RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 IPO8O15397 1037 aaKnown RBP19.4■□□□□ 0.7
DDX39A-211ENST00000590239 SLC4A2P04920 1241 aa19.4■□□□□ 0.7
DDX39A-211ENST00000590239 DNAJC10Q8IXB1 793 aa19.4■□□□□ 0.7
DDX39A-211ENST00000590239 NECTIN2Q92692 538 aa19.4■□□□□ 0.7
DDX39A-211ENST00000590239 DDX21Q9NR30 783 aaKnown RBP eCLIP19.4■□□□□ 0.7
DDX39A-211ENST00000590239 CACNA1FO60840 1977 aa19.39■□□□□ 0.7
DDX39A-211ENST00000590239 ATP6V1AP38606 617 aa19.39■□□□□ 0.69
DDX39A-211ENST00000590239 HYPKQ9NX55 129 aa19.39■□□□□ 0.69
DDX39A-211ENST00000590239 CHPF2Q9P2E5 772 aa19.39■□□□□ 0.69
DDX39A-211ENST00000590239 TJP1Q07157 1748 aa19.39■□□□□ 0.69
DDX39A-211ENST00000590239 LY75O60449 1722 aa19.38■□□□□ 0.69
DDX39A-211ENST00000590239 CYP19A1P11511 503 aaPredicted RBP19.38■□□□□ 0.69
DDX39A-211ENST00000590239 ARHGAP45Q92619 1136 aa19.38■□□□□ 0.69
DDX39A-211ENST00000590239 PDIA6Q15084 440 aa19.37■□□□□ 0.69
DDX39A-211ENST00000590239 ZKSCAN2Q63HK3 967 aa19.37■□□□□ 0.69
DDX39A-211ENST00000590239 FRAT1Q92837 279 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-211ENST00000590239 NOB1Q9ULX3 412 aaKnown RBP19.37■□□□□ 0.69
DDX39A-211ENST00000590239 PTPRCP08575 1304 aa19.36■□□□□ 0.69
DDX39A-211ENST00000590239 PLSCR1O15162 318 aa19.36■□□□□ 0.69
DDX39A-211ENST00000590239 HMGB2P26583 209 aaKnown RBP19.36■□□□□ 0.69
DDX39A-211ENST00000590239 CANXP27824 592 aaKnown RBP19.36■□□□□ 0.69
DDX39A-211ENST00000590239 ITPK1Q13572 414 aa19.36■□□□□ 0.69
DDX39A-211ENST00000590239 CCNL1Q9UK58 526 aaPredicted RBP19.36■□□□□ 0.69
DDX39A-211ENST00000590239 APBA3O96018 575 aa19.35■□□□□ 0.69
DDX39A-211ENST00000590239 SLC27A3Q5K4L6 730 aa19.35■□□□□ 0.69
DDX39A-211ENST00000590239 TNS1Q9HBL0 1735 aaKnown RBP19.34■□□□□ 0.69
DDX39A-211ENST00000590239 NBPF26B4DH59 902 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 PLIN1O60240 522 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 A1BGP04217 495 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 MS4A1P11836 297 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 FLIIQ13045 1269 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 PDE3AQ14432 1141 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 PROSER3Q2NL68 480 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 NBPF14Q5TI25 921 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 NBPF10Q6P3W6 841 aaKnown RBP19.34■□□□□ 0.69
DDX39A-211ENST00000590239 ATF7IPQ6VMQ6 1270 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 G2E3Q7L622 706 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 NBPF15Q8N660 670 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 API5Q9BZZ5 524 aaKnown RBP19.34■□□□□ 0.69
DDX39A-211ENST00000590239 EP400Q96L91 3159 aa19.34■□□□□ 0.69
DDX39A-211ENST00000590239 LRP10Q7Z4F1 713 aa19.33■□□□□ 0.68
DDX39A-211ENST00000590239 CCDC87Q9NVE4 849 aa19.33■□□□□ 0.68
DDX39A-211ENST00000590239 CNTNAP4Q9C0A0 1308 aa19.32■□□□□ 0.68
DDX39A-211ENST00000590239 COL5A3P25940 1745 aaPredicted RBP19.32■□□□□ 0.68
DDX39A-211ENST00000590239 ANXA1P04083 346 aa19.32■□□□□ 0.68
DDX39A-211ENST00000590239 MYL6BP14649 208 aa19.32■□□□□ 0.68
DDX39A-211ENST00000590239 CRKLP46109 303 aaKnown RBP19.32■□□□□ 0.68
DDX39A-211ENST00000590239 RC3H1Q5TC82 1133 aaKnown RBP19.32■□□□□ 0.68
DDX39A-211ENST00000590239 INTS5Q6P9B9 1019 aaKnown RBP19.32■□□□□ 0.68
DDX39A-211ENST00000590239 LINC00116Q8NCU8 138 aa19.32■□□□□ 0.68
DDX39A-211ENST00000590239 RREB1Q92766 1687 aa19.32■□□□□ 0.68
DDX39A-211ENST00000590239 NEFLP07196 543 aa19.31■□□□□ 0.68
DDX39A-211ENST00000590239 TRIM27P14373 513 aa19.31■□□□□ 0.68
DDX39A-211ENST00000590239 PHAXQ9H814 394 aaKnown RBP19.31■□□□□ 0.68
DDX39A-211ENST00000590239 RGPD3A6NKT7 1758 aaPredicted RBP19.31■□□□□ 0.68
DDX39A-211ENST00000590239 RGPD4Q7Z3J3 1758 aa19.31■□□□□ 0.68
DDX39A-211ENST00000590239 IL6STP40189 918 aaPredicted RBP19.3■□□□□ 0.68
DDX39A-211ENST00000590239 FKBP5Q13451 457 aaPredicted RBP19.3■□□□□ 0.68
DDX39A-211ENST00000590239 TXNRD1Q16881 649 aa19.3■□□□□ 0.68
DDX39A-211ENST00000590239 CCDC125Q86Z20 511 aa19.3■□□□□ 0.68
DDX39A-211ENST00000590239 DDX58O95786 925 aaKnown RBP19.29■□□□□ 0.68
DDX39A-211ENST00000590239 KCNQ4P56696 695 aa19.29■□□□□ 0.68
DDX39A-211ENST00000590239 SF3B2Q13435 895 aaKnown RBP19.29■□□□□ 0.68
DDX39A-211ENST00000590239 DZIP1LQ8IYY4 767 aaKnown RBP19.29■□□□□ 0.68
DDX39A-211ENST00000590239 XAGE3Q8WTP9 111 aa19.29■□□□□ 0.68
DDX39A-211ENST00000590239 LRRC4BQ9NT99 713 aa19.29■□□□□ 0.68
DDX39A-211ENST00000590239 ZBTB1Q9Y2K1 713 aa19.29■□□□□ 0.68
DDX39A-211ENST00000590239 PIP4K2AP48426 406 aaPredicted RBP19.28■□□□□ 0.68
DDX39A-211ENST00000590239 COPS6Q7L5N1 327 aa19.28■□□□□ 0.68
DDX39A-211ENST00000590239 PROM2Q8N271 834 aa19.28■□□□□ 0.68
DDX39A-211ENST00000590239 TAF1LQ8IZX4 1826 aa19.28■□□□□ 0.68
DDX39A-211ENST00000590239 ABCC4O15439 1325 aa19.27■□□□□ 0.68
DDX39A-211ENST00000590239 EIF5P55010 431 aaKnown RBP19.27■□□□□ 0.68
DDX39A-211ENST00000590239 FTSJ3Q8IY81 847 aaKnown RBP19.27■□□□□ 0.68
DDX39A-211ENST00000590239 AIMP1Q12904 312 aaKnown RBP19.26■□□□□ 0.67
DDX39A-211ENST00000590239 C20orf194Q5TEA3 1177 aa19.26■□□□□ 0.67
DDX39A-211ENST00000590239 KSR2Q6VAB6 950 aa19.26■□□□□ 0.67
DDX39A-211ENST00000590239 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
DDX39A-211ENST00000590239 MYH14Q7Z406 1995 aaKnown RBP19.25■□□□□ 0.67
DDX39A-211ENST00000590239 RPS6KA4O75676 772 aa19.25■□□□□ 0.67
DDX39A-211ENST00000590239 RLBP1P12271 317 aa19.25■□□□□ 0.67
DDX39A-211ENST00000590239 BAG6P46379 1132 aa19.25■□□□□ 0.67
DDX39A-211ENST00000590239 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
DDX39A-211ENST00000590239 PANK1Q8TE04 598 aa19.25■□□□□ 0.67
DDX39A-211ENST00000590239 CLUAP1Q96AJ1 413 aa19.25■□□□□ 0.67
DDX39A-211ENST00000590239 CAMKK2Q96RR4 588 aa19.25■□□□□ 0.67
DDX39A-211ENST00000590239 C4BP0C0L5 1744 aa19.25■□□□□ 0.67
DDX39A-211ENST00000590239 PXDNLA1KZ92 1463 aa19.24■□□□□ 0.67
DDX39A-211ENST00000590239 ADCY9O60503 1353 aa19.24■□□□□ 0.67
DDX39A-211ENST00000590239 PI4KAP2A4QPH2 592 aa19.24■□□□□ 0.67
DDX39A-211ENST00000590239 ANKRD13DQ6ZTN6 518 aa19.24■□□□□ 0.67
DDX39A-211ENST00000590239 PI4KAP1Q8N8J0 262 aa19.24■□□□□ 0.67
DDX39A-211ENST00000590239 PLBD2Q8NHP8 589 aa19.24■□□□□ 0.67
DDX39A-211ENST00000590239 A0A087WZG4 1122 aa19.23■□□□□ 0.67
DDX39A-211ENST00000590239 F6X3S4 739 aa19.23■□□□□ 0.67
DDX39A-211ENST00000590239 CCT4P50991 539 aaKnown RBP19.23■□□□□ 0.67
DDX39A-211ENST00000590239 INTS3Q68E01 1043 aaKnown RBP19.23■□□□□ 0.67
DDX39A-211ENST00000590239 RIC3Q7Z5B4 369 aa19.23■□□□□ 0.67
DDX39A-211ENST00000590239 DNAAF4Q8WXU2 420 aa19.23■□□□□ 0.67
DDX39A-211ENST00000590239 IRX6P78412 446 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms