RNA–Protein interactions for RNA: ENST00000611855.4

CDH4-202, Transcript of cadherin 4, humanhuman

TSL 5 BASIC

Gene CDH4, Length 3,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-202ENST00000611855 KIF24Q5T7B8 1368 aa13.22□□□□□ -0.29
CDH4-202ENST00000611855 LARGE1O95461 756 aa13.22□□□□□ -0.29
CDH4-202ENST00000611855 SYT1P21579 422 aa13.22□□□□□ -0.29
CDH4-202ENST00000611855 YEATS2Q9ULM3 1422 aa13.22□□□□□ -0.29
CDH4-202ENST00000611855 DNM1Q05193 864 aaKnown RBP13.21□□□□□ -0.29
CDH4-202ENST00000611855 CAMK4Q16566 473 aa13.21□□□□□ -0.29
CDH4-202ENST00000611855 FAM173BQ6P4H8 233 aa13.21□□□□□ -0.29
CDH4-202ENST00000611855 PLPPR3Q6T4P5 718 aa13.21□□□□□ -0.29
CDH4-202ENST00000611855 FAM184AQ8NB25 1140 aa13.21□□□□□ -0.29
CDH4-202ENST00000611855 INTS4Q96HW7 963 aaKnown RBP13.21□□□□□ -0.29
CDH4-202ENST00000611855 RPAP1Q9BWH6 1393 aaPredicted RBP13.21□□□□□ -0.29
CDH4-202ENST00000611855 VPS37CA5D8V6 355 aaPredicted RBP13.21□□□□□ -0.29
CDH4-202ENST00000611855 WASLO00401 505 aaPredicted RBP13.21□□□□□ -0.29
CDH4-202ENST00000611855 AK2P54819 239 aa13.21□□□□□ -0.29
CDH4-202ENST00000611855 CWC27Q6UX04 472 aaKnown RBP13.21□□□□□ -0.29
CDH4-202ENST00000611855 CCDC83Q8IWF9 413 aa13.21□□□□□ -0.29
CDH4-202ENST00000611855 KDM4AO75164 1064 aa13.21□□□□□ -0.3
CDH4-202ENST00000611855 FERMT3Q86UX7 667 aa13.21□□□□□ -0.3
CDH4-202ENST00000611855 ZSCAN22P10073 491 aaPredicted RBP13.2□□□□□ -0.3
CDH4-202ENST00000611855 KCNF1Q9H3M0 494 aa13.2□□□□□ -0.3
CDH4-202ENST00000611855 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDH4-202ENST00000611855 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
CDH4-202ENST00000611855 CPS1P31327 1500 aa13.2□□□□□ -0.3
CDH4-202ENST00000611855 STX6O43752 255 aa13.2□□□□□ -0.3
CDH4-202ENST00000611855 KIAA1524Q8TCG1 905 aa13.2□□□□□ -0.3
CDH4-202ENST00000611855 RTF1Q92541 710 aaKnown RBP13.2□□□□□ -0.3
CDH4-202ENST00000611855 STK31Q9BXU1 1019 aa13.2□□□□□ -0.3
CDH4-202ENST00000611855 SMC3Q9UQE7 1217 aa13.2□□□□□ -0.3
CDH4-202ENST00000611855 PTGS1P23219 599 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
CDH4-202ENST00000611855 UVSSAQ2YD98 709 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 SPTLC3Q9NUV7 552 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 SALL3Q9BXA9 1300 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 NPHP1O15259 732 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
CDH4-202ENST00000611855 RUFY3Q7L099 469 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 FLIIQ13045 1269 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 MTHFSDQ2M296 383 aaKnown RBP13.19□□□□□ -0.3
CDH4-202ENST00000611855 NECAB1Q8N987 351 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 OGFRQ9NZT2 677 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 SNX14Q9Y5W7 946 aa13.19□□□□□ -0.3
CDH4-202ENST00000611855 CDK12Q9NYV4 1490 aaPredicted RBP13.19□□□□□ -0.3
CDH4-202ENST00000611855 CASTP20810 708 aaKnown RBP13.18□□□□□ -0.3
CDH4-202ENST00000611855 NCBP1Q09161 790 aaKnown RBP13.18□□□□□ -0.3
CDH4-202ENST00000611855 HAP1P54257 671 aaPredicted RBP13.18□□□□□ -0.3
CDH4-202ENST00000611855 CHMP4AQ9BY43 222 aa13.18□□□□□ -0.3
CDH4-202ENST00000611855 ALKQ9UM73 1620 aa13.18□□□□□ -0.3
CDH4-202ENST00000611855 HSPA4P34932 840 aa13.18□□□□□ -0.3
CDH4-202ENST00000611855 ANAPC15P60006 121 aa13.18□□□□□ -0.3
CDH4-202ENST00000611855 LRMPQ12912 555 aa13.18□□□□□ -0.3
CDH4-202ENST00000611855 CKAP2LQ8IYA6 745 aa13.18□□□□□ -0.3
CDH4-202ENST00000611855 ANKRD7Q92527 254 aa13.18□□□□□ -0.3
CDH4-202ENST00000611855 F13A1P00488 732 aa13.17□□□□□ -0.3
CDH4-202ENST00000611855 UBE2HP62256 183 aa13.17□□□□□ -0.3
CDH4-202ENST00000611855 TCEANC2Q96MN5 208 aa13.17□□□□□ -0.3
CDH4-202ENST00000611855 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
CDH4-202ENST00000611855 TSPOAP1O95153 1857 aa13.17□□□□□ -0.3
CDH4-202ENST00000611855 GJB2P29033 226 aa13.17□□□□□ -0.3
CDH4-202ENST00000611855 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
CDH4-202ENST00000611855 MLH3Q9UHC1 1453 aa13.17□□□□□ -0.3
CDH4-202ENST00000611855 CPSF1Q10570 1443 aaKnown RBP13.16□□□□□ -0.3
CDH4-202ENST00000611855 ATP8B2P98198 1209 aa13.16□□□□□ -0.3
CDH4-202ENST00000611855 LUZP1Q86V48 1076 aa13.16□□□□□ -0.3
CDH4-202ENST00000611855 GOLGA6L6A8MZA4 724 aa13.16□□□□□ -0.3
CDH4-202ENST00000611855 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
CDH4-202ENST00000611855 FEZ1Q99689 392 aa13.16□□□□□ -0.3
CDH4-202ENST00000611855 TNNT1P13805 278 aa13.16□□□□□ -0.3
CDH4-202ENST00000611855 ADCK5Q3MIX3 580 aa13.16□□□□□ -0.3
CDH4-202ENST00000611855 TAF3Q5VWG9 929 aa13.16□□□□□ -0.3
CDH4-202ENST00000611855 KIAA0232Q92628 1395 aa13.16□□□□□ -0.3
CDH4-202ENST00000611855 MAP3K19Q56UN5 1328 aa13.15□□□□□ -0.3
CDH4-202ENST00000611855 CCDC186Q7Z3E2 898 aa13.15□□□□□ -0.3
CDH4-202ENST00000611855 ATP7BP35670 1465 aa13.15□□□□□ -0.3
CDH4-202ENST00000611855 UBTFL1P0CB47 393 aaPredicted RBP13.15□□□□□ -0.3
CDH4-202ENST00000611855 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.3
CDH4-202ENST00000611855 JAKMIP1Q96N16 626 aaKnown RBP13.15□□□□□ -0.3
CDH4-202ENST00000611855 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
CDH4-202ENST00000611855 NRBP1Q9UHY1 535 aa13.15□□□□□ -0.3
CDH4-202ENST00000611855 GNAI3P08754 354 aa13.15□□□□□ -0.31
CDH4-202ENST00000611855 IRX5P78411 483 aaPredicted RBP13.15□□□□□ -0.31
CDH4-202ENST00000611855 LIMCH1Q9UPQ0 1083 aa13.15□□□□□ -0.31
CDH4-202ENST00000611855 CLTCQ00610 1675 aaKnown RBP13.14□□□□□ -0.31
CDH4-202ENST00000611855 PRR36Q9H6K5 1346 aa13.14□□□□□ -0.31
CDH4-202ENST00000611855 EIF2S2P20042 333 aaKnown RBP13.14□□□□□ -0.31
CDH4-202ENST00000611855 PRPF40BQ6NWY9 871 aaKnown RBP13.14□□□□□ -0.31
CDH4-202ENST00000611855 CCDC112Q8NEF3 446 aa13.14□□□□□ -0.31
CDH4-202ENST00000611855 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
CDH4-202ENST00000611855 CTNNA3Q9UI47 895 aa13.14□□□□□ -0.31
CDH4-202ENST00000611855 ANXA1P04083 346 aa13.14□□□□□ -0.31
CDH4-202ENST00000611855 TPD52L1Q16890 204 aaPredicted RBP13.14□□□□□ -0.31
CDH4-202ENST00000611855 USP44Q9H0E7 712 aa13.14□□□□□ -0.31
CDH4-202ENST00000611855 TFIP11Q9UBB9 837 aaKnown RBP13.14□□□□□ -0.31
CDH4-202ENST00000611855 SGSM2O43147 1006 aa13.13□□□□□ -0.31
CDH4-202ENST00000611855 SRGAP3O43295 1099 aa13.13□□□□□ -0.31
CDH4-202ENST00000611855 PDIA4P13667 645 aaKnown RBP13.13□□□□□ -0.31
CDH4-202ENST00000611855 PTH1RQ03431 593 aa13.13□□□□□ -0.31
CDH4-202ENST00000611855 OS9Q13438 667 aaPredicted RBP13.13□□□□□ -0.31
CDH4-202ENST00000611855 RAD50Q92878 1312 aa13.13□□□□□ -0.31
CDH4-202ENST00000611855 LIG1P18858 919 aa13.13□□□□□ -0.31
CDH4-202ENST00000611855 TTC14Q96N46 770 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms