RNA–Protein interactions for RNA: ENST00000597596.1

FARP1-221, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-221ENST00000597596 VSIG10Q8N0Z9 540 aa8.14□□□□□ -1.11
FARP1-221ENST00000597596 RTF1Q92541 710 aaKnown RBP8.14□□□□□ -1.11
FARP1-221ENST00000597596 BCL2L12Q9HB09 334 aa8.14□□□□□ -1.11
FARP1-221ENST00000597596 NARFQ9UHQ1 456 aa8.14□□□□□ -1.11
FARP1-221ENST00000597596 TBC1D2BQ9UPU7 963 aa8.14□□□□□ -1.11
FARP1-221ENST00000597596 USP16Q9Y5T5 823 aa8.14□□□□□ -1.11
FARP1-221ENST00000597596 COL24A1Q17RW2 1714 aa8.14□□□□□ -1.11
FARP1-221ENST00000597596 MYH14Q7Z406 1995 aaKnown RBP8.13□□□□□ -1.11
FARP1-221ENST00000597596 PRAMEF22A3QJZ6 481 aa8.13□□□□□ -1.11
FARP1-221ENST00000597596 POLRMTO00411 1230 aaKnown RBP8.13□□□□□ -1.11
FARP1-221ENST00000597596 GIGYF1O75420 1035 aaPredicted RBP8.13□□□□□ -1.11
FARP1-221ENST00000597596 PIP4K2AP48426 406 aaPredicted RBP8.13□□□□□ -1.11
FARP1-221ENST00000597596 DDX10Q13206 875 aaKnown RBP8.13□□□□□ -1.11
FARP1-221ENST00000597596 CCDC24Q8N4L8 307 aa8.13□□□□□ -1.11
FARP1-221ENST00000597596 SENP3-EIF4A1A0A087X0R7 540 aa8.12□□□□□ -1.11
FARP1-221ENST00000597596 SERPINB2P05120 415 aa8.12□□□□□ -1.11
FARP1-221ENST00000597596 EIF5P55010 431 aaKnown RBP8.12□□□□□ -1.11
FARP1-221ENST00000597596 FMNL2Q96PY5 1086 aa8.12□□□□□ -1.11
FARP1-221ENST00000597596 TEX13AQ9BXU3 409 aaPredicted RBP8.12□□□□□ -1.11
FARP1-221ENST00000597596 PIM2Q9P1W9 311 aa8.12□□□□□ -1.11
FARP1-221ENST00000597596 COL3A1P02461 1466 aaPredicted RBP8.12□□□□□ -1.11
FARP1-221ENST00000597596 CHD4Q14839 1912 aa8.11□□□□□ -1.11
FARP1-221ENST00000597596 A0A087WZG4 1122 aa8.11□□□□□ -1.11
FARP1-221ENST00000597596 TAF7Q15545 349 aaPredicted RBP8.11□□□□□ -1.11
FARP1-221ENST00000597596 DALRD3Q5D0E6 543 aaKnown RBP8.11□□□□□ -1.11
FARP1-221ENST00000597596 TBC1D9BQ66K14 1250 aa8.11□□□□□ -1.11
FARP1-221ENST00000597596 GPBP1L1Q9HC44 474 aaPredicted RBP8.11□□□□□ -1.11
FARP1-221ENST00000597596 ATP10DQ9P241 1426 aa8.11□□□□□ -1.11
FARP1-221ENST00000597596 HEG1Q9ULI3 1381 aa8.1□□□□□ -1.11
FARP1-221ENST00000597596 C9orf131Q5VYM1 1079 aa8.1□□□□□ -1.11
FARP1-221ENST00000597596 NPM2Q86SE8 214 aaKnown RBP8.1□□□□□ -1.11
FARP1-221ENST00000597596 C2CD5Q86YS7 1000 aa8.1□□□□□ -1.11
FARP1-221ENST00000597596 NGEFQ8N5V2 710 aa8.1□□□□□ -1.11
FARP1-221ENST00000597596 THUMPD2Q9BTF0 503 aaKnown RBP8.1□□□□□ -1.11
FARP1-221ENST00000597596 ZNF219Q9P2Y4 722 aaPredicted RBP8.1□□□□□ -1.11
FARP1-221ENST00000597596 CICQ96RK0 1608 aaPredicted RBP8.1□□□□□ -1.11
FARP1-221ENST00000597596 SCN11AQ9UI33 1791 aa8.1□□□□□ -1.11
FARP1-221ENST00000597596 COL15A1P39059 1388 aa8.1□□□□□ -1.11
FARP1-221ENST00000597596 PXDNLA1KZ92 1463 aa8.09□□□□□ -1.11
FARP1-221ENST00000597596 HTATSF1O43719 755 aaKnown RBP8.09□□□□□ -1.11
FARP1-221ENST00000597596 NEFMP07197 916 aa8.09□□□□□ -1.11
FARP1-221ENST00000597596 SNRPA1P09661 255 aaKnown RBP8.09□□□□□ -1.11
FARP1-221ENST00000597596 IL6STP40189 918 aaPredicted RBP8.09□□□□□ -1.11
FARP1-221ENST00000597596 PLEKHF1Q96S99 279 aa8.09□□□□□ -1.11
FARP1-221ENST00000597596 CEMIPQ8WUJ3 1361 aa8.09□□□□□ -1.12
FARP1-221ENST00000597596 KCPQ6ZWJ8 1503 aa8.08□□□□□ -1.12
FARP1-221ENST00000597596 FAM177BA6PVY3 158 aa8.08□□□□□ -1.12
FARP1-221ENST00000597596 NBPF26B4DH59 902 aa8.08□□□□□ -1.12
FARP1-221ENST00000597596 H0YIN7 160 aa8.08□□□□□ -1.12
FARP1-221ENST00000597596 CAMTA2O94983 1202 aa8.08□□□□□ -1.12
FARP1-221ENST00000597596 NBPF10Q6P3W6 841 aaKnown RBP8.08□□□□□ -1.12
FARP1-221ENST00000597596 DZIP3Q86Y13 1208 aaKnown RBP8.08□□□□□ -1.12
FARP1-221ENST00000597596 NBPF15Q8N660 670 aa8.08□□□□□ -1.12
FARP1-221ENST00000597596 ZNF622Q969S3 477 aaKnown RBP eCLIP8.08□□□□□ -1.12
FARP1-221ENST00000597596 SETDB2Q96T68 719 aa8.08□□□□□ -1.12
FARP1-221ENST00000597596 C10orf71Q711Q0 1435 aa8.08□□□□□ -1.12
FARP1-221ENST00000597596 NPHP1O15259 732 aa8.07□□□□□ -1.12
FARP1-221ENST00000597596 RALBP1Q15311 655 aa8.07□□□□□ -1.12
FARP1-221ENST00000597596 NFE2L2Q16236 605 aa8.07□□□□□ -1.12
FARP1-221ENST00000597596 TTLL6Q8N841 843 aa8.07□□□□□ -1.12
FARP1-221ENST00000597596 RRP7AQ9Y3A4 280 aaKnown RBP8.07□□□□□ -1.12
FARP1-221ENST00000597596 N4BP2Q86UW6 1770 aaPredicted RBP8.07□□□□□ -1.12
FARP1-221ENST00000597596 COL5A3P25940 1745 aaPredicted RBP8.06□□□□□ -1.12
FARP1-221ENST00000597596 TJP1Q07157 1748 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 ZNF831Q5JPB2 1677 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 KIF3CO14782 793 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 RIPK4P57078 832 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 NEUROD2Q15784 382 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 HLFQ16534 295 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 PRR5LQ6MZQ0 368 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 CCDC146Q8IYE0 955 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 PNNQ9H307 717 aaKnown RBP8.06□□□□□ -1.12
FARP1-221ENST00000597596 NMRK2Q9NPI5 230 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 RNF181Q9P0P0 153 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 C4AP0C0L4 1744 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 MRC1P22897 1456 aa8.06□□□□□ -1.12
FARP1-221ENST00000597596 MAPK8IP3Q9UPT6 1336 aa8.05□□□□□ -1.12
FARP1-221ENST00000597596 C21orf2O43822 256 aa8.05□□□□□ -1.12
FARP1-221ENST00000597596 MYL6BP14649 208 aa8.05□□□□□ -1.12
FARP1-221ENST00000597596 PDE6BP35913 854 aa8.05□□□□□ -1.12
FARP1-221ENST00000597596 PRELPP51888 382 aa8.05□□□□□ -1.12
FARP1-221ENST00000597596 EIF4A1P60842 406 aaKnown RBP8.05□□□□□ -1.12
FARP1-221ENST00000597596 RASSF7Q02833 373 aa8.05□□□□□ -1.12
FARP1-221ENST00000597596 BRIP1Q9BX63 1249 aa8.05□□□□□ -1.12
FARP1-221ENST00000597596 RRAGCQ9HB90 399 aa8.05□□□□□ -1.12
FARP1-221ENST00000597596 EIF2S2P20042 333 aaKnown RBP8.04□□□□□ -1.12
FARP1-221ENST00000597596 NBPF5PQ86XG9 351 aaPredicted RBP8.04□□□□□ -1.12
FARP1-221ENST00000597596 MIER1Q8N108 512 aa8.04□□□□□ -1.12
FARP1-221ENST00000597596 CNBD1Q8NA66 436 aa8.04□□□□□ -1.12
FARP1-221ENST00000597596 PNISRQ8TF01 805 aaKnown RBP8.04□□□□□ -1.12
FARP1-221ENST00000597596 NIP7Q9Y221 180 aaKnown RBP eCLIP8.04□□□□□ -1.12
FARP1-221ENST00000597596 ADCY9O60503 1353 aa8.04□□□□□ -1.12
FARP1-221ENST00000597596 CARMIL3Q8ND23 1372 aa8.04□□□□□ -1.12
FARP1-221ENST00000597596 GTF2E1P29083 439 aaPredicted RBP8.03□□□□□ -1.12
FARP1-221ENST00000597596 TMPOP42166 694 aaKnown RBP8.03□□□□□ -1.12
FARP1-221ENST00000597596 ST5P78524 1137 aa8.03□□□□□ -1.12
FARP1-221ENST00000597596 CLEC4GQ6UXB4 293 aa8.03□□□□□ -1.12
FARP1-221ENST00000597596 TPTE2Q6XPS3 522 aa8.03□□□□□ -1.12
FARP1-221ENST00000597596 TTLL7Q6ZT98 887 aa8.03□□□□□ -1.12
FARP1-221ENST00000597596 NECTIN2Q92692 538 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms