RNA–Protein interactions for RNA: ENST00000613626.4

CDK13-207, Transcript of cyclin dependent kinase 13, humanhuman

TSL 5 BASIC

Gene CDK13, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-207ENST00000613626 MBIPQ9NS73 344 aa23.22■■□□□ 1.31
CDK13-207ENST00000613626 TNNT3P45378 269 aaPredicted RBP23.21■■□□□ 1.31
CDK13-207ENST00000613626 CAMK4Q16566 473 aa23.21■■□□□ 1.31
CDK13-207ENST00000613626 KRT24Q2M2I5 525 aa23.21■■□□□ 1.31
CDK13-207ENST00000613626 FUCA2Q9BTY2 467 aa23.21■■□□□ 1.31
CDK13-207ENST00000613626 TPM3P06753 285 aa23.21■■□□□ 1.31
CDK13-207ENST00000613626 MED14O60244 1454 aa23.2■■□□□ 1.31
CDK13-207ENST00000613626 VAMP4O75379 141 aa23.2■■□□□ 1.3
CDK13-207ENST00000613626 ANO2Q9NQ90 1003 aa23.2■■□□□ 1.3
CDK13-207ENST00000613626 C8orf58Q8NAV2 365 aa23.2■■□□□ 1.3
CDK13-207ENST00000613626 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
CDK13-207ENST00000613626 NOL10Q9BSC4 688 aaKnown RBP23.2■■□□□ 1.3
CDK13-207ENST00000613626 LRRC7Q96NW7 1537 aa23.2■■□□□ 1.3
CDK13-207ENST00000613626 IL16Q14005 1332 aa23.2■■□□□ 1.3
CDK13-207ENST00000613626 SYCP1Q15431 976 aa23.19■■□□□ 1.3
CDK13-207ENST00000613626 COG3Q96JB2 828 aa23.19■■□□□ 1.3
CDK13-207ENST00000613626 CEP135Q66GS9 1140 aa23.19■■□□□ 1.3
CDK13-207ENST00000613626 UBE2HP62256 183 aa23.18■■□□□ 1.3
CDK13-207ENST00000613626 NCBP3Q53F19 620 aaKnown RBP23.18■■□□□ 1.3
CDK13-207ENST00000613626 USP27XA6NNY8 438 aa23.18■■□□□ 1.3
CDK13-207ENST00000613626 RAD51AP2Q09MP3 1159 aa23.18■■□□□ 1.3
CDK13-207ENST00000613626 NEK11Q8NG66 645 aa23.17■■□□□ 1.3
CDK13-207ENST00000613626 TRIM5Q9C035 493 aa23.17■■□□□ 1.3
CDK13-207ENST00000613626 CCDC61Q9Y6R9 512 aa23.17■■□□□ 1.3
CDK13-207ENST00000613626 CEBPAP49715 358 aaPredicted RBP23.17■■□□□ 1.3
CDK13-207ENST00000613626 PRR36Q9H6K5 1346 aa23.17■■□□□ 1.3
CDK13-207ENST00000613626 ZSCAN25Q6NSZ9 544 aa23.16■■□□□ 1.3
CDK13-207ENST00000613626 RGS22Q8NE09 1264 aa23.16■■□□□ 1.3
CDK13-207ENST00000613626 CLTCQ00610 1675 aaKnown RBP23.16■■□□□ 1.3
CDK13-207ENST00000613626 SECISBP2LQ93073 1101 aaKnown RBP23.16■■□□□ 1.3
CDK13-207ENST00000613626 SLC26A8Q96RN1 970 aa23.16■■□□□ 1.3
CDK13-207ENST00000613626 PAXBP1Q9Y5B6 917 aa23.16■■□□□ 1.3
CDK13-207ENST00000613626 CKAP2LQ8IYA6 745 aa23.15■■□□□ 1.3
CDK13-207ENST00000613626 ZNF446Q9NWS9 450 aa23.15■■□□□ 1.3
CDK13-207ENST00000613626 TRMT1Q9NXH9 659 aaKnown RBP23.15■■□□□ 1.3
CDK13-207ENST00000613626 FAM135BQ49AJ0 1406 aa23.15■■□□□ 1.3
CDK13-207ENST00000613626 ARID5BQ14865 1188 aa23.15■■□□□ 1.3
CDK13-207ENST00000613626 CACTINQ8WUQ7 758 aaKnown RBP23.15■■□□□ 1.3
CDK13-207ENST00000613626 POLR3GO15318 223 aaPredicted RBP23.14■■□□□ 1.3
CDK13-207ENST00000613626 MCM2P49736 904 aa23.14■■□□□ 1.3
CDK13-207ENST00000613626 INTS4Q96HW7 963 aaKnown RBP23.14■■□□□ 1.3
CDK13-207ENST00000613626 RSPH14Q9UHP6 348 aa23.14■■□□□ 1.3
CDK13-207ENST00000613626 DNM1Q05193 864 aaKnown RBP23.14■■□□□ 1.29
CDK13-207ENST00000613626 TWISTNBQ3B726 338 aaPredicted RBP23.14■■□□□ 1.29
CDK13-207ENST00000613626 CCDC192P0DO97 292 aa23.13■■□□□ 1.29
CDK13-207ENST00000613626 CYP2C19P33261 490 aa23.13■■□□□ 1.29
CDK13-207ENST00000613626 SULT6B1Q6IMI4 303 aa23.13■■□□□ 1.29
CDK13-207ENST00000613626 RILPL2Q969X0 211 aa23.13■■□□□ 1.29
CDK13-207ENST00000613626 ABCC4O15439 1325 aa23.13■■□□□ 1.29
CDK13-207ENST00000613626 SYTL4Q96C24 671 aaPredicted RBP23.13■■□□□ 1.29
CDK13-207ENST00000613626 RPAP1Q9BWH6 1393 aaPredicted RBP23.13■■□□□ 1.29
CDK13-207ENST00000613626 MCM10Q7L590 875 aa23.12■■□□□ 1.29
CDK13-207ENST00000613626 ZSCAN22P10073 491 aaPredicted RBP23.12■■□□□ 1.29
CDK13-207ENST00000613626 MIS18AQ9NYP9 233 aa23.12■■□□□ 1.29
CDK13-207ENST00000613626 CPS1P31327 1500 aa23.12■■□□□ 1.29
CDK13-207ENST00000613626 CCDC144BQ3MJ40 725 aa23.12■■□□□ 1.29
CDK13-207ENST00000613626 CCDC144CPQ8IYA2 1237 aa23.12■■□□□ 1.29
CDK13-207ENST00000613626 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.11■■□□□ 1.29
CDK13-207ENST00000613626 MCCP23508 829 aa23.1■■□□□ 1.29
CDK13-207ENST00000613626 HSP90AB2PQ58FF8 381 aa23.1■■□□□ 1.29
CDK13-207ENST00000613626 TMEM87AQ8NBN3 555 aa23.1■■□□□ 1.29
CDK13-207ENST00000613626 SYT1P21579 422 aa23.1■■□□□ 1.29
CDK13-207ENST00000613626 GYS2P54840 703 aa23.1■■□□□ 1.29
CDK13-207ENST00000613626 GNAI1P63096 354 aa23.1■■□□□ 1.29
CDK13-207ENST00000613626 C10orf67Q8IYJ2 551 aa23.1■■□□□ 1.29
CDK13-207ENST00000613626 FAM200AQ8TCP9 573 aa23.1■■□□□ 1.29
CDK13-207ENST00000613626 ESYT1Q9BSJ8 1104 aa23.1■■□□□ 1.29
CDK13-207ENST00000613626 TRIM66O15016 1216 aa23.09■■□□□ 1.29
CDK13-207ENST00000613626 MAP2P11137 1827 aaKnown RBP23.09■■□□□ 1.29
CDK13-207ENST00000613626 STX6O43752 255 aa23.09■■□□□ 1.29
CDK13-207ENST00000613626 CPSF1Q10570 1443 aaKnown RBP23.09■■□□□ 1.29
CDK13-207ENST00000613626 ARHGAP45Q92619 1136 aa23.08■■□□□ 1.29
CDK13-207ENST00000613626 FAM53CQ9NYF3 392 aa23.08■■□□□ 1.29
CDK13-207ENST00000613626 MRVI1Q9Y6F6 885 aa23.08■■□□□ 1.29
CDK13-207ENST00000613626 LTKP29376 864 aa23.08■■□□□ 1.29
CDK13-207ENST00000613626 ANO6Q4KMQ2 910 aa23.08■■□□□ 1.29
CDK13-207ENST00000613626 ANKRD44Q8N8A2 993 aa23.08■■□□□ 1.29
CDK13-207ENST00000613626 CBX8Q9HC52 389 aa23.08■■□□□ 1.29
CDK13-207ENST00000613626 ROBO2Q9HCK4 1378 aa23.08■■□□□ 1.28
CDK13-207ENST00000613626 CEP85Q6P2H3 762 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 LRRN4CLQ8ND94 238 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 KNDC1Q76NI1 1749 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 TYRO3Q06418 890 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 EIF4A2Q14240 407 aaKnown RBP23.07■■□□□ 1.28
CDK13-207ENST00000613626 ERCC6LQ2NKX8 1250 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 CLIP2Q9UDT6 1046 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 DIP2BQ9P265 1576 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 EDC4Q6P2E9 1401 aaKnown RBP23.07■■□□□ 1.28
CDK13-207ENST00000613626 F13A1P00488 732 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 PDE1AP54750 535 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 PTPN14Q15678 1187 aa23.07■■□□□ 1.28
CDK13-207ENST00000613626 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.07■■□□□ 1.28
CDK13-207ENST00000613626 SYT10Q6XYQ8 523 aa23.06■■□□□ 1.28
CDK13-207ENST00000613626 KIF1BPQ96EK5 621 aa23.06■■□□□ 1.28
CDK13-207ENST00000613626 PTCH1Q13635 1447 aa23.06■■□□□ 1.28
CDK13-207ENST00000613626 ATP7BP35670 1465 aa23.06■■□□□ 1.28
CDK13-207ENST00000613626 ZNF75DP51815 510 aa23.06■■□□□ 1.28
CDK13-207ENST00000613626 ACEP12821 1306 aa23.06■■□□□ 1.28
CDK13-207ENST00000613626 ZNF853P0CG23 659 aa23.05■■□□□ 1.28
CDK13-207ENST00000613626 FAM173BQ6P4H8 233 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms