RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 RAD50Q92878 1312 aa15□□□□□ -0.01
PDE4A-207ENST00000590407 TRIM6-TRIM34B2RNG4 842 aa15□□□□□ -0.01
PDE4A-207ENST00000590407 HSP90AA2PQ14568 343 aaPredicted RBP15□□□□□ -0.01
PDE4A-207ENST00000590407 CCDC39Q9UFE4 941 aa15□□□□□ -0.01
PDE4A-207ENST00000590407 ZKSCAN5Q9Y2L8 839 aa15□□□□□ -0.01
PDE4A-207ENST00000590407 SGSM2O43147 1006 aa14.99□□□□□ -0.01
PDE4A-207ENST00000590407 HSP90AB4PQ58FF6 505 aa14.99□□□□□ -0.01
PDE4A-207ENST00000590407 TSHZ3Q63HK5 1081 aa14.99□□□□□ -0.01
PDE4A-207ENST00000590407 PI4K2BQ8TCG2 481 aa14.99□□□□□ -0.01
PDE4A-207ENST00000590407 RILPL2Q969X0 211 aa14.99□□□□□ -0.01
PDE4A-207ENST00000590407 KIF1BPQ96EK5 621 aa14.99□□□□□ -0.01
PDE4A-207ENST00000590407 SYCE3A1L190 88 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 NUTM2FA1L443 756 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 CSPP1Q1MSJ5 1256 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 GLIPR1L2Q4G1C9 344 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 KIAA1211Q6ZU35 1233 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.98□□□□□ -0.01
PDE4A-207ENST00000590407 UVSSAQ2YD98 709 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 HDGFL1Q5TGJ6 251 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 UNC5CLQ8IV45 518 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 FAM184AQ8NB25 1140 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 TTC14Q96N46 770 aa14.98□□□□□ -0.01
PDE4A-207ENST00000590407 NSFL1CQ9UNZ2 370 aaKnown RBP14.98□□□□□ -0.01
PDE4A-207ENST00000590407 ADGRL3Q9HAR2 1447 aa14.97□□□□□ -0.01
PDE4A-207ENST00000590407 KDM3BQ7LBC6 1761 aa14.97□□□□□ -0.01
PDE4A-207ENST00000590407 SOX12O15370 315 aa14.97□□□□□ -0.01
PDE4A-207ENST00000590407 NLRP6P59044 892 aa14.97□□□□□ -0.01
PDE4A-207ENST00000590407 RHPN1Q8TCX5 695 aa14.97□□□□□ -0.01
PDE4A-207ENST00000590407 SLC26A8Q96RN1 970 aa14.97□□□□□ -0.01
PDE4A-207ENST00000590407 TSPY26PQ9H489 355 aa14.97□□□□□ -0.01
PDE4A-207ENST00000590407 TTC41PQ6P2S7 1318 aa14.96□□□□□ -0.01
PDE4A-207ENST00000590407 MTX1Q13505 466 aa14.96□□□□□ -0.01
PDE4A-207ENST00000590407 PPP1R42Q7Z4L9 355 aa14.96□□□□□ -0.01
PDE4A-207ENST00000590407 RPAP1Q9BWH6 1393 aaPredicted RBP14.96□□□□□ -0.01
PDE4A-207ENST00000590407 PHRF1Q9P1Y6 1649 aaKnown RBP14.96□□□□□ -0.01
PDE4A-207ENST00000590407 LETM1O95202 739 aaPredicted RBP14.96□□□□□ -0.02
PDE4A-207ENST00000590407 CNTROBQ8N137 903 aa14.96□□□□□ -0.02
PDE4A-207ENST00000590407 LSG1Q9H089 658 aaKnown RBP14.96□□□□□ -0.02
PDE4A-207ENST00000590407 KCNB2Q92953 911 aa14.95□□□□□ -0.02
PDE4A-207ENST00000590407 OVOS2A0A0G2JMS6 1433 aa14.94□□□□□ -0.02
PDE4A-207ENST00000590407 SURF6O75683 361 aaKnown RBP14.94□□□□□ -0.02
PDE4A-207ENST00000590407 EIF4A1P60842 406 aaKnown RBP14.94□□□□□ -0.02
PDE4A-207ENST00000590407 BEND3Q5T5X7 828 aa14.94□□□□□ -0.02
PDE4A-207ENST00000590407 SNX14Q9Y5W7 946 aa14.94□□□□□ -0.02
PDE4A-207ENST00000590407 LMO7Q8WWI1 1683 aa14.94□□□□□ -0.02
PDE4A-207ENST00000590407 UPF3BQ9BZI7 483 aaKnown RBP14.93□□□□□ -0.02
PDE4A-207ENST00000590407 IL25Q9H293 177 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 LIMCH1Q9UPQ0 1083 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 HDAC5Q9UQL6 1122 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.93□□□□□ -0.02
PDE4A-207ENST00000590407 LMTK3Q96Q04 1460 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 GLRX3O76003 335 aaKnown RBP14.93□□□□□ -0.02
PDE4A-207ENST00000590407 ZSCAN22P10073 491 aaPredicted RBP14.93□□□□□ -0.02
PDE4A-207ENST00000590407 PDIA4P13667 645 aaKnown RBP14.93□□□□□ -0.02
PDE4A-207ENST00000590407 DNAAF4Q8WXU2 420 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 IP6K1Q92551 441 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 CHAMP1Q96JM3 812 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 TM6SF1Q9BZW5 370 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 PDCL3Q9H2J4 239 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 IL1RAPL2Q9NP60 686 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 ATP6V1DQ9Y5K8 247 aa14.93□□□□□ -0.02
PDE4A-207ENST00000590407 NFAT5O94916 1531 aa14.92□□□□□ -0.02
PDE4A-207ENST00000590407 NCAPD2Q15021 1401 aa14.92□□□□□ -0.02
PDE4A-207ENST00000590407 CCDC183Q5T5S1 534 aa14.92□□□□□ -0.02
PDE4A-207ENST00000590407 USP48Q86UV5 1035 aa14.92□□□□□ -0.02
PDE4A-207ENST00000590407 NUTM1Q86Y26 1132 aa14.92□□□□□ -0.02
PDE4A-207ENST00000590407 RUFY2Q8WXA3 655 aa14.92□□□□□ -0.02
PDE4A-207ENST00000590407 PHAXQ9H814 394 aaKnown RBP14.92□□□□□ -0.02
PDE4A-207ENST00000590407 SRGAP3O43295 1099 aa14.91□□□□□ -0.02
PDE4A-207ENST00000590407 FOXD4L5Q5VV16 416 aaPredicted RBP14.91□□□□□ -0.02
PDE4A-207ENST00000590407 THEMISQ8N1K5 641 aaPredicted RBP14.91□□□□□ -0.02
PDE4A-207ENST00000590407 FOXD4L4Q8WXT5 416 aaPredicted RBP14.91□□□□□ -0.02
PDE4A-207ENST00000590407 MAP7D2Q96T17 732 aa14.91□□□□□ -0.02
PDE4A-207ENST00000590407 ALDH1L1O75891 902 aa14.9□□□□□ -0.02
PDE4A-207ENST00000590407 UBE2HP62256 183 aa14.9□□□□□ -0.02
PDE4A-207ENST00000590407 NECTIN2Q92692 538 aa14.9□□□□□ -0.02
PDE4A-207ENST00000590407 ZSCAN31Q96LW9 406 aaPredicted RBP14.9□□□□□ -0.02
PDE4A-207ENST00000590407 LTN1O94822 1766 aa14.9□□□□□ -0.02
PDE4A-207ENST00000590407 ERC1Q8IUD2 1116 aa14.9□□□□□ -0.02
PDE4A-207ENST00000590407 SH2B1Q9NRF2 756 aaPredicted RBP14.9□□□□□ -0.02
PDE4A-207ENST00000590407 CHD2O14647 1828 aaKnown RBP14.89□□□□□ -0.03
PDE4A-207ENST00000590407 STX6O43752 255 aa14.89□□□□□ -0.03
PDE4A-207ENST00000590407 GADD45BO75293 160 aaPredicted RBP14.89□□□□□ -0.03
PDE4A-207ENST00000590407 AK2P54819 239 aa14.89□□□□□ -0.03
PDE4A-207ENST00000590407 VPS53Q5VIR6 699 aa14.89□□□□□ -0.03
PDE4A-207ENST00000590407 RUFY3Q7L099 469 aa14.89□□□□□ -0.03
PDE4A-207ENST00000590407 ADCY9O60503 1353 aa14.89□□□□□ -0.03
PDE4A-207ENST00000590407 NBPF7P0C2Y1 421 aaPredicted RBP14.88□□□□□ -0.03
PDE4A-207ENST00000590407 ABTB2Q8N961 1025 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 SNRKQ9NRH2 765 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 HEG1Q9ULI3 1381 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 PI4KAP2A4QPH2 592 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 F13A1P00488 732 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 AKAP4Q5JQC9 854 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 NOL8Q76FK4 1167 aaKnown RBP14.88□□□□□ -0.03
PDE4A-207ENST00000590407 RASEFQ8IZ41 740 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 PI4KAP1Q8N8J0 262 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 GPATCH3Q96I76 525 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 CHPF2Q9P2E5 772 aa14.88□□□□□ -0.03
PDE4A-207ENST00000590407 SMC3Q9UQE7 1217 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms