RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 SSBP05455 408 aaKnown RBP eCLIP12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 ZSCAN22P10073 491 aaPredicted RBP12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 ARFGAP3Q9NP61 516 aa12.37□□□□□ -0.43
CLTCL1-209ENST00000617103 SKILP12757 684 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 IBSPP21815 317 aaPredicted RBP12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 GUCY1B3Q02153 619 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 TXNDC2Q86VQ3 553 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 CPLX3Q8WVH0 158 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 RTEL1-TNFRSF6BF6WH68 1400 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 MYL6BP14649 208 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 TATP17735 454 aaPredicted RBP12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 PRIM1P49642 420 aaKnown RBP12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 NUP88Q99567 741 aaPredicted RBP12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 TTC12Q9H892 705 aaPredicted RBP12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 PCDHB15Q9Y5E8 787 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 BIN1O00499 593 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 IVLP07476 585 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 LARP6Q9BRS8 491 aaKnown RBP12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 SEPT11Q9NVA2 429 aaKnown RBP12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 SLC52A1Q9NWF4 448 aa12.36□□□□□ -0.43
CLTCL1-209ENST00000617103 SYNJ2O15056 1496 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 FAM177BA6PVY3 158 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 TUBB4AP04350 444 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 MNAT1P51948 309 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 RAB3GAP1Q15042 981 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 BBXQ8WY36 941 aaPredicted RBP12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 CCDC196A0A1B0GTZ2 297 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 GBP2P32456 591 aaPredicted RBP12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 IFFO1Q0D2I5 559 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 SMC5Q8IY18 1101 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 CCDC12Q8WUD4 166 aaPredicted RBP12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 MCM10Q7L590 875 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 DNAAF4Q8WXU2 420 aa12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 PHAXQ9H814 394 aaKnown RBP12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 PRG4Q92954 1404 aaPredicted RBP12.35□□□□□ -0.43
CLTCL1-209ENST00000617103 SUPT6HQ7KZ85 1726 aaKnown RBP12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 BTBD11A6QL63 1104 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 GNAT3A8MTJ3 354 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 TMX1Q9H3N1 280 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 SPG7Q9UQ90 795 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 PTPRCP08575 1304 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 SLU7O95391 586 aaKnown RBP12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 NAA15Q9BXJ9 866 aaKnown RBP12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 CACNA2D4Q7Z3S7 1137 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 MIS18AQ9NYP9 233 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 RBM25P49756 843 aaKnown RBP12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 AIDAQ96BJ3 306 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 CCDC113Q9H0I3 377 aa12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 ZSCAN16Q9H4T2 348 aaPredicted RBP12.34□□□□□ -0.43
CLTCL1-209ENST00000617103 F6X3S4 739 aa12.33□□□□□ -0.43
CLTCL1-209ENST00000617103 IDH1O75874 414 aaKnown RBP12.33□□□□□ -0.43
CLTCL1-209ENST00000617103 CCDC175P0C221 793 aa12.33□□□□□ -0.43
CLTCL1-209ENST00000617103 EVI5LQ96CN4 794 aa12.33□□□□□ -0.43
CLTCL1-209ENST00000617103 MPHOSPH8Q99549 860 aa12.33□□□□□ -0.43
CLTCL1-209ENST00000617103 FEZ1Q99689 392 aa12.33□□□□□ -0.43
CLTCL1-209ENST00000617103 SRRTQ9BXP5 876 aaKnown RBP12.33□□□□□ -0.43
CLTCL1-209ENST00000617103 SPECC1Q5M775 1068 aa12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 SMAP1Q8IYB5 467 aaPredicted RBP12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 ZSWIM4Q9H7M6 989 aa12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 ANAPC15P60006 121 aa12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 SMC1AQ14683 1233 aaKnown RBP12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 GOLGA6L10A0A0M3HER8 536 aa12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 GTF2A1P52655 376 aaPredicted RBP12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 DNAI1Q9UI46 699 aa12.33□□□□□ -0.44
CLTCL1-209ENST00000617103 AQRO60306 1485 aaKnown RBP eCLIP12.33□□□□□ -0.443e-7■■■■■ 30.5
CLTCL1-209ENST00000617103 IL16Q14005 1332 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 CABP4P57796 275 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 ANO6Q4KMQ2 910 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 CYB5RLQ6IPT4 315 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 VPS36Q86VN1 386 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 TICAM2Q86XR7 235 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 SDSP20132 328 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 RRAGDQ9NQL2 400 aaPredicted RBP12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 CNPY2Q9Y2B0 182 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 FGFR1OPO95684 399 aaKnown RBP12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 ARHGAP45Q92619 1136 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 ALS2CR12Q96Q35 445 aa12.32□□□□□ -0.44
CLTCL1-209ENST00000617103 RPRD2Q5VT52 1461 aaKnown RBP12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 ATF3P18847 181 aa12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 CCT2P78371 535 aaKnown RBP12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 HLTFQ14527 1009 aaKnown RBP eCLIP12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 CCDC102BQ68D86 513 aa12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 TAF7Q15545 349 aaPredicted RBP12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 LARP1Q6PKG0 1096 aaKnown RBP12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 CCDC8Q9H0W5 538 aaPredicted RBP12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 BCCIPQ9P287 314 aaKnown RBP eCLIP12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 GCOM1H8Y6P7 765 aaPredicted RBP12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 MYZAPP0CAP1 466 aa12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 OGFRQ9NZT2 677 aa12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 HMG20BQ9P0W2 317 aa12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 AKAP2Q9Y2D5 859 aa12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 HECW1Q76N89 1606 aa12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 IFIT1P09914 478 aaKnown RBP12.31□□□□□ -0.44
CLTCL1-209ENST00000617103 CETN2P41208 172 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms