RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 SBF2Q86WG5 1849 aa10.42□□□□□ -0.74
TARDBP-213ENST00000611963 CYP27B1O15528 508 aa10.42□□□□□ -0.74
TARDBP-213ENST00000611963 IL2RBP14784 551 aa10.42□□□□□ -0.74
TARDBP-213ENST00000611963 PHKG2P15735 406 aa10.42□□□□□ -0.74
TARDBP-213ENST00000611963 TAF7Q15545 349 aaPredicted RBP10.42□□□□□ -0.74
TARDBP-213ENST00000611963 SSH1Q8WYL5 1049 aa10.42□□□□□ -0.74
TARDBP-213ENST00000611963 SMC4Q9NTJ3 1288 aa10.42□□□□□ -0.74
TARDBP-213ENST00000611963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.42□□□□□ -0.745e-10■■□□□ 13.1
TARDBP-213ENST00000611963 PLEKHG2Q9H7P9 1386 aa10.41□□□□□ -0.74
TARDBP-213ENST00000611963 CACNA1FO60840 1977 aa10.41□□□□□ -0.74
TARDBP-213ENST00000611963 VAMP4O75379 141 aa10.41□□□□□ -0.74
TARDBP-213ENST00000611963 TWISTNBQ3B726 338 aaPredicted RBP10.41□□□□□ -0.74
TARDBP-213ENST00000611963 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.41□□□□□ -0.74
TARDBP-213ENST00000611963 EXOC6Q8TAG9 804 aa10.41□□□□□ -0.74
TARDBP-213ENST00000611963 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
TARDBP-213ENST00000611963 CRBNQ96SW2 442 aa10.41□□□□□ -0.74
TARDBP-213ENST00000611963 TNNQ9UQP3 1299 aa10.41□□□□□ -0.74
TARDBP-213ENST00000611963 RREB1Q92766 1687 aa10.41□□□□□ -0.74
TARDBP-213ENST00000611963 PSDA5PKW4 1024 aaPredicted RBP10.4□□□□□ -0.74
TARDBP-213ENST00000611963 EXOC5O00471 708 aa10.4□□□□□ -0.74
TARDBP-213ENST00000611963 TCERG1O14776 1098 aaKnown RBP10.4□□□□□ -0.74
TARDBP-213ENST00000611963 CANXP27824 592 aaKnown RBP10.4□□□□□ -0.74
TARDBP-213ENST00000611963 TEFQ10587 303 aa10.4□□□□□ -0.74
TARDBP-213ENST00000611963 IFNL2Q8IZJ0 200 aa10.4□□□□□ -0.74
TARDBP-213ENST00000611963 FRAT1Q92837 279 aaPredicted RBP10.4□□□□□ -0.74
TARDBP-213ENST00000611963 TOGARAM1Q9Y4F4 1720 aa10.4□□□□□ -0.74
TARDBP-213ENST00000611963 PCDH11XQ9BZA7 1347 aa10.39□□□□□ -0.75
TARDBP-213ENST00000611963 PCDH11YQ9BZA8 1340 aa10.39□□□□□ -0.75
TARDBP-213ENST00000611963 NUP188Q5SRE5 1749 aa10.39□□□□□ -0.75
TARDBP-213ENST00000611963 MRC1P22897 1456 aa10.39□□□□□ -0.75
TARDBP-213ENST00000611963 KCNQ3O43525 872 aa10.39□□□□□ -0.75
TARDBP-213ENST00000611963 ERICH6BQ5W0A0 696 aa10.39□□□□□ -0.75
TARDBP-213ENST00000611963 ITGB4P16144 1822 aa10.38□□□□□ -0.75
TARDBP-213ENST00000611963 DDX54Q8TDD1 881 aaKnown RBP10.38□□□□□ -0.75
TARDBP-213ENST00000611963 PANK1Q8TE04 598 aa10.38□□□□□ -0.75
TARDBP-213ENST00000611963 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
TARDBP-213ENST00000611963 MS4A3Q96HJ5 214 aa10.38□□□□□ -0.75
TARDBP-213ENST00000611963 BCL11BQ9C0K0 894 aaPredicted RBP10.38□□□□□ -0.75
TARDBP-213ENST00000611963 BABAM1Q9NWV8 329 aa10.38□□□□□ -0.75
TARDBP-213ENST00000611963 RGPD3A6NKT7 1758 aaPredicted RBP10.37□□□□□ -0.75
TARDBP-213ENST00000611963 RGPD4Q7Z3J3 1758 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 BTBD11A6QL63 1104 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 MAP3K13O43283 966 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 KCNQ2O43526 872 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 HSP90AB1P08238 724 aaKnown RBP10.37□□□□□ -0.75
TARDBP-213ENST00000611963 RLBP1P12271 317 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 R3HDM1Q15032 1099 aaKnown RBP10.37□□□□□ -0.75
TARDBP-213ENST00000611963 ALDH1L2Q3SY69 923 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 MRPL50Q8N5N7 158 aaKnown RBP10.37□□□□□ -0.75
TARDBP-213ENST00000611963 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 DCAF5Q96JK2 942 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 SLC52A2Q9HAB3 445 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 PPP4R2Q9NY27 417 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 NOB1Q9ULX3 412 aaKnown RBP10.37□□□□□ -0.75
TARDBP-213ENST00000611963 C5P01031 1676 aa10.37□□□□□ -0.75
TARDBP-213ENST00000611963 PLSCR1O15162 318 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 POTEIP0CG38 1075 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 PYGBP11216 843 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 EIF4A1P60842 406 aaKnown RBP10.36□□□□□ -0.75
TARDBP-213ENST00000611963 SLC39A6Q13433 755 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 ZKSCAN2Q63HK3 967 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 B4GALNT3Q6L9W6 998 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 NECTIN2Q92692 538 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 ZNF428Q96B54 188 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 KIF12Q96FN5 646 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 NHSQ6T4R5 1651 aa10.36□□□□□ -0.75
TARDBP-213ENST00000611963 CABP4P57796 275 aa10.35□□□□□ -0.75
TARDBP-213ENST00000611963 NFATC2IPQ8NCF5 419 aa10.35□□□□□ -0.75
TARDBP-213ENST00000611963 CLUAP1Q96AJ1 413 aa10.35□□□□□ -0.75
TARDBP-213ENST00000611963 ACSBG1Q96GR2 724 aa10.35□□□□□ -0.75
TARDBP-213ENST00000611963 TRPC6Q9Y210 931 aa10.35□□□□□ -0.75
TARDBP-213ENST00000611963 LRP5O75197 1615 aa10.35□□□□□ -0.75
TARDBP-213ENST00000611963 DOT1LQ8TEK3 1739 aa10.35□□□□□ -0.75
TARDBP-213ENST00000611963 KIF16BQ96L93 1317 aa10.34□□□□□ -0.75
TARDBP-213ENST00000611963 PAPPAQ13219 1627 aa10.34□□□□□ -0.75
TARDBP-213ENST00000611963 TRIM27P14373 513 aa10.34□□□□□ -0.75
TARDBP-213ENST00000611963 BRPF1P55201 1214 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-213ENST00000611963 PDE3AQ14432 1141 aa10.34□□□□□ -0.75
TARDBP-213ENST00000611963 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-213ENST00000611963 ATF7IPQ6VMQ6 1270 aa10.34□□□□□ -0.75
TARDBP-213ENST00000611963 ANO8Q9HCE9 1232 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-213ENST00000611963 CIZ1Q9ULV3 898 aaPredicted RBP10.34□□□□□ -0.75
TARDBP-213ENST00000611963 COG6Q9Y2V7 657 aa10.34□□□□□ -0.75
TARDBP-213ENST00000611963 UBR2Q8IWV8 1755 aa10.34□□□□□ -0.75
TARDBP-213ENST00000611963 FTSJ3Q8IY81 847 aaKnown RBP10.33□□□□□ -0.76
TARDBP-213ENST00000611963 DZIP1LQ8IYY4 767 aaKnown RBP10.33□□□□□ -0.76
TARDBP-213ENST00000611963 ERVV-2B6SEH9 535 aa10.32□□□□□ -0.76
TARDBP-213ENST00000611963 IPO8O15397 1037 aaKnown RBP10.32□□□□□ -0.76
TARDBP-213ENST00000611963 EIF2S2P20042 333 aaKnown RBP10.32□□□□□ -0.76
TARDBP-213ENST00000611963 TXNRD1Q16881 649 aa10.32□□□□□ -0.76
TARDBP-213ENST00000611963 HDGFL1Q5TGJ6 251 aa10.32□□□□□ -0.76
TARDBP-213ENST00000611963 ZNF790Q6PG37 636 aa10.32□□□□□ -0.76
TARDBP-213ENST00000611963 G2E3Q7L622 706 aa10.32□□□□□ -0.76
TARDBP-213ENST00000611963 SOS1Q07889 1333 aaPredicted RBP10.32□□□□□ -0.76
TARDBP-213ENST00000611963 LAMB4A4D0S4 1761 aa10.31□□□□□ -0.76
TARDBP-213ENST00000611963 BTAF1O14981 1849 aa10.31□□□□□ -0.76
TARDBP-213ENST00000611963 HEG1Q9ULI3 1381 aa10.31□□□□□ -0.76
TARDBP-213ENST00000611963 PRAMEF22A3QJZ6 481 aa10.31□□□□□ -0.76
TARDBP-213ENST00000611963 CCDC30Q5VVM6 783 aa10.31□□□□□ -0.76
TARDBP-213ENST00000611963 TMEM57Q8N5G2 664 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms