RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	FKBP5	Q13451	457 aa	Predicted RBP	19.98	■□□□□ 0.79
CAPN12-211	ENST00000601685	KDM4A	O75164	1064 aa		19.98	■□□□□ 0.79
CAPN12-211	ENST00000601685	KLHL34	Q8N239	644 aa		19.98	■□□□□ 0.79
CAPN12-211	ENST00000601685	TCHH	Q07283	1943 aa		19.98	■□□□□ 0.79
CAPN12-211	ENST00000601685	C17orf53	Q8N3J3	647 aa	Predicted RBP	19.97	■□□□□ 0.79
CAPN12-211	ENST00000601685	STK31	Q9BXU1	1019 aa		19.97	■□□□□ 0.79
CAPN12-211	ENST00000601685	FOXO3	O43524	673 aa		19.96	■□□□□ 0.79
CAPN12-211	ENST00000601685	TSC1	Q92574	1164 aa		19.96	■□□□□ 0.79
CAPN12-211	ENST00000601685	PEAK1	Q9H792	1746 aa		19.96	■□□□□ 0.79
CAPN12-211	ENST00000601685	TTC14	Q96N46	770 aa		19.96	■□□□□ 0.79
CAPN12-211	ENST00000601685	FUCA2	Q9BTY2	467 aa		19.96	■□□□□ 0.79
CAPN12-211	ENST00000601685	FLII	Q13045	1269 aa		19.95	■□□□□ 0.78
CAPN12-211	ENST00000601685	RTF1	Q92541	710 aa	Known RBP	19.95	■□□□□ 0.78
CAPN12-211	ENST00000601685	STX6	O43752	255 aa		19.95	■□□□□ 0.78
CAPN12-211	ENST00000601685	USP6	P35125	1406 aa		19.95	■□□□□ 0.78
CAPN12-211	ENST00000601685	RAD50	Q92878	1312 aa		19.95	■□□□□ 0.78
CAPN12-211	ENST00000601685	TMEM2	Q9UHN6	1383 aa		19.95	■□□□□ 0.78
CAPN12-211	ENST00000601685	SYT1	P21579	422 aa		19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	MTHFSD	Q2M296	383 aa	Known RBP	19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	PRDM10	Q9NQV6	1147 aa		19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	KIF3A	Q9Y496	699 aa		19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	SNX14	Q9Y5W7	946 aa		19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	XRN1	Q8IZH2	1706 aa	Known RBP	19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	MAP3K19	Q56UN5	1328 aa		19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	PLEKHG3	A1L390	1219 aa		19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	F13A1	P00488	732 aa		19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	LRRFIP2	Q9Y608	721 aa	Known RBP	19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	TNR	Q92752	1358 aa		19.94	■□□□□ 0.78
CAPN12-211	ENST00000601685	UTP14C	Q5TAP6	766 aa	Known RBP	19.93	■□□□□ 0.78
CAPN12-211	ENST00000601685	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	19.93	■□□□□ 0.78
CAPN12-211	ENST00000601685	AK2	P54819	239 aa		19.93	■□□□□ 0.78
CAPN12-211	ENST00000601685	LIMCH1	Q9UPQ0	1083 aa		19.93	■□□□□ 0.78
CAPN12-211	ENST00000601685	ATP6V1D	Q9Y5K8	247 aa		19.93	■□□□□ 0.78
CAPN12-211	ENST00000601685	SGSM2	O43147	1006 aa		19.92	■□□□□ 0.78
CAPN12-211	ENST00000601685	DMTN	Q08495	405 aa		19.92	■□□□□ 0.78
CAPN12-211	ENST00000601685	ADAMTS13	Q76LX8	1427 aa		19.92	■□□□□ 0.78
CAPN12-211	ENST00000601685	CCDC30	Q5VVM6	783 aa		19.92	■□□□□ 0.78
CAPN12-211	ENST00000601685	RUFY3	Q7L099	469 aa		19.92	■□□□□ 0.78
CAPN12-211	ENST00000601685	IL1RAPL2	Q9NP60	686 aa		19.92	■□□□□ 0.78
CAPN12-211	ENST00000601685	USP31	Q70CQ4	1352 aa		19.91	■□□□□ 0.78
CAPN12-211	ENST00000601685	SOS1	Q07889	1333 aa	Predicted RBP	19.91	■□□□□ 0.78
CAPN12-211	ENST00000601685	FIBP	O43427	364 aa		19.91	■□□□□ 0.78
CAPN12-211	ENST00000601685	ZSCAN20	P17040	1043 aa	Predicted RBP	19.91	■□□□□ 0.78
CAPN12-211	ENST00000601685	GIMAP6	Q6P9H5	292 aa		19.91	■□□□□ 0.78
CAPN12-211	ENST00000601685	NUTM1	Q86Y26	1132 aa		19.91	■□□□□ 0.78
CAPN12-211	ENST00000601685	KIAA1524	Q8TCG1	905 aa		19.91	■□□□□ 0.78
CAPN12-211	ENST00000601685	LSG1	Q9H089	658 aa	Known RBP	19.91	■□□□□ 0.78
CAPN12-211	ENST00000601685	SMC3	Q9UQE7	1217 aa		19.91	■□□□□ 0.78
CAPN12-211	ENST00000601685	TPRN	Q4KMQ1	711 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	TOPAZ1	Q8N9V7	1692 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	NALCN	Q8IZF0	1738 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	FAM208A	Q9UK61	1670 aa	Known RBP	19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	AP5Z1	O43299	807 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	TPM3	P06753	285 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	PI4K2B	Q8TCG2	481 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	SSH3	Q8TE77	659 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	RAB11FIP3	O75154	756 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	RASEF	Q8IZ41	740 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	USP44	Q9H0E7	712 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	BCL2L12	Q9HB09	334 aa		19.9	■□□□□ 0.78
CAPN12-211	ENST00000601685	RIMS1	Q86UR5	1692 aa	Known RBP	19.89	■□□□□ 0.78
CAPN12-211	ENST00000601685	KCNF1	Q9H3M0	494 aa		19.89	■□□□□ 0.77
CAPN12-211	ENST00000601685	MAP4K4	O95819	1239 aa	Predicted RBP	19.89	■□□□□ 0.77
CAPN12-211	ENST00000601685	LTK	P29376	864 aa		19.89	■□□□□ 0.77
CAPN12-211	ENST00000601685	UBR1	Q8IWV7	1749 aa		19.88	■□□□□ 0.77
CAPN12-211	ENST00000601685	N4BP2	Q86UW6	1770 aa	Predicted RBP	19.88	■□□□□ 0.77
CAPN12-211	ENST00000601685	UBTFL1	P0CB47	393 aa	Predicted RBP	19.88	■□□□□ 0.77
CAPN12-211	ENST00000601685	LARP6	Q9BRS8	491 aa	Known RBP	19.88	■□□□□ 0.77
CAPN12-211	ENST00000601685	DIAPH3	Q9NSV4	1193 aa		19.88	■□□□□ 0.77
CAPN12-211	ENST00000601685	PXDNL	A1KZ92	1463 aa		19.88	■□□□□ 0.77
CAPN12-211	ENST00000601685	PLCB2	Q00722	1185 aa		19.88	■□□□□ 0.77
CAPN12-211	ENST00000601685	SLC26A8	Q96RN1	970 aa		19.88	■□□□□ 0.77
CAPN12-211	ENST00000601685	PYCARD	Q9ULZ3	195 aa		19.88	■□□□□ 0.77
CAPN12-211	ENST00000601685	FAM177B	A6PVY3	158 aa		19.87	■□□□□ 0.77
CAPN12-211	ENST00000601685	PPP4R3B	Q5MIZ7	849 aa		19.87	■□□□□ 0.77
CAPN12-211	ENST00000601685	KDR	P35968	1356 aa		19.86	■□□□□ 0.77
CAPN12-211	ENST00000601685	DNM1	Q05193	864 aa	Known RBP	19.86	■□□□□ 0.77
CAPN12-211	ENST00000601685	CNTROB	Q8N137	903 aa		19.86	■□□□□ 0.77
CAPN12-211	ENST00000601685	MTMR6	Q9Y217	621 aa		19.86	■□□□□ 0.77
CAPN12-211	ENST00000601685	CBX1	P83916	185 aa		19.86	■□□□□ 0.77
CAPN12-211	ENST00000601685	POLA2	Q14181	598 aa		19.86	■□□□□ 0.77
CAPN12-211	ENST00000601685	RHPN1	Q8TCX5	695 aa		19.86	■□□□□ 0.77
CAPN12-211	ENST00000601685	NECTIN2	Q92692	538 aa		19.86	■□□□□ 0.77
CAPN12-211	ENST00000601685	FLT4	P35916	1363 aa		19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	SURF6	O75683	361 aa	Known RBP	19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	LARGE1	O95461	756 aa		19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	ATP2B3	Q16720	1220 aa		19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	EYA1	Q99502	592 aa		19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	HYPK	Q9NX55	129 aa		19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	GOLGA6L6	A8MZA4	724 aa		19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	HTATSF1	O43719	755 aa	Known RBP	19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	GJB2	P29033	226 aa		19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	CHAF1A	Q13111	956 aa	Predicted RBP	19.85	■□□□□ 0.77
CAPN12-211	ENST00000601685	RIOK3	O14730	519 aa	Known RBP	19.84	■□□□□ 0.77
CAPN12-211	ENST00000601685	AMPH	P49418	695 aa		19.84	■□□□□ 0.77
CAPN12-211	ENST00000601685	PPP1R42	Q7Z4L9	355 aa		19.84	■□□□□ 0.77
CAPN12-211	ENST00000601685	SBNO1	A3KN83	1393 aa		19.84	■□□□□ 0.77
CAPN12-211	ENST00000601685	LRRC37A3	O60309	1634 aa		19.84	■□□□□ 0.77
CAPN12-211	ENST00000601685	CCDC192	P0DO97	292 aa		19.84	■□□□□ 0.77

Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms