RNA–Protein interactions for RNA: ENST00000613916.1

PVT1-222, Transcript of Pvt1 oncogene, human

Gene PVT1, Length 137 nt, Biotype misc RNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-222	ENST00000613916	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	9.44	□□□□□ -0.9
PVT1-222	ENST00000613916	NLGN2	Q8NFZ4	835 aa		9.44	□□□□□ -0.9
PVT1-222	ENST00000613916	AKT1S1	Q96B36	256 aa		9.44	□□□□□ -0.9
PVT1-222	ENST00000613916	ZNF428	Q96B54	188 aa		9.44	□□□□□ -0.9
PVT1-222	ENST00000613916	CRBN	Q96SW2	442 aa		9.44	□□□□□ -0.9
PVT1-222	ENST00000613916	PPP4R2	Q9NY27	417 aa		9.44	□□□□□ -0.9
PVT1-222	ENST00000613916	TSPYL4	Q9UJ04	414 aa		9.44	□□□□□ -0.9
PVT1-222	ENST00000613916	TNN	Q9UQP3	1299 aa		9.44	□□□□□ -0.9
PVT1-222	ENST00000613916	LAMB4	A4D0S4	1761 aa		9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	PNPLA7	Q6ZV29	1317 aa		9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	EXOC5	O00471	708 aa		9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	ELL2	O00472	640 aa	Predicted RBP	9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	IL2RB	P14784	551 aa		9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	POLD1	P28340	1107 aa		9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	PDE3A	Q14432	1141 aa		9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	IFNL2	Q8IZJ0	200 aa		9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	MRPL50	Q8N5N7	158 aa	Known RBP	9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	LRRC4B	Q9NT99	713 aa		9.43	□□□□□ -0.9
PVT1-222	ENST00000613916	DOT1L	Q8TEK3	1739 aa		9.42	□□□□□ -0.9
PVT1-222	ENST00000613916	KCNQ3	O43525	872 aa		9.42	□□□□□ -0.9
PVT1-222	ENST00000613916	RLBP1	P12271	317 aa		9.42	□□□□□ -0.9
PVT1-222	ENST00000613916	ZCRB1	Q8TBF4	217 aa	Known RBP	9.42	□□□□□ -0.9
PVT1-222	ENST00000613916	SMC4	Q9NTJ3	1288 aa		9.42	□□□□□ -0.9
PVT1-222	ENST00000613916	LY75	O60449	1722 aa		9.42	□□□□□ -0.9
PVT1-222	ENST00000613916	HEG1	Q9ULI3	1381 aa		9.41	□□□□□ -0.9
PVT1-222	ENST00000613916	TEF	Q10587	303 aa		9.41	□□□□□ -0.9
PVT1-222	ENST00000613916	NKX1-1	Q15270	411 aa	Predicted RBP	9.41	□□□□□ -0.9
PVT1-222	ENST00000613916	SLC27A3	Q5K4L6	730 aa		9.41	□□□□□ -0.9
PVT1-222	ENST00000613916	PELP1	Q8IZL8	1130 aa	Known RBP	9.41	□□□□□ -0.9
PVT1-222	ENST00000613916	PANK1	Q8TE04	598 aa		9.41	□□□□□ -0.9
PVT1-222	ENST00000613916	FRAT1	Q92837	279 aa	Predicted RBP	9.41	□□□□□ -0.9
PVT1-222	ENST00000613916	GPBP1L1	Q9HC44	474 aa	Predicted RBP	9.41	□□□□□ -0.9
PVT1-222	ENST00000613916	PCDH11X	Q9BZA7	1347 aa		9.4	□□□□□ -0.9
PVT1-222	ENST00000613916	PCDH11Y	Q9BZA8	1340 aa		9.4	□□□□□ -0.9
PVT1-222	ENST00000613916	TCERG1	O14776	1098 aa	Known RBP	9.4	□□□□□ -0.9
PVT1-222	ENST00000613916	EIF4A1	P60842	406 aa	Known RBP	9.4	□□□□□ -0.9
PVT1-222	ENST00000613916	ZKSCAN2	Q63HK3	967 aa		9.4	□□□□□ -0.9
PVT1-222	ENST00000613916	KLHL34	Q8N239	644 aa		9.4	□□□□□ -0.9
PVT1-222	ENST00000613916	DCAF5	Q96JK2	942 aa		9.4	□□□□□ -0.9
PVT1-222	ENST00000613916	SLC52A2	Q9HAB3	445 aa		9.4	□□□□□ -0.9
PVT1-222	ENST00000613916	NOB1	Q9ULX3	412 aa	Known RBP	9.4	□□□□□ -0.9
PVT1-222	ENST00000613916	CIC	Q96RK0	1608 aa	Predicted RBP	9.39	□□□□□ -0.91
PVT1-222	ENST00000613916	SOS1	Q07889	1333 aa	Predicted RBP	9.39	□□□□□ -0.91
PVT1-222	ENST00000613916	KIF16B	Q96L93	1317 aa		9.39	□□□□□ -0.91
PVT1-222	ENST00000613916	BTBD11	A6QL63	1104 aa		9.39	□□□□□ -0.91
PVT1-222	ENST00000613916	HSP90AB1	P08238	724 aa	Known RBP	9.39	□□□□□ -0.91
PVT1-222	ENST00000613916	TRIM27	P14373	513 aa		9.39	□□□□□ -0.91
PVT1-222	ENST00000613916	B4GALNT3	Q6L9W6	998 aa		9.39	□□□□□ -0.91
PVT1-222	ENST00000613916	ATF7IP	Q6VMQ6	1270 aa		9.39	□□□□□ -0.91
PVT1-222	ENST00000613916	ACSBG1	Q96GR2	724 aa		9.39	□□□□□ -0.91
PVT1-222	ENST00000613916	NFATC2IP	Q8NCF5	419 aa		9.38	□□□□□ -0.91
PVT1-222	ENST00000613916	ARHGAP45	Q92619	1136 aa		9.38	□□□□□ -0.91
PVT1-222	ENST00000613916	COG6	Q9Y2V7	657 aa		9.38	□□□□□ -0.91
PVT1-222	ENST00000613916	KCP	Q6ZWJ8	1503 aa		9.37	□□□□□ -0.91
PVT1-222	ENST00000613916	CANX	P27824	592 aa	Known RBP	9.37	□□□□□ -0.91
PVT1-222	ENST00000613916	DZIP1L	Q8IYY4	767 aa	Known RBP	9.37	□□□□□ -0.91
PVT1-222	ENST00000613916	DNAJC5G	Q8N7S2	189 aa		9.37	□□□□□ -0.91
PVT1-222	ENST00000613916	CLUAP1	Q96AJ1	413 aa		9.37	□□□□□ -0.91
PVT1-222	ENST00000613916	ERVV-2	B6SEH9	535 aa		9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	KIF3C	O14782	793 aa		9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	IPO8	O15397	1037 aa	Known RBP	9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	HOXB7	P09629	217 aa		9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	APLP1	P51693	650 aa		9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	SLC39A6	Q13433	755 aa		9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	MVP	Q14764	893 aa	Known RBP	9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	ZNF790	Q6PG37	636 aa		9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	G2E3	Q7L622	706 aa		9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	DDX54	Q8TDD1	881 aa	Known RBP	9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	WDR90	Q96KV7	1748 aa		9.36	□□□□□ -0.91
PVT1-222	ENST00000613916	ABCC4	O15439	1325 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	SLC4A2	P04920	1241 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	MS4A1	P11836	297 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	TJP1	Q07157	1748 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	CCDC30	Q5VVM6	783 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	TMEM57	Q8N5G2	664 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	CCDC136	Q96JN2	1154 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	TFCP2L1	Q9NZI6	479 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	CD2AP	Q9Y5K6	639 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	AFDN	P55196	1824 aa	Known RBP	9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	ARFGEF2	Q9Y6D5	1785 aa		9.35	□□□□□ -0.91
PVT1-222	ENST00000613916	PCNT	O95613	3336 aa		9.34	□□□□□ -0.91
PVT1-222	ENST00000613916	PRAMEF22	A3QJZ6	481 aa		9.34	□□□□□ -0.91
PVT1-222	ENST00000613916	CABP4	P57796	275 aa		9.34	□□□□□ -0.91
PVT1-222	ENST00000613916	NECTIN2	Q92692	538 aa		9.34	□□□□□ -0.91
PVT1-222	ENST00000613916	ZNF496	Q96IT1	587 aa	Predicted RBP	9.34	□□□□□ -0.91
PVT1-222	ENST00000613916	PTPRC	P08575	1304 aa		9.33	□□□□□ -0.92
PVT1-222	ENST00000613916	HDGFL1	Q5TGJ6	251 aa		9.33	□□□□□ -0.92
PVT1-222	ENST00000613916	FTSJ3	Q8IY81	847 aa	Known RBP	9.33	□□□□□ -0.92
PVT1-222	ENST00000613916	ZNF526	Q8TF50	670 aa	Predicted RBP	9.33	□□□□□ -0.92
PVT1-222	ENST00000613916	API5	Q9BZZ5	524 aa	Known RBP	9.33	□□□□□ -0.92
PVT1-222	ENST00000613916	MYH14	Q7Z406	1995 aa	Known RBP	9.33	□□□□□ -0.92
PVT1-222	ENST00000613916	KDM2B	Q8NHM5	1336 aa		9.32	□□□□□ -0.92
PVT1-222	ENST00000613916	EIF2S2	P20042	333 aa	Known RBP	9.32	□□□□□ -0.92
PVT1-222	ENST00000613916	AAMP	Q13685	434 aa		9.32	□□□□□ -0.92
PVT1-222	ENST00000613916	INTS3	Q68E01	1043 aa	Known RBP	9.32	□□□□□ -0.92
PVT1-222	ENST00000613916	COL23A1	Q86Y22	540 aa	Predicted RBP	9.32	□□□□□ -0.92
PVT1-222	ENST00000613916	STK31	Q9BXU1	1019 aa		9.32	□□□□□ -0.92
PVT1-222	ENST00000613916	PCDHB15	Q9Y5E8	787 aa		9.32	□□□□□ -0.92
PVT1-222	ENST00000613916	ZNF831	Q5JPB2	1677 aa		9.32	□□□□□ -0.92
PVT1-222	ENST00000613916	COL5A3	P25940	1745 aa	Predicted RBP	9.31	□□□□□ -0.92

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms