1-207ENST00000617198 HSP90AB4PQ58FF6 505 aa21.06■□□□□ 0.96
DDX1-207ENST00000617198 LIMCH1Q9UPQ0 1083 aa21.06■□□□□ 0.96
DDX1-207ENST00000617198 ZSCAN22P10073 491 aaPredicted RBP21.06■□□□□ 0.96
DDX1-207ENST00000617198 EIF2S2P20042 333 aaKnown RBP21.06■□□□□ 0.96
DDX1-207ENST00000617198 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.06■□□□□ 0.96
DDX1-207ENST00000617198 ARHGAP23Q9P227 1491 aa21.05■□□□□ 0.96
DDX1-207ENST00000617198 PTMAP06454 111 aaKnown RBP21.05■□□□□ 0.96
DDX1-207ENST00000617198 UVSSAQ2YD98 709 aa21.05■□□□□ 0.96
DDX1-207ENST00000617198 CCDC183Q5T5S1 534 aa21.05■□□□□ 0.96
DDX1-207ENST00000617198 BEND3Q5T5X7 828 aa21.05■□□□□ 0.96
DDX1-207ENST00000617198 RASEFQ8IZ41 740 aa21.05■□□□□ 0.96
DDX1-207ENST00000617198 ABTB2Q8N961 1025 aa21.05■□□□□ 0.96
DDX1-207ENST00000617198 USP42Q9H9J4 1324 aaKnown RBP21.05■□□□□ 0.96
DDX1-207ENST00000617198 CRYBG1Q9Y4K1 1723 aa21.05■□□□□ 0.96
DDX1-207ENST00000617198 KIF13AQ9H1H9 1805 aa21.05■□□□□ 0.96
DDX1-207ENST00000617198 HOXB7P09629 217 aa21.04■□□□□ 0.96
DDX1-207ENST00000617198 RUFY3Q7L099 469 aa21.04■□□□□ 0.96
DDX1-207ENST00000617198 DNAAF4Q8WXU2 420 aa21.04■□□□□ 0.96
DDX1-207ENST00000617198 CHMP4AQ9BY43 222 aa21.04■□□□□ 0.96
DDX1-207ENST00000617198 STX6O43752 255 aa21.04■□□□□ 0.96
DDX1-207ENST00000617198 EIF4A1P60842 406 aaKnown RBP21.04■□□□□ 0.96
DDX1-207ENST00000617198 CWC27Q6UX04 472 aaKnown RBP21.04■□□□□ 0.96
DDX1-207ENST00000617198 USHBP1Q8N6Y0 703 aa21.04■□□□□ 0.96
DDX1-207ENST00000617198 CNPY2Q9Y2B0 182 aa21.04■□□□□ 0.96
DDX1-207ENST00000617198 CHPF2Q9P2E5 772 aa21.03■□□□□ 0.96
DDX1-207ENST00000617198 TTC41PQ6P2S7 1318 aa21.03■□□□□ 0.96
DDX1-207ENST00000617198 PI4KAP2A4QPH2 592 aa21.03■□□□□ 0.96
DDX1-207ENST00000617198 LETM1O95202 739 aaPredicted RBP21.03■□□□□ 0.96
DDX1-207ENST00000617198 SYT1P21579 422 aa21.03■□□□□ 0.96
DDX1-207ENST00000617198 CEBPAP49715 358 aaPredicted RBP21.03■□□□□ 0.96
DDX1-207ENST00000617198 PI4KAP1Q8N8J0 262 aa21.03■□□□□ 0.96
DDX1-207ENST00000617198 MED1Q15648 1581 aaPredicted RBP21.02■□□□□ 0.96
DDX1-207ENST00000617198 GLRX3O76003 335 aaKnown RBP21.02■□□□□ 0.96
DDX1-207ENST00000617198 SMC3Q9UQE7 1217 aa21.02■□□□□ 0.96
DDX1-207ENST00000617198 UQCRHLA0A096LP55 91 aa21.02■□□□□ 0.95
DDX1-207ENST00000617198 UQCRHP07919 91 aa21.02■□□□□ 0.95
DDX1-207ENST00000617198 UBE2HP62256 183 aa21.02■□□□□ 0.95
DDX1-207ENST00000617198 SPG7Q9UQ90 795 aa21.02■□□□□ 0.95
DDX1-207ENST00000617198 ATP6V1DQ9Y5K8 247 aa21.02■□□□□ 0.95
DDX1-207ENST00000617198 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.01■□□□□ 0.95
DDX1-207ENST00000617198 KDM3BQ7LBC6 1761 aa21.01■□□□□ 0.95
DDX1-207ENST00000617198 F13A1P00488 732 aa21.01■□□□□ 0.95
DDX1-207ENST00000617198 RUFY2Q8WXA3 655 aa21.01■□□□□ 0.95
DDX1-207ENST00000617198 DIAPH3Q9NSV4 1193 aa21.01■□□□□ 0.95
DDX1-207ENST00000617198 CASTP20810 708 aaKnown RBP21■□□□□ 0.95
DDX1-207ENST00000617198 KIAA2012Q0VF49 1180 aa21■□□□□ 0.95
DDX1-207ENST00000617198 OS9Q13438 667 aaPredicted RBP21■□□□□ 0.95
DDX1-207ENST00000617198 LARP6Q9BRS8 491 aaKnown RBP21■□□□□ 0.95
DDX1-207ENST00000617198 LGR6Q9HBX8 967 aa20.99■□□□□ 0.95
DDX1-207ENST00000617198 VSIG10Q8N0Z9 540 aa20.99■□□□□ 0.95
DDX1-207ENST00000617198 CLASRPQ8N2M8 674 aaKnown RBP20.99■□□□□ 0.95
DDX1-207ENST00000617198 HYPKQ9NX55 129 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms